Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d011713_circ_g.8 |
ID in PlantcircBase | zma_circ_002837 |
Alias | circ1331 |
Organism | Zea mays |
Position | chr8: 159566344-159566900 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d011713 |
Parent gene annotation |
Myosin family protein with Dil domain |
Parent gene strand | - |
Alternative splicing | Zm00001d011713_circ_g.9 Zm00001d011713_circ_g.10 Zm00001d011713_circ_g.11 |
Support reads | 13 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d011713_T016:3 Zm00001d011713_T003:3 Zm00001d011713_T013:3 Zm00001d011713_T006:3 Zm00001d011713_T004:3 Zm00001d011713_T015:3 Zm00001d011713_T017:3 Zm00001d011713_T008:3 Zm00001d011713_T007:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.12856933 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |