Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d018562_circ_g.1 |
ID in PlantcircBase | zma_circ_008855 |
Alias | zma_circ_0002033 |
Organism | Zea mays |
Position | chr5: 223268615-223272983 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d018562 |
Parent gene annotation |
Callose synthase 3 |
Parent gene strand | + |
Alternative splicing | Zm00001d018562_circ_igg.1 Zm00001d018562_circ_g.2 Zm00001d018562_circ_g.3 Zm00001d018562_circ_g.4 Zm00001d018563_circ_ig.1 Zm00001d018565_circ_igg.1 Zm00001d018565_circ_g.1 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d018562_T003:10 Zm00001d018562_T006:10 Zm00001d018562_T007:4 Zm00001d018562_T005:9 Zm00001d018562_T001:10 Zm00001d018562_T002:12 Zm00001d018562_T004:10 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.077104782 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |