Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0349401_circ_g.1 |
ID in PlantcircBase | osa_circ_023480 |
Alias | Os04circ03003/Os_ciR2293 |
Organism | Oryza sativa |
Position | chr4: 16639497-16641971 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ui-circRNA |
Identification method | SMALT, Segemehl, find_circ |
Parent gene | Os04g0349401 |
Parent gene annotation |
Hypothetical conserved gene. (Os04t0349401-00) |
Parent gene strand | - |
Alternative splicing | Os04g0349401_circ_g.2 Os04g0349401_circ_g.3 Os04g0349401_circ_g.4 Os04g0349401_circ_g.5 |
Support reads | 2/5 |
Tissues | leaf and panicle/root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os04t0349401-00:4 |
Conservation Information | |
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Conserved circRNAs | osi_circ_014257 |
PMCS | 0.205273067 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015;Ye et al., 2015 |