Plant Circular RNA Database

Detail information of Os06g0677400_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os06g0677400_circ_g.3
					
						ID in PlantcircBase
						osa_circ_031994
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr6: 28139544-28141890  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os06g0677400						
					
						Parent gene annotation
						
							3-hydroxyisobutyrate dehydrogenase domain containing protein. (O
s06t0677400-01);Similar to 3-hydroxyisobutyrate dehydrogenase. (
Os06t0677400-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os06g0677400_circ_g.1 Os06g0677400_circ_g.2 Os06g0677400_circ_g.4 Os06g0677400_circ_g.5 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os06t0677400-02:8
Os06t0677400-01:9

General Information
CircRNA Name	Os06g0677400_circ_g.3
ID in PlantcircBase	osa_circ_031994
Alias	NA
Organism	Oryza sativa
Position	chr6: 28139544-28141890 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	CIRCexplorer
Parent gene	Os06g0677400
Parent gene annotation	3-hydroxyisobutyrate dehydrogenase domain containing protein. (O s06t0677400-01);Similar to 3-hydroxyisobutyrate dehydrogenase. ( Os06t0677400-02)
Parent gene strand	+
Alternative splicing	Os06g0677400_circ_g.1 Os06g0677400_circ_g.2 Os06g0677400_circ_g.4 Os06g0677400_circ_g.5
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os06t0677400-02:8 Os06t0677400-01:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCTTTTATGTTCTTTTGCAGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGG
CTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATcgaatatttggccagtaaagcgaaagtg
aagggtttgcaaatcggctagcagttcagagaaaatgggggttgttggatggagggttcgttcg
atggtcca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1003
Transcript exons: 28139544-28139704,28139902-28139990,28140158-28140272,28
140536-28140686,28140872-28140954,28141077-28141172,2814
1268-28141410,28141511-28141595,28141811-28141890
CGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAAT
GGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGC
CTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGG
GTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGA
GAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCC
AAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATG
GACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCAC
AGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAG
AAAGCCTATGCTGAAAAACCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAG
AAGCTGGGAAACTCACTTTCATGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTT
ACTTCTCTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAG
ATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTC
AGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTG
GAGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTAT
GATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTG
GAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAAT
Transcript length: 1125
Transcript exons: 28139544-28139704,28139902-28139990,28140158-28140272,28
140536-28140686,28140872-28141172,28141268-28141410,2814
1511-28141595,28141811-28141890
CGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAAT
GGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGC
CTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGG
GTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGA
GAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCC
AAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATG
GACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCAC
AGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAG
AAAGCCTATGCTGAAAAACCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAG
AAGCTGGGAAACTCACTTTCATGGTATTCAATCCTTGCTTTTTCGTAACTTTGGTGTTATCACC
AGGAATATACTTTGGTCGGACAGTTGCTACATTAGATGGAAGGATTTCTGTCTTATTTTGGTGC
AAAGGAATGATATATAGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCT
CTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGT
AACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATC
TCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGGAGCAG
TGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGT
GGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTG
GCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAAT
						
					

						Genomic sequence
						
							CGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAAT
GGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGC
CTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGGTATCCTTTCTATCTTCTGTTCTTCGTTGCG
GTATCGAAATGCTAAGATATCATTTTTACAGCTGTGCTTGTACTGTACCAGCTTGAATTTGACC
AGAGCATGGTTAAAAGGGAGGAGGGCAAAATATTTGTTCTTCTTTTTTTTTTGACGCGTCACTG
TATTGGTTTTCATGTGAGTTGTTGATACTTCTTCTCAGAATGTAGGATTCATAGGACTGGGAAA
TATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTG
TAAGTCCTTGCATATTTTCATTTTGGCAATTTTTTTTGTAGTCAAAGGTTTTTATTCTCCAAGT
TTAGTTTGTTTATCAAGGAACTTATAAATATAAGCCTTCTGTCCCAGTATAATACAATGTTCTA
TGTTTGCCATCCAATGACCATTGAATATGTGATATCAGCAATGAGAATACCATGAAGAAATTCT
CGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAAT
TACGATGCTGCCTTCGTCTGCCCATGTAAGCTGGTTGAACCATGATATCCCCTTCTTTTCAATT
CCTTTTACACTCTTAGTCTCTTACTACCTAGTTAGATCATGATATCAGAGAGTAATACCCTCGC
ATGTCCCGCATGTAGAAATCTGTATACCGTAGCTTGTTGCTGCATCGAACTTTTGCTCTAGAAT
TCTTAAAGAGATGGTGATGTATGAGTATTGTAGGTCAAAACTTTAAAAAACCCCTTTAGAATAT
TAAAATCTTACGTGTTCACAGATGTTTTTCAGGTATTAGATGTATACAATGGACGGAATGGTTT
GCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAA
ACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGGTTATATAT
TATAATAGCATATTAACCATGATTTGCTATTAGAAGTTCAAAACTTGGATAGTTGAATATATTG
TATGTGGGAAAGATGGAGCAAAAGCTTCTTCATCTTTTAGCCCCGACAACAATTAAAACTGAAG
TATATCTGAATATTTAAGGTGGTAATGTCACCTTTTGTGTATTTCCAGCCTATGCTGAAAAACC
GATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTTC
ATGGTATTCAATCCTTGCTTTTTCGTAACTTTGGTGTTATCACCAGGAATATACTTTGGTCGGA
CAGTTGCTACATTAGATGGAAGGATTTCTGTCTTATTTTGGTGCAAAGGAATGATATATAGGTA
GGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATGGGCAAAAAAACAA
TATATTGTGGCGGGGCTGGAAATGGCTCGGTAAGTTTTAGTAACTCTAGCTCTTCATTAAGATC
TCTTCAAAACTGTTTGTGTACAGATGATTCAAGCTCACTTTTGATGCTCTATTTTTCAAGGTTG
CAAAGATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCT
TGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGC
TGCTGGAGCAGGTATTGTGTGCTCTTCACCTGTCCTTTGTGGTTTGGGTTGCAGTTGACTTACA
GGTTGAATAATCTGAAGTTTGCGTGCCCTTTCTATTGACTTAAACAGTGACACATATAACCCAG
TTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGTGGTTTCACCTCCAAACT
AATGGTATGATGCCAAGATACAGTACTCTCTGCTACATCAAATTAGTCATTGATTGTCAAAGAC
TGAGTTGTTGTGTCCTAAAAATTATAATTTTCTTCTCAACTGATTGGTAACCGATTAACCATTA
CTTTTATTCTTGAAGATATATAAAGAACAGAATTAGAACTATCTACACATTATCAGATCAAAGT
AATTTAATCTTTTATGTTCTTTTGCAGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTG
GAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAAT
						
					

			
		

Sequences
Splice junction sequence	TCTTTTATGTTCTTTTGCAGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGG CTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATcgaatatttggccagtaaagcgaaagtg aagggtttgcaaatcggctagcagttcagagaaaatgggggttgttggatggagggttcgttcg atggtcca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1003 Transcript exons: 28139544-28139704,28139902-28139990,28140158-28140272,28 140536-28140686,28140872-28140954,28141077-28141172,2814 1268-28141410,28141511-28141595,28141811-28141890 CGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAAT GGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGC CTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGG GTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGA GAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCC AAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATG GACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCAC AGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAG AAAGCCTATGCTGAAAAACCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAG AAGCTGGGAAACTCACTTTCATGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTT ACTTCTCTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAG ATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTC AGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTG GAGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTAT GATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTG GAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAAT Transcript length: 1125 Transcript exons: 28139544-28139704,28139902-28139990,28140158-28140272,28 140536-28140686,28140872-28141172,28141268-28141410,2814 1511-28141595,28141811-28141890 CGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAAT GGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGC CTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGG GTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGA GAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCC AAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATG GACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCAC AGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAG AAAGCCTATGCTGAAAAACCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAG AAGCTGGGAAACTCACTTTCATGGTATTCAATCCTTGCTTTTTCGTAACTTTGGTGTTATCACC AGGAATATACTTTGGTCGGACAGTTGCTACATTAGATGGAAGGATTTCTGTCTTATTTTGGTGC AAAGGAATGATATATAGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCT CTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGT AACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATC TCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGGAGCAG TGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGT GGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTG GCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAAT
Genomic sequence	CGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAAT GGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGC CTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGGTATCCTTTCTATCTTCTGTTCTTCGTTGCG GTATCGAAATGCTAAGATATCATTTTTACAGCTGTGCTTGTACTGTACCAGCTTGAATTTGACC AGAGCATGGTTAAAAGGGAGGAGGGCAAAATATTTGTTCTTCTTTTTTTTTTGACGCGTCACTG TATTGGTTTTCATGTGAGTTGTTGATACTTCTTCTCAGAATGTAGGATTCATAGGACTGGGAAA TATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTG TAAGTCCTTGCATATTTTCATTTTGGCAATTTTTTTTGTAGTCAAAGGTTTTTATTCTCCAAGT TTAGTTTGTTTATCAAGGAACTTATAAATATAAGCCTTCTGTCCCAGTATAATACAATGTTCTA TGTTTGCCATCCAATGACCATTGAATATGTGATATCAGCAATGAGAATACCATGAAGAAATTCT CGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAAT TACGATGCTGCCTTCGTCTGCCCATGTAAGCTGGTTGAACCATGATATCCCCTTCTTTTCAATT CCTTTTACACTCTTAGTCTCTTACTACCTAGTTAGATCATGATATCAGAGAGTAATACCCTCGC ATGTCCCGCATGTAGAAATCTGTATACCGTAGCTTGTTGCTGCATCGAACTTTTGCTCTAGAAT TCTTAAAGAGATGGTGATGTATGAGTATTGTAGGTCAAAACTTTAAAAAACCCCTTTAGAATAT TAAAATCTTACGTGTTCACAGATGTTTTTCAGGTATTAGATGTATACAATGGACGGAATGGTTT GCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAA ACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGGTTATATAT TATAATAGCATATTAACCATGATTTGCTATTAGAAGTTCAAAACTTGGATAGTTGAATATATTG TATGTGGGAAAGATGGAGCAAAAGCTTCTTCATCTTTTAGCCCCGACAACAATTAAAACTGAAG TATATCTGAATATTTAAGGTGGTAATGTCACCTTTTGTGTATTTCCAGCCTATGCTGAAAAACC GATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTTC ATGGTATTCAATCCTTGCTTTTTCGTAACTTTGGTGTTATCACCAGGAATATACTTTGGTCGGA CAGTTGCTACATTAGATGGAAGGATTTCTGTCTTATTTTGGTGCAAAGGAATGATATATAGGTA GGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATGGGCAAAAAAACAA TATATTGTGGCGGGGCTGGAAATGGCTCGGTAAGTTTTAGTAACTCTAGCTCTTCATTAAGATC TCTTCAAAACTGTTTGTGTACAGATGATTCAAGCTCACTTTTGATGCTCTATTTTTCAAGGTTG CAAAGATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCT TGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGC TGCTGGAGCAGGTATTGTGTGCTCTTCACCTGTCCTTTGTGGTTTGGGTTGCAGTTGACTTACA GGTTGAATAATCTGAAGTTTGCGTGCCCTTTCTATTGACTTAAACAGTGACACATATAACCCAG TTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGTGGTTTCACCTCCAAACT AATGGTATGATGCCAAGATACAGTACTCTCTGCTACATCAAATTAGTCATTGATTGTCAAAGAC TGAGTTGTTGTGTCCTAAAAATTATAATTTTCTTCTCAACTGATTGGTAACCGATTAACCATTA CTTTTATTCTTGAAGATATATAAAGAACAGAATTAGAACTATCTACACATTATCAGATCAAAGT AATTTAATCTTTTATGTTCTTTTGCAGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTG GAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.234831398

Conservation Information
Conserved circRNAs	NA
PMCS	0.234831398

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							28139607-28139589(+)
						
						Potential amino acid sequence
						
							MGVVGWRVRSMVQHLGWNCRRGLSSAAVQSQLENVGFIGLGNMGAHMARNLVMAGYKVTVHDVN
ENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVYNGRNGLLANGGCLGPWLYIDSS
TVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKP
LLLSMGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQNLGIKASVLTDIFNCSSARC
WSSDTYNPVPGVMMDVPSSRNYDGGFTSKLMTKDLDLAMASASGVGFNCPFGSQALEIEYLASK
AKVKGLQIG*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	28139607-28139589(+)
Potential amino acid sequence	MGVVGWRVRSMVQHLGWNCRRGLSSAAVQSQLENVGFIGLGNMGAHMARNLVMAGYKVTVHDVN ENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVYNGRNGLLANGGCLGPWLYIDSS TVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKP LLLSMGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQNLGIKASVLTDIFNCSSARC WSSDTYNPVPGVMMDVPSSRNYDGGFTSKLMTKDLDLAMASASGVGFNCPFGSQALEIEYLASK AKVKGLQIG*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os06g0677400_circ_g.3

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