Splice junction sequence |
GTTTACTAACAGGATAGGTAAAACCAGGGACTTGTATGACCGAACATCCATTGAAATATTGCGA AAAACGCTCAGCATCAATTGTTGCACTCATGAGTACctggatctttagagtttaagctgcaggc agatgcatctgcagggacaaaccctctttgagacagttcattctgaagttgtttcctcatgctt gatagcat
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 1720 Transcript exons: 178189030-178189588,178189730-178190890 CTGGATCTTTAGAGTTTAAGCTGCAGGCAGATGCATCTGCAGGGACAAACCCTCTTTGAGACAG TTCATTCTGAAGTTGTTTCCTCATGCTTGATAGCATATTCATGATGTTTGAAGAGACAAAGTAC TTCGCACAAAATTGAGAATCTTGGCCTCTATCTTTGGCATGCCTCCAGAAGTCAAATGCCGCGA CAACAGCAAGTTGGTCGCTGAACCCACCATACAACGAAGCAAGCTCAACTTTCGCTGCAGCTGC CCTTTTCCTCTCATCAGGCGCTACTGGAAGGACAAATGGATCTCTATAATCAGCTGCACATGCC AATGTCAATGCTGGATCCAGGCAGTTCATTAATATAGCAAACAGGAGCATCTTGGTGGTGGATG GATGGACTGGCAGGGAACCCAGCTTTTCTCCTAATTCTGTTAGTTGTTCGTCTTGTGTTAAAGC ACCAAGATCCTGAAGCACAGCAATAGCATTTCTTACAGTTTCTGGAATTGGAGGGTCCAAGGTT TTCTTCAGAAAGTCTGCTATTCTGCAGTTTGAATCAAGCAGTTTGACCTGCAAACAAAGTTCCT CAATGGGCATTCTTTTTATTTCAGGAATTTGGTAGTCTGGCAAGGATGAAGCTCTAAACCTTGA GTAAAGATGATAGCAAGTTCCTGGCTGACATCGGCCAGCACGCCCTTCGCGTTGTCTTGCACTG GCTTTTGAAACCCAAGAAGCATGAAGTGTGGACACATTATTGTATGGATCATAACTTTTCTCTT TCATTCTCCCACTATCTATGACAAACACAACATCATCAATTGTCACAGCAGTCTCTGCAATATT AGTTGAGAGAATAATTTTACGAACCCCCACTGGTGGACGTTTGAAAACCTTTTTCTGCTCTGAG GACGGGATCATAGAATGAAGAGACAACACAAGAAATCTTGATGAATCCTGAAAGAATGGAGAAG CAAATAATCTTTCACGTGTTTGACTGATATCTTCCCAGCCAGGAAGGAATACCAAGATGGCTCC TTCATTGGAATCCACACAAATTTTTCGAAGCAGCCGTTCAATTAGCAGAGTATCAATGTGCTCT GGATTAATAGATGCCAAGTACTTGTTAAGCAGCTCGTTATCTTCAGTTGATTTTTCTGAACTAC ACTCCATATGTTTCTTTATTACTTCACAGACCTCTTGTTGATTCTCTTGTTGTGCCCAATCTAA TGCGGATTTTCCATCATGATCCTGTGCTGAACAATCCACACCAAAAGATAAAAGCATACAGACG TCCCCAAGCTGACCCTTCATAGCAAAAACCATTAAAGGAGTTATACCAGTCTCTGAATGCTGGT AATTGTAGACTTCTGTGTTCTGCTCTGCAGAAATAAGCTCAAGAAGAGGATCAAATTCATCATT GACCAAAGCCAGATTAATTGAATCATCCATTGAGCTTTTGAAATCGTGAGTTAAAACGCTGCCC TCTGTTTTATGACTGGTAAGATGGTTATCACCTGCAGACTGCAGAATAGAAAGCACATCCTCCA AATAGAAAGTTTTGACCTGAGGGGGGAAAAAGTTATAACTTCCAAAAATAATTTCAGATCGCTT AATGTATTCAATCTGAGAGAGTTTACTAACAGGATAGGTAAAACCAGGGACTTGTATGACCGAA CATCCATTGAAATATTGCGAAAAACGCTCAGCATCAATTGTTGCACTCATGAGTAC
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Genomic sequence |
CTGGATCTTTAGAGTTTAAGCTGCAGGCAGATGCATCTGCAGGGACAAACCCTCTTTGAGACAG TTCATTCTGAAGTTGTTTCCTCATGCTTGATAGCATATTCATGATGTTTGAAGAGACAAAGTAC TTCGCACAAAATTGAGAATCTTGGCCTCTATCTTTGGCATGCCTCCAGAAGTCAAATGCCGCGA CAACAGCAAGTTGGTCGCTGAACCCACCATACAACGAAGCAAGCTCAACTTTCGCTGCAGCTGC CCTTTTCCTCTCATCAGGCGCTACTGGAAGGACAAATGGATCTCTATAATCAGCTGCACATGCC AATGTCAATGCTGGATCCAGGCAGTTCATTAATATAGCAAACAGGAGCATCTTGGTGGTGGATG GATGGACTGGCAGGGAACCCAGCTTTTCTCCTAATTCTGTTAGTTGTTCGTCTTGTGTTAAAGC ACCAAGATCCTGAAGCACAGCAATAGCATTTCTTACAGTTTCTGGAATTGGAGGGTCCAAGGTT TTCTTCAGAAAGTCTGCTATTCTGCAGTTTGAATCAAGCAGTTTGACCTGCAGCATGGCCAATG TTTAAAGAAACAGCACTGAGTAACTAAAAAGTAACAAGTACTTTAATCGCAGTTCCATGAAATA GTTCATGACATTGTTTTCATTGAATATTAGGGACAAACTAAATATAAACAAACAGCTTACCTGC AAACAAAGTTCCTCAATGGGCATTCTTTTTATTTCAGGAATTTGGTAGTCTGGCAAGGATGAAG CTCTAAACCTTGAGTAAAGATGATAGCAAGTTCCTGGCTGACATCGGCCAGCACGCCCTTCGCG TTGTCTTGCACTGGCTTTTGAAACCCAAGAAGCATGAAGTGTGGACACATTATTGTATGGATCA TAACTTTTCTCTTTCATTCTCCCACTATCTATGACAAACACAACATCATCAATTGTCACAGCAG TCTCTGCAATATTAGTTGAGAGAATAATTTTACGAACCCCCACTGGTGGACGTTTGAAAACCTT TTTCTGCTCTGAGGACGGGATCATAGAATGAAGAGACAACACAAGAAATCTTGATGAATCCTGA AAGAATGGAGAAGCAAATAATCTTTCACGTGTTTGACTGATATCTTCCCAGCCAGGAAGGAATA CCAAGATGGCTCCTTCATTGGAATCCACACAAATTTTTCGAAGCAGCCGTTCAATTAGCAGAGT ATCAATGTGCTCTGGATTAATAGATGCCAAGTACTTGTTAAGCAGCTCGTTATCTTCAGTTGAT TTTTCTGAACTACACTCCATATGTTTCTTTATTACTTCACAGACCTCTTGTTGATTCTCTTGTT GTGCCCAATCTAATGCGGATTTTCCATCATGATCCTGTGCTGAACAATCCACACCAAAAGATAA AAGCATACAGACGTCCCCAAGCTGACCCTTCATAGCAAAAACCATTAAAGGAGTTATACCAGTC TCTGAATGCTGGTAATTGTAGACTTCTGTGTTCTGCTCTGCAGAAATAAGCTCAAGAAGAGGAT CAAATTCATCATTGACCAAAGCCAGATTAATTGAATCATCCATTGAGCTTTTGAAATCGTGAGT TAAAACGCTGCCCTCTGTTTTATGACTGGTAAGATGGTTATCACCTGCAGACTGCAGAATAGAA AGCACATCCTCCAAATAGAAAGTTTTGACCTGAGGGGGGAAAAAGTTATAACTTCCAAAAATAA TTTCAGATCGCTTAATGTATTCAATCTGAGAGAGTTTACTAACAGGATAGGTAAAACCAGGGAC TTGTATGACCGAACATCCATTGAAATATTGCGAAAAACGCTCAGCATCAATTGTTGCACTCATG AGTAC |