Splice junction sequence |
TCTTTGCTCATGTATAAACCTTGTTGTGGCTTTGTGTATCTTTCGTCCACAATCTGTCTCTTCC TTCCCAGCTTATTACCCATTTCGTCTCTTTAAATGCctgcagcagaaccatactctgtatcaag agtcgctgcactagtgctagaactagaagaatatgactccagacgtttctgcattctttcttca tcatcttc
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 552 Transcript exons: 5861336-5861486,5861585-5861666,5861756-5861801,5861890- 5861941,5862038-5862258 CTGCAGCAGAACCATACTCTGTATCAAGAGTCGCTGCACTAGTGCTAGAACTAGAAGAATATGA CTCCAGACGTTTCTGCATTCTTTCTTCATCATCTTCAACTTCCTTCTGCCTCATCCTTATTTTG GCTTCTATAACTCGCTGCTCTTCAATTTGTTCAAAGCTCTTCTCCTCTTTAGTTTTCCCTCCAC GATACTCGACAGCATAATTGGATGTTTTGCAAAAAGGGCATTGAGTAGGTTGAGCTGAATTAGG ACTCTTCATCCGCAGAAAGCATTCTGTACAAATGCTTTTCATACAACATCTTGACCTATTAAGA CTCGGATAATACAGAAAGCAAATAGGACATTCTTCAAGATCATGATGGGAGGAGGGGGTTTCTT CAAGACCAGGATAACAAGGAGCAAGCTTAGACTCTAAGATGAGTTTCTTAAGCTTTTTAATGTC AACATCTTTGCTCATGTATAAACCTTGTTGTGGCTTTGTGTATCTTTCGTCCACAATCTGTCTC TTCCTTCCCAGCTTATTACCCATTTCGTCTCTTTAAATGC
|
Genomic sequence |
CTGCAGCAGAACCATACTCTGTATCAAGAGTCGCTGCACTAGTGCTAGAACTAGAAGAATATGA CTCCAGACGTTTCTGCATTCTTTCTTCATCATCTTCAACTTCCTTCTGCCTCATCCTTATTTTG GCTTCTATAACTCGCTGCTCTTCCTTCATAACACAGAGATAACAATATTGGCAGAATCAGCCAG TAATTCCATCACATACTCTTAAAAACAATACTGTTTCAAGATTTAAGTCTGGCTTACAATTTGT TCAAAGCTCTTCTCCTCTTTAGTTTTCCCTCCACGATACTCGACAGCATAATTGGATGTTTTGC AAAAAGGGCATCTTACATATGATAAGGAGGACTCAAAAGTAGACATTTTCATATGTAAAGAAGA CCAAAAGCTTAATGCAAACTATAAGAAAAAGGATACTGAGTAGGTTGAGCTGAATTAGGACTCT TCATCCGCAGAAAGCATTCTGTATAAAACCAAACACAAAGTCAATGACTACACCGGATAAGAAA CATTCTATAGTTCAGAGATGACTAACAAATACATTTCTTCACCTGTACAAATGCTTTTCATACA ACATCTTGACCTATTAAGACTCGGATAATACTAGAAACACAGAAGAACAAAAAATTGCATGAGA GTTGGTCAATTTCATCTTCTTGAATGAGGAAGTAAGCAAAAAAGGAAAGACTTAAAACAAACCA GAAAGCAAATAGGACATTCTTCAAGATCATGATGGGAGGAGGGGGTTTCTTCAAGACCAGGATA ACAAGGAGCAAGCTTAGACTCTAAGATGAGTTTCTTAAGCTTTTTAATGTCAACATCTTTGCTC ATGTATAAACCTTGTTGTGGCTTTGTGTATCTTTCGTCCACAATCTGTCTCTTCCTTCCCAGCT TATTACCCATTTCGTCTCTTTAAATGC |