Splice junction sequence |
TGCAGAGATTTGGAAAGCAATATCAACTTTGCTAATGAAGCTCAGTTCTTGTTAATCTCCGAGG AGAGTGTTGCTGACCTAAACAGAAGATTAGAAGCAAgtgcctgagatgtctcttataaaaacct ttatcgaccttgaggaaggactactgtctgtagaatcttctcgctgcgaagacaagttgcacat cagaatca
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 385 Transcript exons: 5664137-5664288,5664358-5664590 GTGCCTGAGATGTCTCTTATAAAAACCTTTATCGACCTTGAGGAAGGACTACTGTCTGTAGAAT CTTCTCGCTGCGAAGACAAGTTGCACATCAGAATCAAGTCTGATTCATATAACCCGAGGAACGA TGAGTTTGATTCACATGCCAACATACTTGAAAACCGTAATGAGGAAACTAGAATCAATCGTTGG TTCACCAATGCCATTGGTCGACAATGCAAGTTGCTACGGTATTCTAGCTCTACTTCCAAAGACT GCTTGAACAGAAACAAGAGTCCTGGTTTGTGCAGAGATTTGGAAAGCAATATCAACTTTGCTAA TGAAGCTCAGTTCTTGTTAATCTCCGAGGAGAGTGTTGCTGACCTAAACAGAAGATTAGAAGCA A
Transcript length: 454 Transcript exons: 5664137-5664590 GTGCCTGAGATGTCTCTTATAAAAACCTTTATCGACCTTGAGGAAGGACTACTGTCTGTAGAAT CTTCTCGCTGCGAAGACAAGTTGCACATCAGAATCAAGTCTGATTCATATAACCCGAGGAACGA TGAGTTTGATTCACATGCCAACATGTATGCATTGCTCCTTATCATGTGCTGTCTTACATCAGCT GCTTGTAATAAATTTGATTTTGGTTGCAGACTTGAAAACCGTAATGAGGAAACTAGAATCAATC GTTGGTTCACCAATGCCATTGGTCGACAATGCAAGTTGCTACGGTATTCTAGCTCTACTTCCAA AGACTGCTTGAACAGAAACAAGAGTCCTGGTTTGTGCAGAGATTTGGAAAGCAATATCAACTTT GCTAATGAAGCTCAGTTCTTGTTAATCTCCGAGGAGAGTGTTGCTGACCTAAACAGAAGATTAG AAGCAA
|
Genomic sequence |
GTGCCTGAGATGTCTCTTATAAAAACCTTTATCGACCTTGAGGAAGGACTACTGTCTGTAGAAT CTTCTCGCTGCGAAGACAAGTTGCACATCAGAATCAAGTCTGATTCATATAACCCGAGGAACGA TGAGTTTGATTCACATGCCAACATGTATGCATTGCTCCTTATCATGTGCTGTCTTACATCAGCT GCTTGTAATAAATTTGATTTTGGTTGCAGACTTGAAAACCGTAATGAGGAAACTAGAATCAATC GTTGGTTCACCAATGCCATTGGTCGACAATGCAAGTTGCTACGGTATTCTAGCTCTACTTCCAA AGACTGCTTGAACAGAAACAAGAGTCCTGGTTTGTGCAGAGATTTGGAAAGCAATATCAACTTT GCTAATGAAGCTCAGTTCTTGTTAATCTCCGAGGAGAGTGTTGCTGACCTAAACAGAAGATTAG AAGCAA |