Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT3G05030_circ_g.5 |
ID in PlantcircBase | ath_circ_019769 |
Alias | 3:1394987-1395605 |
Organism | Arabidpsis thaliana |
Position | chr3: 1394987-1395605 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT3G05030 |
Parent gene annotation |
Sodium/hydrogen exchanger |
Parent gene strand | - |
Alternative splicing | AT3G05030_circ_g.4 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT3G05030.3:4 AT3G05030.4:4 AT3G05030.1:4 AT3G05030.2:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.219691618 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |