Splice junction sequence |
TCTTTGCTCATGTATAAACCTTGTTGTGGCTTTGTGTATCTTTCGTCCACAATCTGTCTCTTCC TTCCCAGCTTATTACCCATTTCGTCTCTTTAAATGCcttgtaacctgagggtggtgagatggaa gacatgattcttgagatgaaacaatttcctcatcatcctctgcgtaaaagctactgattgagat tgcgaacc
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 619 Transcript exons: 5861173-5861239,5861336-5861486,5861585-5861666,5861756- 5861801,5861890-5861941,5862038-5862258 CTTGTAACCTGAGGGTGGTGAGATGGAAGACATGATTCTTGAGATGAAACAATTTCCTCATCAT CCTCTGCAGCAGAACCATACTCTGTATCAAGAGTCGCTGCACTAGTGCTAGAACTAGAAGAATA TGACTCCAGACGTTTCTGCATTCTTTCTTCATCATCTTCAACTTCCTTCTGCCTCATCCTTATT TTGGCTTCTATAACTCGCTGCTCTTCAATTTGTTCAAAGCTCTTCTCCTCTTTAGTTTTCCCTC CACGATACTCGACAGCATAATTGGATGTTTTGCAAAAAGGGCATTGAGTAGGTTGAGCTGAATT AGGACTCTTCATCCGCAGAAAGCATTCTGTACAAATGCTTTTCATACAACATCTTGACCTATTA AGACTCGGATAATACAGAAAGCAAATAGGACATTCTTCAAGATCATGATGGGAGGAGGGGGTTT CTTCAAGACCAGGATAACAAGGAGCAAGCTTAGACTCTAAGATGAGTTTCTTAAGCTTTTTAAT GTCAACATCTTTGCTCATGTATAAACCTTGTTGTGGCTTTGTGTATCTTTCGTCCACAATCTGT CTCTTCCTTCCCAGCTTATTACCCATTTCGTCTCTTTAAATGC
|
Genomic sequence |
CTTGTAACCTGAGGGTGGTGAGATGGAAGACATGATTCTTGAGATGAAACAATTTCCTCATCAT CCTCTGCGTAAAAGCTACTGATTGAGATTGCGAACCAAGAATAACAAAAGTGGTAAAATTTAAC ACATGTTGAAAGTTGAAACCGAGAGAAGAACTAACCTGCAGCAGAACCATACTCTGTATCAAGA GTCGCTGCACTAGTGCTAGAACTAGAAGAATATGACTCCAGACGTTTCTGCATTCTTTCTTCAT CATCTTCAACTTCCTTCTGCCTCATCCTTATTTTGGCTTCTATAACTCGCTGCTCTTCCTTCAT AACACAGAGATAACAATATTGGCAGAATCAGCCAGTAATTCCATCACATACTCTTAAAAACAAT ACTGTTTCAAGATTTAAGTCTGGCTTACAATTTGTTCAAAGCTCTTCTCCTCTTTAGTTTTCCC TCCACGATACTCGACAGCATAATTGGATGTTTTGCAAAAAGGGCATCTTACATATGATAAGGAG GACTCAAAAGTAGACATTTTCATATGTAAAGAAGACCAAAAGCTTAATGCAAACTATAAGAAAA AGGATACTGAGTAGGTTGAGCTGAATTAGGACTCTTCATCCGCAGAAAGCATTCTGTATAAAAC CAAACACAAAGTCAATGACTACACCGGATAAGAAACATTCTATAGTTCAGAGATGACTAACAAA TACATTTCTTCACCTGTACAAATGCTTTTCATACAACATCTTGACCTATTAAGACTCGGATAAT ACTAGAAACACAGAAGAACAAAAAATTGCATGAGAGTTGGTCAATTTCATCTTCTTGAATGAGG AAGTAAGCAAAAAAGGAAAGACTTAAAACAAACCAGAAAGCAAATAGGACATTCTTCAAGATCA TGATGGGAGGAGGGGGTTTCTTCAAGACCAGGATAACAAGGAGCAAGCTTAGACTCTAAGATGA GTTTCTTAAGCTTTTTAATGTCAACATCTTTGCTCATGTATAAACCTTGTTGTGGCTTTGTGTA TCTTTCGTCCACAATCTGTCTCTTCCTTCCCAGCTTATTACCCATTTCGTCTCTTTAAATGC |