Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G03160_circ_g.6 |
ID in PlantcircBase | ath_circ_000411 |
Alias | Ath_circ_FC0155 |
Organism | Arabidpsis thaliana |
Position | chr1: 765025-765600 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder |
Parent gene | AT1G03160 |
Parent gene annotation |
Probable transmembrane GTPase FZO-like, chloroplastic |
Parent gene strand | + |
Alternative splicing | AT1G03160_circ_g.1 1_circ_ag.2 AT1G03160_circ_g.3 AT1G03160_circ_g.4 AT1G03160_circ_g.5 1_circ_igg.7 1_circ_ig.1 |
Support reads | 23 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G03160.1:2 AT1G03160.4:2 AT1G03160.2:2 AT1G03160.3:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.30288635 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017;Chen et al., 2017a |