Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d018562_circ_g.1 |
| ID in PlantcircBase | zma_circ_008855 |
| Alias | zma_circ_0002033 |
| Organism | Zea mays |
| Position | chr5: 223268615-223272983 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | find_circ |
| Parent gene | Zm00001d018562 |
| Parent gene annotation |
Callose synthase 3 |
| Parent gene strand | + |
| Alternative splicing | Zm00001d018562_circ_igg.1 Zm00001d018562_circ_g.2 Zm00001d018562_circ_g.3 Zm00001d018562_circ_g.4 Zm00001d018563_circ_ig.1 Zm00001d018565_circ_igg.1 Zm00001d018565_circ_g.1 |
| Support reads | NA |
| Tissues | leaf, root |
| Exon boundary | Yes-No |
| Splicing signals | GT-AG |
| Number of exons covered | Zm00001d018562_T003:10 Zm00001d018562_T006:10 Zm00001d018562_T007:4 Zm00001d018562_T005:9 Zm00001d018562_T001:10 Zm00001d018562_T002:12 Zm00001d018562_T004:10 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.077104782 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Ma et al., 2021b |