Detail information of BGIOSGA031781_circ_g.1


General Information
CircRNA Name BGIOSGA031781_circ_g.1
ID in PlantcircBase osi_circ_008454
Alias Chr10:18740458_18744495(ZS97RS2), Chr10:18348057_18352094(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr10: 15221199-15224020  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ei-circRNA
Identification method CIRI2, CIRI2
Parent gene BGIOSGA031781
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA031781_circ_g.2
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   NN-CA
Number of exons covered BGIOSGA031781-TA:5
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CGTCGGAGCGAGCGGCGAGCGGCAGCGGCGGAGCGGCGCGGCAGCAGCACCGCCAGCGTCGGAG
CGAGCGGCGACGGCAGCGCGGACGGCGCGCAGCAACccttcatcgaacacaactgatgatccca
cccggaaatcgagctgcttttgatgcttcttccttcgacgttcgtcaaactcctcccaaccgtc
cacctgtt
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CCTTCATCGAACACAACTGATGATCCCACCCGGAAATCGAGCTGCTTTTGATGCTTCTTCCTTC
GACGTTCGTCAAACTCCTCCCAACCGTCCACCTGTTTTCCACAAGTAAAAACTGGCATTAGCAG
TGGCAAGGTTGAAATGTCTCCATCAGAGCCAGGACCAATGAAAGCAACCGCTAGCAAATAAACG
ACTTATCCGCCTTTTTCGCAACGGAAAGGTAAATATATGGTGGAAATCCCAACTTAGGTGAAAA
CTTGTGTAAACCCAAGCCCAAAAAAGTCGTCTAAATTCATCAAAATAAATCACACATGTAGATG
GACACGAGTTGTCACCTAAGTTGGGGTTTTCACCACATGTTTACCCGGAACTATATAACTTGAT
CAACGTTGTGGGTATTATGTATTATGTATTTAACGTGGTGGGTATCAACTTTGGCGTCCCAAAA
AGTGAAACCAATAGGCTATTTAAGAGAGTGATTACTGAACTGTCCAGGTCTTAAGCATATGCTG
GTAGCTATCTTAATTCAGTAGAGTACTGACCATAACAAAGTAACAAACACTAAATAACTGTGAA
GCCTTGGGTCACTTAGGTCACTTATACCTGCCGAAGAACGTCGTTTGTGATTTCAGTGCCATGG
AGATCAAGTGTAATGAGCTGCGAGCATTTTATGAAGAAAGCTGAAGGTAGGGATGTAAGACCAT
TGTTCCGTACACTCAAAGCCTGATGGAATAAAGTTATTTTGAAAAAAGGAACATTAGAAACTGA
TGACAGTACAATGTAACTGATTATTACACCCATGCTAGACAAAAGAAAAAATATTGAATGGAAA
AAAAATATCACCATAAAGGAAAGCACAAATAACCATCTGCTCTGACATAAATAATATACAGTGA
ACAACTAGAAGCAGCAGGATAGTAAATCTTTTGACCAAGTTTAGCTAGTAATGCTATAGTTTAA
TAACGATCTGGTGCAATAATCATATACTCCCTCCAGTCAAAAATATCTGTTGTTTAGGACAAGG
TTTGGTCAAACAATTAAAATTCCGACAAAAATATTTTTGACCGGAGGGAGTATAACAAATGAAC
GATAAATACTCATGACTCTCTCAACTGTCAAGTCATAAGCCAAAACTTTGTCCACCGTATGCTG
ATAATAAATAAAAAATTAAGTTCAAACTGAACCTGCAGGCTACATGATACCACAAAATTGCATG
GAATGTTTCACGCTGACTACTCACATATCAGGTTTGTTGTGGCATTACTGTTGTGCGAAATAAT
ATTTTTATATGTTCATTGGTTATGAACATGCAACTTAAACTTCCTTAAAATGGGGGAGTAAGCA
TGTAGTTGTACCATCTTGAACCAAGGGCACTAGTAATATCTTGTTTCAATGCTAGGAACAAGAT
AGCTTAGAAGTATGCATGCAGATTTAGTCTTTTATTAAGGAATATATTTCTCCATGTGTGGCCC
ATAGGCACATACCTTGAGATGTTGAAGGTTTCCAAAAGCCTCTGGCAGTTCAGCCAAAAGATTT
GATGACAAATCAACCTAATGAAATTAAAAATTTTGATGAACCAGAAATTGCCATATGGAAACTC
AGAAGAGCTAAGTGCTCAGTATGGCCTAGAACTAGAAGGAAAACTGAAACAGAAATAAAGCACA
CACCTCATTGAGAGATTCACAACCACCTATAGATGAAGGCAATGAAGTTATCCTGCCAACAAGT
GAAATTGTAGCAGTGTGGAAGTCAGGATACCTTTCAATTCTCAAAAAAAAAGTAATCATGTAAA
TTCTCATTAGAAGTATAAGAAAAGACATATTTTCTGGCTTGATAGAATACATTTTCTTTAAAAG
TTTTTCTATAATGGAACTGCTCACAGGCTGAAAGTCTCACATGATTGTGAAAAATCTATCAACA
ACTATATTATATACAGAAATCCTCTCTTGAGGTAACTCTTCACATTAGCACAAAGTGTAAATTA
TGCTATAAGCATAGCAAAAAAATGAGACTTCAATGAGTCACTTCAGTTAAGCACTAGTAGCACA
GTACCTATTATTATTTGCTATCAGAATCTCAAGATGCTTCAGTAACCCTATTTCAACAGGTAAG
TTCTCAAGCCTGTTATTTGCAATACGAAGTTCACGTAAATGAGTTATTGAGCCCAAACTTGAAG
GTAAAGTGACCAGCCTGCATGAAAAATTATAAATTTAGAACATATCATCTCGTCATCTTCAATT
CTAAACAATAATGGCGGACATGAAACTTCCTAATGGATAAAGACCTAAGGTCTACTGTGCCTTG
CCAGCAGGCCCATAATCTGCTACCGTGGACAGGTTGCCCTGGCACCTTTGATATTGCTGGCCCA
GCATGACACGGGTGCTGGCACAAGACAGGAAAATTAAGGGATACAAGAACAATTTGCACCACAT
AAACCACTGAGATAAACTGAGCACCTCAAGGCCTTTCCAGTTATTCAAGAAAAAACAAGGGTTA
ATTAGATACATACCATTAAAAATTTATCAGTTTTGAAATATACCATCAGTATTCGCGTATTTGG
AACCATGTCATTACAATTTTACACATATTCAAGATATGCCACTACCTACCATTTACGAAAAAAT
TTGGACCAAATTACCCTTCTTTGCTTCTTTTTCTCCCCTCTCCTTTCTTCCACAGCTCAGAGAA
CAGGTGGCGGCGGAGCGAGCGGCAGCAGCGGCAGCGTCGGAGCGAGCGGCGAGCGGCAGCGGCG
GAGCGGCGCGGCAGCAGCACCGCCAGCGTCGGAGCGAGCGGCGACGGCAGCGCGGACGGCGCGC
AGCAAC
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021