Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0278550_circ_g.6 |
ID in PlantcircBase | osa_circ_023265 |
Alias | NA |
Organism | Oryza sativa |
Position | chr4: 11767566-11781078 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ui-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os04g0278550 |
Parent gene annotation |
Hypothetical protein. (Os04t0278550-00) |
Parent gene strand | - |
Alternative splicing | Os04g0278200_circ_g.1 Os04g0278550_circ_g.1 Os04g0278550_circ_g.2 Os04g0278550_circ_g.3 Os04g0278550_circ_g.4 Os04g0278550_circ_g.5 Os04g0278550_circ_g.7 Os04g0278550_circ_g.8 Os04g0278550_circ_g.9 Os04g0278550_circ_g.10 Os04g0278550_circ_g.11 Os04g0278550_circ_g.12 Os04g0278550_circ_g.13 Os04g0278550_circ_g.14 Os04g0278550_circ_g.15 Os04g0278550_circ_g.16 Os04g0278550_circ_g.17 Os04g0278550_circ_g.18 Os04g0278550_circ_g.19 |
Support reads | 1 |
Tissues | shoot |
Exon boundary | Yes-No |
Splicing signals | GC-AG |
Number of exons covered | Os04t0278200-01:8 Os04t0278200-02:8 Os04t0278550-00:5 Os04t0278200-01:8 Os04t0278200-02:8 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.089804884 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | osa-miR2866 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |