Plant Circular RNA Database

Detail information of BGIOSGA018078_circ_g.5

			
						 General Information
					
						CircRNA Name
						BGIOSGA018078_circ_g.5
					
						ID in PlantcircBase
						osi_circ_006236
					
						Alias
						5:20969352|20972987
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr5: 20969352-20972987  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA018078						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							BGIOSGA018078_circ_g.1 BGIOSGA018078_circ_g.2 BGIOSGA018078_circ_g.3 BGIOSGA018078_circ_g.4 BGIOSGA018078_circ_g.6 BGIOSGA018078_circ_g.7 BGIOSGA018078_circ_g.8 BGIOSGA018078_circ_g.9 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA018078-TA:6

General Information
CircRNA Name	BGIOSGA018078_circ_g.5
ID in PlantcircBase	osi_circ_006236
Alias	5:20969352\|20972987
Organism	Oryza sativa ssp. indica
Position	chr5: 20969352-20972987 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA018078
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	BGIOSGA018078_circ_g.1 BGIOSGA018078_circ_g.2 BGIOSGA018078_circ_g.3 BGIOSGA018078_circ_g.4 BGIOSGA018078_circ_g.6 BGIOSGA018078_circ_g.7 BGIOSGA018078_circ_g.8 BGIOSGA018078_circ_g.9
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA018078-TA:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CGTACGCGAAGCGGTCGCCGCTCTTGGCCGCCAGTCCCGCCGCCACCTCGTCGTTCAGCCCCAG
GTTCAGCACCGTGTCCATCATCCCCGGCATCGACACcagaataacatctttcccttgggcatgc
catgcttcagcatcctcggcagtgaatacaatttggcccacagcagccccaggtgatgcaggta
agcccgtg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CAGAATAACATCTTTCCCTTGGGCATGCCATGCTTCAGCATCCTCGGCAGTGAATACAATTTGG
CCCACAGCAGCCCCAGGTGATGCAGGTAAGCCCGTGGCAATAACTTTGTCTTTATACCCTGATG
GGTTCTCAAACTGGTTTTCATAACAAAAGATTAAAAGTGAGATATCAATAACTGCCATTAATTT
AGTTGTGAACTGAAACTCAAGTACGCAATGTCCAAGACCTGTGCAGAAACTAGCAGGCAACAAA
ATTTTAAAACAACAGTTACCAACATCAATACTTGTGTGATTATGTTTGATATTTGTTAGTTATG
ATAATAGTATTATACTTTACTACACAAGACGTAATGAGATAATCTCTGTTGTTTGCTAAAACTC
ATTCCAAATAATTCAAAATGCTCAGAGTTCAAGTAACAAACACTCTACCTATTTTGTGGAAAAA
TATAACATAAAGATTTTGATGTTCAGAATTAAAGCAGACATGCGTATCAAATTTCACTAATAGA
TCGCAAACACACATTTAATCTTTGATTATTCTAGCTTACTATTAAGTATTAACTGATTTATTCT
AAGCACGCAATCGATGTGGTAACTTCTATGACATCAATACACCAACCCAACAAAATTGTTCTAA
AAGAGCAACACGGCATTTTGGGATAACAGAGGTATTATGAAATTGTACGTGTCCATTTATGTGG
TGCATGAGTTTATAGACCATTAGAGCCTCTTAGTTATACAATACCTGAGGATGAAGAAGCTGAT
CCAGGTGACCTGGTTCTACCATCTTAAGTGCTGTGCGGCGCTCAACAAGGCCCTCGTTAACCAT
GTCTACAGCAATCTTTACAGCACCTTTTCCTGTGCGCTTTCCTGTTCTGCACTGAAGCATCCAA
AGCCTATTTTCCTGAACAGTAAATTCAATATCCTGCATTATACATGAAAATTAAGTTAGTCCCC
CAAAAAAAAATAATGGAGGCACATTACCTAGTTGCTAAACCAAGAGCATGATCAAGATCGTTTC
AAATCACTTATTTCTGTGTGCAAGCTATTGGAGGTAATGAGATATCACCAAGACAATGCTCGAG
TATATGATCAGACGATCGTGCTTCCTTTTAAGTTTCAGTTTGAGGGAAAAGTAGGACACTTATG
CCTCTAGAACTGCCTTAATCCCATTATCTAATAAGGTATTGATGCATAAAGCAAATTAGAATAT
TGTACCATCATTTCTTTATAGTGACTCTCCAAAATTTTGCAGTTCTCAACGAGCTCTTCATAAG
GCTCCGGCATGTGGTCCCTCATAGCATCAAGATCCTCTGGAGTTCTGATTCCAGCAACCACATC
TTCACCCTGCAGAAGAAATAATATTGCATTATAAGAAATCGTTCGGGTATATATGAATTATCGC
CGCTTGCATAACCCAATACGATCAGCAGGAAACATATTGCTCATACATTGATTCATACACACAA
ACCACAGGTGTGCAACAGTTAGCAGCTAGATGCAAATAGGAGCAACAGGGTGTGAGCCATACCT
GAGCATTCACAAGGAATTCGCCGTAAAGCTTCTTCTCTCCAGTGCTTGGGTTCCTAGTGAAGAG
CACACCCGTGCCAGAGGTGTTCCCCATGTTTCCAAACACCATGGTCTGCACGTTTACAGCAGTG
CCCTTCAGCCCAGTGATCTTGTTTATGCTTCTGTACTTGATTGCTCTTGGGCTATCCCATGAGT
TGAACACGGCCAACACGGCCAGCTGCAGTTGCTTCTTGGGATCTATGGCAAGCAAACAACACAG
TACATTAGCATTCAGACGCCAAAAGAAAAGGCTCAGTTTCATCAAAACACTAATTAATTTCAGA
TATCACGAAGAGTGAAACTTTATGGGCATACCAGAGGGAAATGGCTCTCCCTTAGCTTCAACAT
AGACATCCTTGTACTGTGCCACTAGTTCTTTGAGGTCAGTGGCAGTCAGGTCAGTGTCGTTGTG
CAGCCCCTTGACTGCTTTCATGGCTTCGAGCTTCTCCTCGAACAGTGCATGAGGAATGTCCATG
ACCTGGAAAAGAGAGAGAAAAAAATTCTAAGAACTGATCTCTGTAGCATTCAAGAACCAGGAAG
CATTCATGACCTGTAACCAATTTTTGGGCTGAATAAAGGCAAAATTCCCCTCTATTGAGTAACA
ACTAACACCCATCACAAATTCACGATTCTGCGGCTCATCCTTGCGACATCCTACCGAAACCCTC
TGGCCTTATCTTACCAGCGAATCGCGGCCAAGGCAATCGAAGCTGGTATAGGTCTAGCATCCAT
GATGGGCTCAGGCGCGGTCCGCGGCGGCGGCGGCGGCGCTTGTGATGAGTCGAACCATGGCAGC
GCTTGTGATGAGTCGAACCATGGCTGGGATTGGTAGGAGGAGGGAGGTGGTCGAGGGCTCGGGG
CGCAGTGGAGTTCGAACCACTTCGACTCCAGCGACCGGACCGGTCCGGTCCGGTGCAAGGTGAC
CGACCGACCGGTTGCGCACCCCAAGCAAAGGGCAAAAGTTGTGCAGACCGCCGAGACCGGTGTG
GTGAACGGTGCGCTTGAAAAATATAATAAAACTTACTGTTTTTTACTCTAAATTAAATTTGCTA
AAAAAGAATAAAATTAAGAACATTTTTTCCAAAAAAAATAAGCTTTGATGAATATAGGTGAAAA
AAAAGTAATTGGTTGTATGACTGGACTAGCAACCAACTTGTCTTTGAACTTCTAGGAAGACAGA
TATTTCCATATTGCAGATGTTATCAGGTACTATGTTGGAGGACCCTGTACTGATTAATTTAATT
ATTACATGAAATAGGAGTATATGTGAGCTGAGCTAGTAAGGAGTGTCAAATTGTACTGCTAACC
ACCCATCGCCTTCACCAGTCATCCTTTCCAATAAAATTAAAGAACTATGGTCAAAATACGGCAA
TAGTGCCGTACAGGTCTCCTAAGAAAACATCTTGTATTCTTTGTACGAGGAGATCAAATATTGA
CAGCAAGTTCCATGTTAATCCCTTGCTAGCACATAATCGCATATACGATCGAGAGGGACATACT
ATCTCTTGTTTTTTTTTCCTTTTTTTTCTTGACACAATACTAAAATATTCTCCTTGTAACTTTT
CTAAAGTCAAATACTACTAAAATTATTCCCTATTTTCTAATAGTAAAATAGAGCCACAAAAGAA
CAATAAGCTTTGGGAAGTTGGAGTGACTCTAGTGCGGACAAATTCCCCCCACATAGGATGAGAC
GGAAGAACCGGGCCCCACCCAACGCACAAAAGTATGCGCATCCGCAGCCACCACCGTCGCGTCG
CTGACGCAGCATAAATAACTTACCCACCACGTCGATGCAGCCGTGGCAGTGTTGACGCACACGA
AAGTAGCAGAGAACAAGTAAAATTAAGCTCGTGAGCTCCGACGAGCTAGGCAGCTAGCTGCCGA
GTCAGCGAGCCGGGAGAGTGTGATCTGATGAGGAGTACGTACCACGTTGCCGAACATGTCGAGG
AAACGGCGGTAGGAGTCGTACGCGAAGCGGTCGCCGCTCTTGGCCGCCAGTCCCGCCGCCACCT
CGTCGTTCAGCCCCAGGTTCAGCACCGTGTCCATCATCCCCGGCATCGACAC
						
					

			
		

Sequences
Splice junction sequence	CGTACGCGAAGCGGTCGCCGCTCTTGGCCGCCAGTCCCGCCGCCACCTCGTCGTTCAGCCCCAG GTTCAGCACCGTGTCCATCATCCCCGGCATCGACACcagaataacatctttcccttgggcatgc catgcttcagcatcctcggcagtgaatacaatttggcccacagcagccccaggtgatgcaggta agcccgtg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CAGAATAACATCTTTCCCTTGGGCATGCCATGCTTCAGCATCCTCGGCAGTGAATACAATTTGG CCCACAGCAGCCCCAGGTGATGCAGGTAAGCCCGTGGCAATAACTTTGTCTTTATACCCTGATG GGTTCTCAAACTGGTTTTCATAACAAAAGATTAAAAGTGAGATATCAATAACTGCCATTAATTT AGTTGTGAACTGAAACTCAAGTACGCAATGTCCAAGACCTGTGCAGAAACTAGCAGGCAACAAA ATTTTAAAACAACAGTTACCAACATCAATACTTGTGTGATTATGTTTGATATTTGTTAGTTATG ATAATAGTATTATACTTTACTACACAAGACGTAATGAGATAATCTCTGTTGTTTGCTAAAACTC ATTCCAAATAATTCAAAATGCTCAGAGTTCAAGTAACAAACACTCTACCTATTTTGTGGAAAAA TATAACATAAAGATTTTGATGTTCAGAATTAAAGCAGACATGCGTATCAAATTTCACTAATAGA TCGCAAACACACATTTAATCTTTGATTATTCTAGCTTACTATTAAGTATTAACTGATTTATTCT AAGCACGCAATCGATGTGGTAACTTCTATGACATCAATACACCAACCCAACAAAATTGTTCTAA AAGAGCAACACGGCATTTTGGGATAACAGAGGTATTATGAAATTGTACGTGTCCATTTATGTGG TGCATGAGTTTATAGACCATTAGAGCCTCTTAGTTATACAATACCTGAGGATGAAGAAGCTGAT CCAGGTGACCTGGTTCTACCATCTTAAGTGCTGTGCGGCGCTCAACAAGGCCCTCGTTAACCAT GTCTACAGCAATCTTTACAGCACCTTTTCCTGTGCGCTTTCCTGTTCTGCACTGAAGCATCCAA AGCCTATTTTCCTGAACAGTAAATTCAATATCCTGCATTATACATGAAAATTAAGTTAGTCCCC CAAAAAAAAATAATGGAGGCACATTACCTAGTTGCTAAACCAAGAGCATGATCAAGATCGTTTC AAATCACTTATTTCTGTGTGCAAGCTATTGGAGGTAATGAGATATCACCAAGACAATGCTCGAG TATATGATCAGACGATCGTGCTTCCTTTTAAGTTTCAGTTTGAGGGAAAAGTAGGACACTTATG CCTCTAGAACTGCCTTAATCCCATTATCTAATAAGGTATTGATGCATAAAGCAAATTAGAATAT TGTACCATCATTTCTTTATAGTGACTCTCCAAAATTTTGCAGTTCTCAACGAGCTCTTCATAAG GCTCCGGCATGTGGTCCCTCATAGCATCAAGATCCTCTGGAGTTCTGATTCCAGCAACCACATC TTCACCCTGCAGAAGAAATAATATTGCATTATAAGAAATCGTTCGGGTATATATGAATTATCGC CGCTTGCATAACCCAATACGATCAGCAGGAAACATATTGCTCATACATTGATTCATACACACAA ACCACAGGTGTGCAACAGTTAGCAGCTAGATGCAAATAGGAGCAACAGGGTGTGAGCCATACCT GAGCATTCACAAGGAATTCGCCGTAAAGCTTCTTCTCTCCAGTGCTTGGGTTCCTAGTGAAGAG CACACCCGTGCCAGAGGTGTTCCCCATGTTTCCAAACACCATGGTCTGCACGTTTACAGCAGTG CCCTTCAGCCCAGTGATCTTGTTTATGCTTCTGTACTTGATTGCTCTTGGGCTATCCCATGAGT TGAACACGGCCAACACGGCCAGCTGCAGTTGCTTCTTGGGATCTATGGCAAGCAAACAACACAG TACATTAGCATTCAGACGCCAAAAGAAAAGGCTCAGTTTCATCAAAACACTAATTAATTTCAGA TATCACGAAGAGTGAAACTTTATGGGCATACCAGAGGGAAATGGCTCTCCCTTAGCTTCAACAT AGACATCCTTGTACTGTGCCACTAGTTCTTTGAGGTCAGTGGCAGTCAGGTCAGTGTCGTTGTG CAGCCCCTTGACTGCTTTCATGGCTTCGAGCTTCTCCTCGAACAGTGCATGAGGAATGTCCATG ACCTGGAAAAGAGAGAGAAAAAAATTCTAAGAACTGATCTCTGTAGCATTCAAGAACCAGGAAG CATTCATGACCTGTAACCAATTTTTGGGCTGAATAAAGGCAAAATTCCCCTCTATTGAGTAACA ACTAACACCCATCACAAATTCACGATTCTGCGGCTCATCCTTGCGACATCCTACCGAAACCCTC TGGCCTTATCTTACCAGCGAATCGCGGCCAAGGCAATCGAAGCTGGTATAGGTCTAGCATCCAT GATGGGCTCAGGCGCGGTCCGCGGCGGCGGCGGCGGCGCTTGTGATGAGTCGAACCATGGCAGC GCTTGTGATGAGTCGAACCATGGCTGGGATTGGTAGGAGGAGGGAGGTGGTCGAGGGCTCGGGG CGCAGTGGAGTTCGAACCACTTCGACTCCAGCGACCGGACCGGTCCGGTCCGGTGCAAGGTGAC CGACCGACCGGTTGCGCACCCCAAGCAAAGGGCAAAAGTTGTGCAGACCGCCGAGACCGGTGTG GTGAACGGTGCGCTTGAAAAATATAATAAAACTTACTGTTTTTTACTCTAAATTAAATTTGCTA AAAAAGAATAAAATTAAGAACATTTTTTCCAAAAAAAATAAGCTTTGATGAATATAGGTGAAAA AAAAGTAATTGGTTGTATGACTGGACTAGCAACCAACTTGTCTTTGAACTTCTAGGAAGACAGA TATTTCCATATTGCAGATGTTATCAGGTACTATGTTGGAGGACCCTGTACTGATTAATTTAATT ATTACATGAAATAGGAGTATATGTGAGCTGAGCTAGTAAGGAGTGTCAAATTGTACTGCTAACC ACCCATCGCCTTCACCAGTCATCCTTTCCAATAAAATTAAAGAACTATGGTCAAAATACGGCAA TAGTGCCGTACAGGTCTCCTAAGAAAACATCTTGTATTCTTTGTACGAGGAGATCAAATATTGA CAGCAAGTTCCATGTTAATCCCTTGCTAGCACATAATCGCATATACGATCGAGAGGGACATACT ATCTCTTGTTTTTTTTTCCTTTTTTTTCTTGACACAATACTAAAATATTCTCCTTGTAACTTTT CTAAAGTCAAATACTACTAAAATTATTCCCTATTTTCTAATAGTAAAATAGAGCCACAAAAGAA CAATAAGCTTTGGGAAGTTGGAGTGACTCTAGTGCGGACAAATTCCCCCCACATAGGATGAGAC GGAAGAACCGGGCCCCACCCAACGCACAAAAGTATGCGCATCCGCAGCCACCACCGTCGCGTCG CTGACGCAGCATAAATAACTTACCCACCACGTCGATGCAGCCGTGGCAGTGTTGACGCACACGA AAGTAGCAGAGAACAAGTAAAATTAAGCTCGTGAGCTCCGACGAGCTAGGCAGCTAGCTGCCGA GTCAGCGAGCCGGGAGAGTGTGATCTGATGAGGAGTACGTACCACGTTGCCGAACATGTCGAGG AAACGGCGGTAGGAGTCGTACGCGAAGCGGTCGCCGCTCTTGGCCGCCAGTCCCGCCGCCACCT CGTCGTTCAGCCCCAGGTTCAGCACCGTGTCCATCATCCCCGGCATCGACAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							20972983-20969354(-)
20969384-20971324(-)
20971385-20969432(+)
						
					

						Potential amino acid sequence
						
							MPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRFLDMFGNVVMDIPHALFEEKLEAMKAVK
GLHNDTDLTATDLKELVAQYKDVYVEAKGEPFPSDPKKQLQLAVLAVFNSWDSPRAIKYRSINK
ITGLKGTAVNVQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLVNAQGEDVVAGIRTPEDLD
AMRDHMPEPYEELVENCKILESHYKEMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNE
GLVERRTALKMVEPGHLDQLLHPQFENPSGYKDKVIATGLPASPGAAVGQIVFTAEDAEAWHAQ
GKDVILVSMPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRFLDMFGNVVMDIPHALFEEK
LEAMKAVKGLHNDTDLTATDLKELVAQYKDVYVEAKGEPFPSDPKKQLQLAVLAVFNSWDSPRA
IKYRSINKITGLKGTAVNVQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLVNAQGEDVVAG
IRTPEDLDAMRDHMPEPYEELVENCKILESHYKEMMDIEFTVQENRLWMLQCRTGKRTGKGAVK
IAVDMVNEGLVERRTALKMVEPGHLDQLLHPQFENPSGYKDKVIATGLPASPGAAVGQIVFTAE
DAEAWHAQGKDVILVSMPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRFLDMFGNVVMDI
PHALFEEKLEAMKAVKGLHNDTDLTATDLKELVAQYKDVYVEAKGEPFPSDPKKQLQLAVLAVF
NSWDSPRAIKYRSINKITGLKGTAVNVQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLVNA
QGEDVVAGIRTPEDLDAMRDHMPEPYEELVENCKILESHYKEMMDIEFTVQENRLWMLQCRTGK
RTGKGAVKIAVDMVNEGLVERRTALKMVEPGHLDQLLHPQFENPSGYKDKVIATGLPASPGAAV
GQIVFTAEDAEAWHAQGKDVILVSMPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRFLDM
FGNVVMDIPHALFEEKLEAMKAVKGLHNDTDLTATDLKELVAQYKDVYVEAKGEPFPSDPKKQL
QLAVLAVFNSWDSPRAIKYRSINKITGLKGTAVNVQTMVFGNMGNTSGTGVLFTRNPSTGEKKL
YGEFLVNAQGEDVVAGIRTPEDLDAMRDHMPEPYEELVENCKILESHYKEMMDIEFTVQENRLW
MLQCRTGKRTGKGAVKIAVDMVNEGLVERRTALKMVEPGHLDQLLHPQFENPSGYKDKVIATGL
PASPGAAVGQIVFTAEDAEAWHAQGKDVIL(-)
MACPRERCYSGVDAGDDGHGAEPGAERRGGGGTGGQERRPLRVRLLPPFPRHVRQRGHGHSSCT
VRGEARSHESSQGAAQRH*(-)
MRNVHDHVAEHVEETAVGVVREAVAALGRQSRRHLVVQPQVQHRVHHPRHRHQNNIFPLGMPCF
SILGSEYNLAHSSPR*(+)
						
					

						Sponge-miRNAs
						
							osa-miR2922 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	20972983-20969354(-) 20969384-20971324(-) 20971385-20969432(+)
Potential amino acid sequence	MPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRFLDMFGNVVMDIPHALFEEKLEAMKAVK GLHNDTDLTATDLKELVAQYKDVYVEAKGEPFPSDPKKQLQLAVLAVFNSWDSPRAIKYRSINK ITGLKGTAVNVQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLVNAQGEDVVAGIRTPEDLD AMRDHMPEPYEELVENCKILESHYKEMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNE GLVERRTALKMVEPGHLDQLLHPQFENPSGYKDKVIATGLPASPGAAVGQIVFTAEDAEAWHAQ GKDVILVSMPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRFLDMFGNVVMDIPHALFEEK LEAMKAVKGLHNDTDLTATDLKELVAQYKDVYVEAKGEPFPSDPKKQLQLAVLAVFNSWDSPRA IKYRSINKITGLKGTAVNVQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLVNAQGEDVVAG IRTPEDLDAMRDHMPEPYEELVENCKILESHYKEMMDIEFTVQENRLWMLQCRTGKRTGKGAVK IAVDMVNEGLVERRTALKMVEPGHLDQLLHPQFENPSGYKDKVIATGLPASPGAAVGQIVFTAE DAEAWHAQGKDVILVSMPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRFLDMFGNVVMDI PHALFEEKLEAMKAVKGLHNDTDLTATDLKELVAQYKDVYVEAKGEPFPSDPKKQLQLAVLAVF NSWDSPRAIKYRSINKITGLKGTAVNVQTMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLVNA QGEDVVAGIRTPEDLDAMRDHMPEPYEELVENCKILESHYKEMMDIEFTVQENRLWMLQCRTGK RTGKGAVKIAVDMVNEGLVERRTALKMVEPGHLDQLLHPQFENPSGYKDKVIATGLPASPGAAV GQIVFTAEDAEAWHAQGKDVILVSMPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRFLDM FGNVVMDIPHALFEEKLEAMKAVKGLHNDTDLTATDLKELVAQYKDVYVEAKGEPFPSDPKKQL QLAVLAVFNSWDSPRAIKYRSINKITGLKGTAVNVQTMVFGNMGNTSGTGVLFTRNPSTGEKKL YGEFLVNAQGEDVVAGIRTPEDLDAMRDHMPEPYEELVENCKILESHYKEMMDIEFTVQENRLW MLQCRTGKRTGKGAVKIAVDMVNEGLVERRTALKMVEPGHLDQLLHPQFENPSGYKDKVIATGL PASPGAAVGQIVFTAEDAEAWHAQGKDVIL(-) MACPRERCYSGVDAGDDGHGAEPGAERRGGGGTGGQERRPLRVRLLPPFPRHVRQRGHGHSSCT VRGEARSHESSQGAAQRH(-) MRNVHDHVAEHVEETAVGVVREAVAALGRQSRRHLVVQPQVQHRVHHPRHRHQNNIFPLGMPCF SILGSEYNLAHSSPR(+)
Sponge-miRNAs	osa-miR2922
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA018078_circ_g.5

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