Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d013083_circ_g.5 |
ID in PlantcircBase | zma_circ_001876 |
Alias | circ863 |
Organism | Zea mays |
Position | chr5: 4470723-4472379 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d013083 |
Parent gene annotation |
5'-3' exoribonuclease 4 |
Parent gene strand | - |
Alternative splicing | Zm00001d013083_circ_g.1 Zm00001d013083_circ_g.2 Zm00001d013083_circ_g.3 Zm00001d013083_circ_g.4 |
Support reads | 7 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d013083_T014:2 Zm00001d013083_T001:1 Zm00001d013083_T011:2 Zm00001d013083_T019:2 Zm00001d013083_T017:2 Zm00001d013083_T002:2 Zm00001d013083_T008:3 Zm00001d013083_T021:1 Zm00001d013083_T023:1 Zm00001d013083_T025:1 Zm00001d013083_T006:2 Zm00001d013083_T003:3 Zm00001d013083_T007:2 Zm00001d013083_T009:2 Zm00001d013083_T004:2 Zm00001d013083_T010:2 Zm00001d013083_T015:3 Zm00001d013083_T020:1 Zm00001d013083_T022:1 Zm00001d013083_T024:1 Zm00001d013083_T005:2 |
Conservation Information | |
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Conserved circRNAs | osa_circ_022259 |
PMCS | 0.049856417 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |