Plant Circular RNA Database

Detail information of Zm00001d013984_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d013984_circ_g.3
					
						ID in PlantcircBase
						zma_circ_008430
					
						Alias
						zma_circ_0002053
					
						Organism
						
							Zea mays						
					
						Position
						
							chr5: 27318023-27322828  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d013984						
					
						Parent gene annotation
						
							Protein EXECUTER 1 chloroplastic
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d013984_circ_g.1 Zm00001d013984_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d013984_T021:5
Zm00001d013984_T015:5
Zm00001d013984_T019:5
Zm00001d013984_T024:5
Zm00001d013984_T012:5
Zm00001d013984_T023:5
Zm00001d013984_T006:5
Zm00001d013984_T022:5
Zm00001d013984_T007:5
Zm00001d013984_T011:5
Zm00001d013984_T008:5
Zm00001d013984_T016:5
Zm00001d013984_T013:5
Zm00001d013984_T009:5
Zm00001d013984_T020:5
Zm00001d013984_T018:2
Zm00001d013984_T014:5
Zm00001d013984_T001:5

General Information
CircRNA Name	Zm00001d013984_circ_g.3
ID in PlantcircBase	zma_circ_008430
Alias	zma_circ_0002053
Organism	Zea mays
Position	chr5: 27318023-27322828 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	find_circ
Parent gene	Zm00001d013984
Parent gene annotation	Protein EXECUTER 1 chloroplastic
Parent gene strand	-
Alternative splicing	Zm00001d013984_circ_g.1 Zm00001d013984_circ_g.2
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d013984_T021:5 Zm00001d013984_T015:5 Zm00001d013984_T019:5 Zm00001d013984_T024:5 Zm00001d013984_T012:5 Zm00001d013984_T023:5 Zm00001d013984_T006:5 Zm00001d013984_T022:5 Zm00001d013984_T007:5 Zm00001d013984_T011:5 Zm00001d013984_T008:5 Zm00001d013984_T016:5 Zm00001d013984_T013:5 Zm00001d013984_T009:5 Zm00001d013984_T020:5 Zm00001d013984_T018:2 Zm00001d013984_T014:5 Zm00001d013984_T001:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTCTACCCACAGTGTCATTTTTCACTATAGTAGCAATAGCTAGCCTCAGCTTATGAGCACTTCT
GTAGTCTTCTCTATAAACAGACGCCTGGAGTTGCAAcgaaagttttttgttgctgccgctcaac
tttacacgatcaagctcaacaaaaccatcataatcctgctgatcggtatgcaaacgaactgttt
tctttgaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CGAAAGTTTTTTGTTGCTGCCGCTCAACTTTACACGATCAAGCTCAACAAAACCATCATAATCC
TGCTGATCGGTATGCAAACGAACTGTTTTCTTTGAAGTCTGCTGGGCCTTTCCAGCATCTAGTT
TTTTACTATATTCTTCAGTATAGAAGGAAAACGAGAAGCGGTCTCTTTTTTCTAATCTAGCTGG
CATTCGTTCAAAAGCTTCAGCAGATGGATGAGAAGCATAGTCATCGTTATTCTCAATGACAAAA
TCAATTGAAACCAAGGGTTCAATATCACTTTCGTCACCAGATTCATCACCGTTCTCTTCTGCAG
AAACTGTTTCTGCTACTCCACTGTTATCTTCATCACCAGCATCTTCTGAAGATTCATTTTCAAC
TTCAGGATCATCATTTTCCTCTGAAATCTGATCAAAAATATTGATTATGTAGTCTTTGTCAACA
TTCTGCATGGGTACCACTTTCAAGATTTTAATCCTGGGAACTGCAGTTGGATCGCTTGACAAGT
CTTTCGAACCAGGGCCAGCATCAATGTTGCTATCATCACTATCTTTATCATCCATGTTTACACT
TCCATCGAATTCTTCATGCTTAGACCCTACTGAACTGCTAGATATATTTATACTGTCCATGCCA
AGTTTCTCCCTTAACATGTTTGGCACTTGGTCAGAATCACTATCATCTGGTTTCAGATGCACTG
CCTGAAAACATCCCAATTTTTAAAATGGACAAAACTATAAGACATTACTAACAAGATAAGAGTT
CATTTTTAATATAGTAACTGTTATTTGACCTTACTCATAGCTACTGAAATCTTGCAGTTAACAA
TATCAGCACTTGAAATCGGAAGCTGCTCAAAACTGATACAGGAAATTTATTCTCATGGTGCATG
CCAAATACATTTTCCCAATATAATGCAAAGTTGCAAACGCTCAAGTTCAATGTGTGTGGATTTA
TGTACAGGGATATGAAACGTGAAGTGAAACAAGGCTTTTTTATGTTCATACTCAAGTCTGACAA
ACATGTGCAAGTACGGGCCAGCAACATATGGTCCAGCCAGAGAGTTAGGTGTTGTTTGGTTCAC
GAAATGTAACGTAAATGGTAACGGTAATAATTCACACCTGATTACCAGCGGTAACATGGTTTTT
AAAGCGGTAAGGCGGTCCAAGGCGTTGGAGCACCGCCTAGGCGAGGTAGGCGGGCAAGGCGCCT
AGGCTTTAGACCACCGCCCGGACGCCTAGGCGACACCTTAAGAACAGAGGCGGTAACAAGTTTG
AATAAGATGGTATTAATTTCTAGTGGTATCTGATTACAGTTGGACTTAAACAAACATGGTTTAA
CGTTATCGATTACCGTTCACGTTACAAATAGGTGAACCAAACAGCACCTTAATGGTTTTTTAAA
TAAAAAATGAGTATGCAAGGCTGTCCAATATGGCGCTTGGCATTATCATATTCTATACTAATAA
TAATGTCAAAAATCTGAACCATGGGAATGGGAAGAATACGCTTGTCATTATCATATCATATACT
GTTAATGTCAAAAATCTCAACCATGGGAGAAGACATGTCCCTAGCTTTTCTTCCAAACCCTGTT
TGACCATGAAACACAATGAAACCAGTTCTCACTTCTCAGAAAGGTACCCACATCCACATGACAT
GTGAGCCAGGTACAAAGCCAGGAGGATGTCTACACAAATGGAGGCTCCATCAACTGAATTATCA
CTCAGTCCTCAACAGCGAAAAGAAATAAAGGATGACATCCAGAATTTCTAGAGCACATGTCAAA
ACTCAGTATTCTGTTTACGAACCTAGTAAGTGGTAAGATTACATGAAATAGAAGATGATTTTTA
TGTTTCCCAACCCAAAATTTCATTGCCAAAATTATTTTAATACTTGCACATTGATTTTACTTTT
ATTAAGTGTAAAGCATTGTACCTGCAGGTTGTATCCACCATTTGCCTCTGCAAAGTATATTTCA
AATATAGGGAGACCAGAGCTGTCAGAAGTCAGCTGTCTGAAAATGAGGAGAATTAAAAAGTCAT
TTAGCATGCAAACAAATATTTCTTTTTTTCTCGAATACGCAGGAGAGTTGTGTATAATTACATG
AATAAGAAATATAGAAGGGTATAGACCCTATTACATAGAGGACACACACAATTGTCACCTGATA
CAAACAAACACTACCACGACCAACACACGGGAAAACACTAAGTGCCTAACCCACCGACCTGAAG
ATAGGAGAGAGCTTTAGCATCAGCCATAGACCAGTACAGAAGCTCCTCCTTAGCCATTCTAACA
GCAGAAATAACACTAGGAAGACACTTATCAAACACACTTATTTATATGCAAACAAATATTTCAT
ACAATAAAGTAAACACATTTTGCACCAGTAAAATGAAATCAGCTAAAAGGTACTATAACATTAA
CAAGCATATGGATCACCGGCGCATATATTTAAGGAAGTTTAAAACTGTAGTGCTGATTATATTA
ACTTATGAAACATGTGTGTTACTGTTCAAGCAGTCTGCTGCACCATATCACCAACTAGGAATGA
TAAAAGGGAAGTTTCTTCTTGCAGTTCTTCATAGAACATTTTAATGATTTATGACTGGCATGCT
GAGGCATGCTTTGGGATATTTTGAAAACAAGTTGTTCACTTGTATAAATTCGCAATCCATTTTG
CCCACACGTTTCTTCACAGATAAGATCCAGTGACTAATTCAACTATCAAGTAGGCTAACTCAAC
CACAAACAGACACACTTCTCTCCTGTTGTACGCATTAATTTCTCTACGAGTGACCTCCTGATGC
TCAAACCAGTACTTATGTGCACCCTGTAACCAAAATAGCATTGCCAAATGCCAAGAGCTCCTTA
AGTGGTCTAGGACCTAGAGCATACCGCAGTAACCCCATTATCTCATGCATTTTTACCATCCACA
GCGAAATATTAATATTGAAATGTATTCGAGAATTCCATAAAAGGGCAGACTTGGAGCAGCGGTG
AGAGCTGTTTCACTGAGTCACCAGGTCACGGGTTCAAAGCATCCTCTCCGCATTTGCGAGGGCA
AGGCTTGCCTCAGTTTATCCCTTTCCTAGACCCCACTCAGGGCTTGTTCGGTTAGGAGTGGATT
GGAGGGAATTTAATCCCACTCAATGCCCTCCGATCCGTACGCAAACGAACAAGGCCTCATGTGG
GAGCATCCAACACTAGGTCTGCCCTTTTTATTCGAGCATTCCATCCTTTAAAACGAAGACAGAA
AATGTGAAGAGCAAGTCCACTCGCAGAATGATCAATTAAACTATAAATGATCAACAATAATGTT
TACTCCTTAAGTGCTTTAGGACCTAGAGCATACCATAGTAGAGAACCCCATAATCCTAGGCATT
TTTTCCATCCACAACAAAATATTAATAATGAAATGTATTTGAGATCGAGCATTCCATCTTTAAA
ACAAAGACAGGCAAACGAGAAGAGCAAGTCCACTCACAAAATGATCAATTAAACTATAAACAAT
CAACAGTAATGTTATTATTCACACAATAATATTCAACAAAATTAATACCTTGTATCATAACTTC
TTGCCACATATCGACCATGTTCAGCACTTATACGAATTATAAGACCATATGGATCGGACAAATT
TCCGGAAATTCCAGACCACCACCCCAGCTGCATGTGCTCTAATGGATCAGACAATGGAATACTT
TGTTCGGATGGAAAGAAATATGATGTAATAGGCAATTATGAATCACAAAGCATAATCAAAGGTT
TATTGTTTGAGAAAGAATAGTAAAAATCTATTAACTTGGATGCAAAGAAGTCAAAGAAACTTAG
ATAGCAAGGGACAAACAATATAGAAGAACTCCACGGTACTAACCAGTCCTGTGCCAGCATGATC
TCTGATATATGCTGCATCCTTGTAGCGTTCCTCATCTATGGCCATCTGCAAAACCCAAAATAGC
AGACAACTATCTTATAAATAACAATTTTAGCCCCTCAACTTGATCATAGACCAAATCAGCTCCT
CTACACGAAAACACTTGATACTAGTTCTTCTATAAATGTATTATATGGCTAGCAGTCCTGTTAC
CAAGGGTGTTGACATATCACATATGACATGGTATAATGATACTGGTTACAACGGAGTATGTGCT
ACAGCAGCTAAGAGAACATATTAGTGTAAGGACAACATCCCCATACATTCAGTTATTTCAGATA
GCTGCAAACTTAGTTGATGTTTATTATTACTTCTTTCAGTCAACTAAGTGGTGTTTTTATACTT
ATAAGACCTCCAGAACACCACTTTGACCATAATTTACTAATATCTAGTGGTGTGCTTTTTATAA
GTACAACATCCAATCTAAATATTCAGAAATATGGATACCAGATATTAAAACATCTAGAGGCAAG
CATCCTAAAATGTCGTATTCAGAGATATGGATACCAGATTAAATCATCTGGAGACAGGCATCCT
AAAATGTCATCTAGTTTTACTAGAGGGAGTACTCTACAGCTAAATTATGAACCATACAAGACAT
TCATCCTTCTTGTAGAGTAGGAGCAATATTACACTGTAAGTAGTGCGTAATGTAGAAGAGGGTA
ATTCAAATATGAAAGAAAATAAAAAAAAGGTAAGAAATATTATTTACCACTAACTAAATAAGAC
AAATAAATATTTCTTACATTTAAGTCAGAGACAGCTCTACCCACAGTGTCATTTTTCACTATAG
TAGCAATAGCTAGCCTCAGCTTATGAGCACTTCTGTAGTCTTCTCTATAAACAGACGCCTGGAG
TTGCAA
						
					

			
		

Sequences
Splice junction sequence	CTCTACCCACAGTGTCATTTTTCACTATAGTAGCAATAGCTAGCCTCAGCTTATGAGCACTTCT GTAGTCTTCTCTATAAACAGACGCCTGGAGTTGCAAcgaaagttttttgttgctgccgctcaac tttacacgatcaagctcaacaaaaccatcataatcctgctgatcggtatgcaaacgaactgttt tctttgaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CGAAAGTTTTTTGTTGCTGCCGCTCAACTTTACACGATCAAGCTCAACAAAACCATCATAATCC TGCTGATCGGTATGCAAACGAACTGTTTTCTTTGAAGTCTGCTGGGCCTTTCCAGCATCTAGTT TTTTACTATATTCTTCAGTATAGAAGGAAAACGAGAAGCGGTCTCTTTTTTCTAATCTAGCTGG CATTCGTTCAAAAGCTTCAGCAGATGGATGAGAAGCATAGTCATCGTTATTCTCAATGACAAAA TCAATTGAAACCAAGGGTTCAATATCACTTTCGTCACCAGATTCATCACCGTTCTCTTCTGCAG AAACTGTTTCTGCTACTCCACTGTTATCTTCATCACCAGCATCTTCTGAAGATTCATTTTCAAC TTCAGGATCATCATTTTCCTCTGAAATCTGATCAAAAATATTGATTATGTAGTCTTTGTCAACA TTCTGCATGGGTACCACTTTCAAGATTTTAATCCTGGGAACTGCAGTTGGATCGCTTGACAAGT CTTTCGAACCAGGGCCAGCATCAATGTTGCTATCATCACTATCTTTATCATCCATGTTTACACT TCCATCGAATTCTTCATGCTTAGACCCTACTGAACTGCTAGATATATTTATACTGTCCATGCCA AGTTTCTCCCTTAACATGTTTGGCACTTGGTCAGAATCACTATCATCTGGTTTCAGATGCACTG CCTGAAAACATCCCAATTTTTAAAATGGACAAAACTATAAGACATTACTAACAAGATAAGAGTT CATTTTTAATATAGTAACTGTTATTTGACCTTACTCATAGCTACTGAAATCTTGCAGTTAACAA TATCAGCACTTGAAATCGGAAGCTGCTCAAAACTGATACAGGAAATTTATTCTCATGGTGCATG CCAAATACATTTTCCCAATATAATGCAAAGTTGCAAACGCTCAAGTTCAATGTGTGTGGATTTA TGTACAGGGATATGAAACGTGAAGTGAAACAAGGCTTTTTTATGTTCATACTCAAGTCTGACAA ACATGTGCAAGTACGGGCCAGCAACATATGGTCCAGCCAGAGAGTTAGGTGTTGTTTGGTTCAC GAAATGTAACGTAAATGGTAACGGTAATAATTCACACCTGATTACCAGCGGTAACATGGTTTTT AAAGCGGTAAGGCGGTCCAAGGCGTTGGAGCACCGCCTAGGCGAGGTAGGCGGGCAAGGCGCCT AGGCTTTAGACCACCGCCCGGACGCCTAGGCGACACCTTAAGAACAGAGGCGGTAACAAGTTTG AATAAGATGGTATTAATTTCTAGTGGTATCTGATTACAGTTGGACTTAAACAAACATGGTTTAA CGTTATCGATTACCGTTCACGTTACAAATAGGTGAACCAAACAGCACCTTAATGGTTTTTTAAA TAAAAAATGAGTATGCAAGGCTGTCCAATATGGCGCTTGGCATTATCATATTCTATACTAATAA TAATGTCAAAAATCTGAACCATGGGAATGGGAAGAATACGCTTGTCATTATCATATCATATACT GTTAATGTCAAAAATCTCAACCATGGGAGAAGACATGTCCCTAGCTTTTCTTCCAAACCCTGTT TGACCATGAAACACAATGAAACCAGTTCTCACTTCTCAGAAAGGTACCCACATCCACATGACAT GTGAGCCAGGTACAAAGCCAGGAGGATGTCTACACAAATGGAGGCTCCATCAACTGAATTATCA CTCAGTCCTCAACAGCGAAAAGAAATAAAGGATGACATCCAGAATTTCTAGAGCACATGTCAAA ACTCAGTATTCTGTTTACGAACCTAGTAAGTGGTAAGATTACATGAAATAGAAGATGATTTTTA TGTTTCCCAACCCAAAATTTCATTGCCAAAATTATTTTAATACTTGCACATTGATTTTACTTTT ATTAAGTGTAAAGCATTGTACCTGCAGGTTGTATCCACCATTTGCCTCTGCAAAGTATATTTCA AATATAGGGAGACCAGAGCTGTCAGAAGTCAGCTGTCTGAAAATGAGGAGAATTAAAAAGTCAT TTAGCATGCAAACAAATATTTCTTTTTTTCTCGAATACGCAGGAGAGTTGTGTATAATTACATG AATAAGAAATATAGAAGGGTATAGACCCTATTACATAGAGGACACACACAATTGTCACCTGATA CAAACAAACACTACCACGACCAACACACGGGAAAACACTAAGTGCCTAACCCACCGACCTGAAG ATAGGAGAGAGCTTTAGCATCAGCCATAGACCAGTACAGAAGCTCCTCCTTAGCCATTCTAACA GCAGAAATAACACTAGGAAGACACTTATCAAACACACTTATTTATATGCAAACAAATATTTCAT ACAATAAAGTAAACACATTTTGCACCAGTAAAATGAAATCAGCTAAAAGGTACTATAACATTAA CAAGCATATGGATCACCGGCGCATATATTTAAGGAAGTTTAAAACTGTAGTGCTGATTATATTA ACTTATGAAACATGTGTGTTACTGTTCAAGCAGTCTGCTGCACCATATCACCAACTAGGAATGA TAAAAGGGAAGTTTCTTCTTGCAGTTCTTCATAGAACATTTTAATGATTTATGACTGGCATGCT GAGGCATGCTTTGGGATATTTTGAAAACAAGTTGTTCACTTGTATAAATTCGCAATCCATTTTG CCCACACGTTTCTTCACAGATAAGATCCAGTGACTAATTCAACTATCAAGTAGGCTAACTCAAC CACAAACAGACACACTTCTCTCCTGTTGTACGCATTAATTTCTCTACGAGTGACCTCCTGATGC TCAAACCAGTACTTATGTGCACCCTGTAACCAAAATAGCATTGCCAAATGCCAAGAGCTCCTTA AGTGGTCTAGGACCTAGAGCATACCGCAGTAACCCCATTATCTCATGCATTTTTACCATCCACA GCGAAATATTAATATTGAAATGTATTCGAGAATTCCATAAAAGGGCAGACTTGGAGCAGCGGTG AGAGCTGTTTCACTGAGTCACCAGGTCACGGGTTCAAAGCATCCTCTCCGCATTTGCGAGGGCA AGGCTTGCCTCAGTTTATCCCTTTCCTAGACCCCACTCAGGGCTTGTTCGGTTAGGAGTGGATT GGAGGGAATTTAATCCCACTCAATGCCCTCCGATCCGTACGCAAACGAACAAGGCCTCATGTGG GAGCATCCAACACTAGGTCTGCCCTTTTTATTCGAGCATTCCATCCTTTAAAACGAAGACAGAA AATGTGAAGAGCAAGTCCACTCGCAGAATGATCAATTAAACTATAAATGATCAACAATAATGTT TACTCCTTAAGTGCTTTAGGACCTAGAGCATACCATAGTAGAGAACCCCATAATCCTAGGCATT TTTTCCATCCACAACAAAATATTAATAATGAAATGTATTTGAGATCGAGCATTCCATCTTTAAA ACAAAGACAGGCAAACGAGAAGAGCAAGTCCACTCACAAAATGATCAATTAAACTATAAACAAT CAACAGTAATGTTATTATTCACACAATAATATTCAACAAAATTAATACCTTGTATCATAACTTC TTGCCACATATCGACCATGTTCAGCACTTATACGAATTATAAGACCATATGGATCGGACAAATT TCCGGAAATTCCAGACCACCACCCCAGCTGCATGTGCTCTAATGGATCAGACAATGGAATACTT TGTTCGGATGGAAAGAAATATGATGTAATAGGCAATTATGAATCACAAAGCATAATCAAAGGTT TATTGTTTGAGAAAGAATAGTAAAAATCTATTAACTTGGATGCAAAGAAGTCAAAGAAACTTAG ATAGCAAGGGACAAACAATATAGAAGAACTCCACGGTACTAACCAGTCCTGTGCCAGCATGATC TCTGATATATGCTGCATCCTTGTAGCGTTCCTCATCTATGGCCATCTGCAAAACCCAAAATAGC AGACAACTATCTTATAAATAACAATTTTAGCCCCTCAACTTGATCATAGACCAAATCAGCTCCT CTACACGAAAACACTTGATACTAGTTCTTCTATAAATGTATTATATGGCTAGCAGTCCTGTTAC CAAGGGTGTTGACATATCACATATGACATGGTATAATGATACTGGTTACAACGGAGTATGTGCT ACAGCAGCTAAGAGAACATATTAGTGTAAGGACAACATCCCCATACATTCAGTTATTTCAGATA GCTGCAAACTTAGTTGATGTTTATTATTACTTCTTTCAGTCAACTAAGTGGTGTTTTTATACTT ATAAGACCTCCAGAACACCACTTTGACCATAATTTACTAATATCTAGTGGTGTGCTTTTTATAA GTACAACATCCAATCTAAATATTCAGAAATATGGATACCAGATATTAAAACATCTAGAGGCAAG CATCCTAAAATGTCGTATTCAGAGATATGGATACCAGATTAAATCATCTGGAGACAGGCATCCT AAAATGTCATCTAGTTTTACTAGAGGGAGTACTCTACAGCTAAATTATGAACCATACAAGACAT TCATCCTTCTTGTAGAGTAGGAGCAATATTACACTGTAAGTAGTGCGTAATGTAGAAGAGGGTA ATTCAAATATGAAAGAAAATAAAAAAAAGGTAAGAAATATTATTTACCACTAACTAAATAAGAC AAATAAATATTTCTTACATTTAAGTCAGAGACAGCTCTACCCACAGTGTCATTTTTCACTATAG TAGCAATAGCTAGCCTCAGCTTATGAGCACTTCTGTAGTCTTCTCTATAAACAGACGCCTGGAG TTGCAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.03723617

Conservation Information
Conserved circRNAs	NA
PMCS	0.03723617

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							27322782-27318118(+)
27321973-27318025(-)
						
					

						Potential amino acid sequence
						
							MSTSVVFSINRRLELQRKFFVAAAQLYTIKLNKTIIILLIGMQTNCFL*(+)
MAIDEERYKDAAYIRDHAGTGLLGWWSGISGNLSDPYGLIIRISAEHGRYVARSYDTRQLTSDS
SGLPIFEIYFAEANGGYNLQAVHLKPDDSDSDQVPNMLREKLGMDSINISSSSVGSKHEEFDGS
VNMDDKDSDDSNIDAGPGSKDLSSDPTAVPRIKILKVVPMQNVDKDYIINIFDQISEENDDPEV
ENESSEDAGDEDNSGVAETVSAEENGDESGDESDIEPLVSIDFVIENNDDYASHPSAEAFERMP
ARLEKRDRFSFSFYTEEYSKKLDAGKAQQTSKKTVRLHTDQQDYDGFVELDRVKLSGSNKKLSL
QLQASVYREDYRSAHKLRLAIATIVKNDTVGRAVSDLNMAIDEERYKDAAYIRDHAGTGLLGWW
SGISGNLSDPYGLIIRISAEHGRYVARSYDTRQLTSDSSGLPIFEIYFAEANGGYNLQAVHLKP
DDSDSDQVPNMLREKLGMDSINISSSSVGSKHEEFDGSVNMDDKDSDDSNIDAGPGSKDLSSDP
TAVPRIKILKVVPMQNVDKDYIINIFDQISEENDDPEVENESSEDAGDEDNSGVAETVSAEENG
DESGDESDIEPLVSIDFVIENNDDYASHPSAEAFERMPARLEKRDRFSFSFYTEEYSKKLDAGK
AQQTSKKTVRLHTDQQDYDGFVELDRVKLSGSNKKLSLQLQASVYREDYRSAHKLRLAIATIVK
NDTVGRAVSDLNMAIDEERYKDAAYIRDHAGTGLLGWWSGISGNLSDPYGLIIRISAEHGRYVA
RSYDTRQLTSDSSGLPIFEIYFAEANGGYNLQAVHLKPDDSDSDQVPNMLREKLGMDSINISSS
SVGSKHEEFDGSVNMDDKDSDDSNIDAGPGSKDLSSDPTAVPRIKILKVVPMQNVDKDYIINIF
DQISEENDDPEVENESSEDAGDEDNSGVAETVSAEENGDESGDESDIEPLVSIDFVIENNDDYA
SHPSAEAFERMPARLEKRDRFSFSFYTEEYSKKLDAGKAQQTSKKTVRLHTDQQDYDGFVELDR
VKLSGSNKKLSLQLQASVYREDYRSAHKLRLAIATIVKNDTVGRAVSDLNMAIDEERYKDAAYI
RDHAGTGLLGWWSGISGNLSDPYGLIIRISAEHGRYVARSYDTRQLTSDSSGLPIFEIYFAEAN
GGYNLQAVHLKPDDSDSDQVPNMLREKLGMDSINISSSSVGSKHEEFDGSVNMDDKDSDDSNID
AGPGSKDLSSDPTAVPRIKILKVVPMQNVDKDYIINIFDQISEENDDPEVENESSEDAGDEDNS
GVAETVSAEENGDESGDESDIEPLVSIDFVIENNDDYASHPSAEAFERMPARLEKRDRFSFSFY
TEEYSKKLDAGKAQQTSKKTVRLHTDQQDYDGFVELDRVKLSGSNKKLS(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	27322782-27318118(+) 27321973-27318025(-)
Potential amino acid sequence	MSTSVVFSINRRLELQRKFFVAAAQLYTIKLNKTIIILLIGMQTNCFL*(+) MAIDEERYKDAAYIRDHAGTGLLGWWSGISGNLSDPYGLIIRISAEHGRYVARSYDTRQLTSDS SGLPIFEIYFAEANGGYNLQAVHLKPDDSDSDQVPNMLREKLGMDSINISSSSVGSKHEEFDGS VNMDDKDSDDSNIDAGPGSKDLSSDPTAVPRIKILKVVPMQNVDKDYIINIFDQISEENDDPEV ENESSEDAGDEDNSGVAETVSAEENGDESGDESDIEPLVSIDFVIENNDDYASHPSAEAFERMP ARLEKRDRFSFSFYTEEYSKKLDAGKAQQTSKKTVRLHTDQQDYDGFVELDRVKLSGSNKKLSL QLQASVYREDYRSAHKLRLAIATIVKNDTVGRAVSDLNMAIDEERYKDAAYIRDHAGTGLLGWW SGISGNLSDPYGLIIRISAEHGRYVARSYDTRQLTSDSSGLPIFEIYFAEANGGYNLQAVHLKP DDSDSDQVPNMLREKLGMDSINISSSSVGSKHEEFDGSVNMDDKDSDDSNIDAGPGSKDLSSDP TAVPRIKILKVVPMQNVDKDYIINIFDQISEENDDPEVENESSEDAGDEDNSGVAETVSAEENG DESGDESDIEPLVSIDFVIENNDDYASHPSAEAFERMPARLEKRDRFSFSFYTEEYSKKLDAGK AQQTSKKTVRLHTDQQDYDGFVELDRVKLSGSNKKLSLQLQASVYREDYRSAHKLRLAIATIVK NDTVGRAVSDLNMAIDEERYKDAAYIRDHAGTGLLGWWSGISGNLSDPYGLIIRISAEHGRYVA RSYDTRQLTSDSSGLPIFEIYFAEANGGYNLQAVHLKPDDSDSDQVPNMLREKLGMDSINISSS SVGSKHEEFDGSVNMDDKDSDDSNIDAGPGSKDLSSDPTAVPRIKILKVVPMQNVDKDYIINIF DQISEENDDPEVENESSEDAGDEDNSGVAETVSAEENGDESGDESDIEPLVSIDFVIENNDDYA SHPSAEAFERMPARLEKRDRFSFSFYTEEYSKKLDAGKAQQTSKKTVRLHTDQQDYDGFVELDR VKLSGSNKKLSLQLQASVYREDYRSAHKLRLAIATIVKNDTVGRAVSDLNMAIDEERYKDAAYI RDHAGTGLLGWWSGISGNLSDPYGLIIRISAEHGRYVARSYDTRQLTSDSSGLPIFEIYFAEAN GGYNLQAVHLKPDDSDSDQVPNMLREKLGMDSINISSSSVGSKHEEFDGSVNMDDKDSDDSNID AGPGSKDLSSDPTAVPRIKILKVVPMQNVDKDYIINIFDQISEENDDPEVENESSEDAGDEDNS GVAETVSAEENGDESGDESDIEPLVSIDFVIENNDDYASHPSAEAFERMPARLEKRDRFSFSFY TEEYSKKLDAGKAQQTSKKTVRLHTDQQDYDGFVELDRVKLSGSNKKLS(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d013984_circ_g.3

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