Plant Circular RNA Database

Detail information of Solyc05g018650.2_circ_g.3

			
						 General Information
					
						CircRNA Name
						Solyc05g018650.2_circ_g.3
					
						ID in PlantcircBase
						sly_circ_001735
					
						Alias
						Slcirc076
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr5: 22688256-22693249  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						Segemehl, CIRI
					
						Parent gene
						
							Solyc05g018650.2						
					
						Parent gene annotation
						
							Ferrochelatase
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Solyc05g018650.2_circ_g.1 Solyc05g018650.2_circ_g.2 Solyc05g018650.2_circ_g.4 Solyc05g018650.2_circ_g.5 						
					
						Support reads
						62
					
						Tissues
						fruit/leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc05g018650.2.1:5

General Information
CircRNA Name	Solyc05g018650.2_circ_g.3
ID in PlantcircBase	sly_circ_001735
Alias	Slcirc076
Organism	Solanum lycopersicum
Position	chr5: 22688256-22693249 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	Segemehl, CIRI
Parent gene	Solyc05g018650.2
Parent gene annotation	Ferrochelatase
Parent gene strand	-
Alternative splicing	Solyc05g018650.2_circ_g.1 Solyc05g018650.2_circ_g.2 Solyc05g018650.2_circ_g.4 Solyc05g018650.2_circ_g.5
Support reads	62
Tissues	fruit/leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc05g018650.2.1:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATATACTCTCTAATAGGCGAAGGCTTGAACCACTCGTAGATATTGAAAACTGTGGATAAAGAGG
GAGAACAACAAGCTTTGTGATTCCATCCCTTTTAATctggcgagcttcaagatttgagactgcc
attgctccaacatatggaagactttcaatcactgcatctgccaaatctgaaatgaaagtgggtt
caacacct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 687
Transcript exons: 22688256-22688457,22688560-22688660,22692128-22692280,22
692929-22693055,22693146-22693249
CTGGCGAGCTTCAAGATTTGAGACTGCCATTGCTCCAACATATGGAAGACTTTCAATCACTGCA
TCTGCCAAATCTGAAATGAAAGTGGGTTCAACACCTAGGGCAGGAACACGTGCCCAGTTCTGTA
TTCCAGACTCCAATGCTAGCTCCTTGTATTCAACATCAATTTCCTCTAATGTCTCAATATGCTC
ACTTACAAAACTTATTGGCACGGCAAGAAGACTCTTTACCCCTTTTTTCCCAAGCTCAATTATT
GTCTCATCAGTATATGGTTTAAGCCATTCAACAGGTCCAACCCTACTCTGATATGCCAAAGTAT
ATGCATTATGTACCCTTCTCTTCTCAAGTTCTTCCATTATTAAGTCCACACATTCCTCCATCTC
AGCCTTGTATGGATCACCTGCTTCCTCTACATATGCAAGTGGTACACCATGAGCACTGAAGAAT
ATCATCACCTCCTCCGGACGTTCAAACATGTTCAACTCTTTTTCCATCAAATCTGCCATGGCTT
TGATATATCCTTCCCGTTGATACCATGAGGGTATTACTGTGTGTTGCATGTTAACAAGATACTC
ATCCTCCCTAAATATACTCTCTAATAGGCGAAGGCTTGAACCACTCGTAGATATTGAAAACTGT
GGATAAAGAGGGAGAACAACAAGCTTTGTGATTCCATCCCTTTTAAT
						
					

						Genomic sequence
						
							CTGGCGAGCTTCAAGATTTGAGACTGCCATTGCTCCAACATATGGAAGACTTTCAATCACTGCA
TCTGCCAAATCTGAAATGAAAGTGGGTTCAACACCTAGGGCAGGAACACGTGCCCAGTTCTGTA
TTCCAGACTCCAATGCTAGCTCCTTGTATTCAACATCAATTTCCTCTAATGTCTCAATATGCTC
ACTTACAAAACTGTGATAACATATAAAAATTAGAGAATACAAATAACTAAAACAAAAGTCGAAC
AAACTAGGCATCATCATTTGTACTGCTTAAACAGCCAAATTTGCTTACCTTATTGGCACGGCAA
GAAGACTCTTTACCCCTTTTTTCCCAAGCTCAATTATTGTCTCATCAGTATATGGTTTAAGCCA
TTCAACAGGTCCAACCCTACTCTGCATCAGAGCAAAATAACTTCATGGAATGGCTGAGTAAAAG
CATTTACAAAACTCAATCATGATGCTCTTAAGTGAGAAAAGCTGCATCCATATGCATACAGAAT
TACAGTAAAGCACATCAGTTCAGTAAGTCATGTATCCGAAATGCCACCGGTAAATACTTGTTTT
GAAGTCGATCCAAGAAAATAACTTTTATTTTTATGACAGTGGTGTCCGTACAGCTTGCGCGCAC
TCTCGAGTACTCCATCACAACCTGCTACCTTCCACCAACACATGTACCGGTTAACACTGTCCAC
CAACACTTAGGTAGATGGAAAGAAATCACCTAGTGTTTTTGCCTGTACTGAGATTTGAACTTTG
AGAGCTCAAGAAAATAACTTGTTTTTTGCATCCAAATAACTTATCAATGCCAGATGGAATCAAA
ATCACTTGACCACATACTCTATCACCCAAGCAAATTGGAGAATCAATGTTACAAAAGCTATATA
TTATGTGCTAGCAAATGAGCATCCAAGCCTCATCTATTTTTCTCGTCCAATAGTGTATCACTTG
ACAACATCATAAATATGAATCACCTTTCCTTAGAAATGTATTAAACAAATAATAATAAGCACCA
AATATCATGTTTGTGCCGATGGAAACACATAATACGACATTGAATGTAGCACCCTCTAAGTTCA
TAAAATTGACACCAATAAAGGGCCACATTACCTTCTCATACATAGAGGTGTTATGCTTATAACA
TGAAAGTGTTCAGTACTCGTGTCTCACACTCCATATTAGCTAATTATATTTGTAATGCAACTTA
GAAAGTTCATATGGTACAACATGATACTTCAATAGAAAGTAGCAATTAGTCCCCTCAACTATTG
TTGCGGAAAAAGTGTGTACAAAGGAAAAAAGCTTCTTCATGTTCATACTAATAGTTACGCACGT
ACTCCTTTACATACTAACATGGAGTGCTTAATATGTTATTCTCAAGTTCACCATATAATCTAAT
TCTCTTATCAACCTTATAGATTGAAGAGGTGATATGGAGATAGTTTTGCCAACAATGCATGTCA
TGCATGATACTATTATACATATCATTTCTGTAACGCCCCGTACTTTTGGTCTAAGGTTTAAATG
GTTCGACGTATGTAATTGGACCCCAACCTGGAGAATTTGGTTTTACATGTCTAAAAGGCAATGT
TTAAGTATGCGGTGTTAAGGATGTGAATTAAAGTCTAACGGAAACTCTAGCACAAAGTCGGCTT
GAAAACTTCTCCACAAATTAAGTTTTAAGCTTGCACAAGGTGTAACTTCTAGCAAGCATATCTC
CCATGTATAAAGATTTATATGATGAATTTCCTACCATAGTTAAAAGATCACTGAATCTAGTTTC
CAATGAATTAAATAGTTCGTCAATCAGAGCTATGTACAAGAAGTTATGTACGTTTTACAAAAGT
GATATTAGTGGATAACATGTAGGGGCCTACGGGCATAGGTTGCCGTAGGAACTATATGTGGATT
AAAGTTTGAGGTAGCCTCAGAAACATTTAGGTGCCCACCTACGACCATATGTGGCCATCTATCA
ACTTCATTAAATACACCAAACTCTGAGGGTTTACTTCATTTTCTCACTTCGACCTTGACTTGAA
ATAGATTCTCTCAGCTCCACTCCCCTAATCCCCACGGTCTTTCATGAGTGTTTCTTCAATGATT
ACGCAACTCTAACACCTCTTCCTCTTCAAATTTTGGAGGGTGTTATCATCTAGGGCTAAAGCGG
AGATTTTTGGTTTTTCTTCATCATTCAAGGTAAGAATCTTCTCCTAAGCTCATGCATGGACTAT
TATTGATGTAACATGAATGTTTCAGGGAAGGGACTCATGGGATGGTGATCGAAAGCCATGAGCT
TGGGTTTTGGATAATTTTGTGAGAAGATGGGGCTTGTTATGGTAGAGAGTTCTTGATATGCTGC
TGCCTAGAGGGGTGTGGACGACCTCGTAAGAGGGTTGTTGTGTTATTGTTGTGTTGAAGAATGA
AAAAGTCTTACATCGAGGGTTAATGAGATGGTTGGTCTACTTATAAGGCTTTGCAATCCTCTTT
CCTTTGAGCTATCTTTTGGGGTATTCTATAGGCCCAAGACCTAATTTTACATGGTATCAGAGCA
AAAGCAGGACCCATTTCACCCAATGTTGAGCCCTCAAATTAAAATTTTCCGCACAAGATGTCCA
GCCCTAGGCGTGAGGTGAGGTGTTGAAGTATGAAGAAGTATCACATTGGTGGTCTCCTTATAAA
GCTAAGACAATCCTCTTCGTTTTGAGCTAGCTTTTAGGGGGTGAGTTAGGTTCAAGATTGCAAG
ACCTAATTTTACAGTTTGCAAGGAGAAGGTTGATTGTGGATATGCCAATGAAAAAGGATTTTAG
AGTTTTAGCTCACCGTATGTGCGATAAATTGCTTAAGTGGCTTTGTCTTGAATCTCTTTACTAA
TTTAATCTTTTTATGATTGTTTTCTTGTAGATTAAGGTCTTATCAGAGTAGTTAGACTTTGTGG
TACACTTAAGGTTGAAATTGAGGAATTAAAGCTAAGACCCTCTTTTCCTTGTCATGACATGATC
TTATGATCTTTCTTTCGGTATTTTCCCCTTGTTCATGAGCTTATGGATTTCATGTTCCAAATTA
TACTATTGAGTACTCTATGTGAAAATTCTTTCATGTCAAATTATACTATTTTTTATTTCATTTT
TATAACTGAGAAATCCGTGTTGACCCGCCCTTTGGACCAAACACAGCCATCTAAACTACGTGGA
TAATGGGCCCGCCCCTCTACCCTTCTCCACTTAAATACTGAGCTTTGCTTTGCATGGAGTGGGG
CTTGAACCTGCGACCTAAACCTCAAATCCTCCACCTTTTGTCACTCAAGCTAGGTCTTGGGGGC
ATGTCAAACTATACTATTAGCCTTGAATAATTTTAGCTTCCTATTATCGTTTTCTTGTAGATTA
AGGTCTTATCTGAGTAGTCGGTCTTTGTGGCCCGCCCGTTCACCCTTTTCATGACATGATCTTT
CTTTCGATACATTCCCCCTTGATCTTTCTTAGTAGTTGTATTCATTGCCTTGTGTCTACCATAC
CTTCATGCCGAGTTCATTAGCTCCTCATGGATATGTCTAATGTCATACATATCAAAATTGACAC
ATTTCTACCTAAAAGTTATGTCTAAGAACAAGGAAATGCTTTGTAAGCCGAAGGCACGAAATAG
TAAGTGCTGTCCATGTGCACTCAACTGAACACCAACTGAACTCTTGACCTTTCTTATAAATGAT
CATAAAGATGAGCCCAAATACAAAATGTGCAAGAAGCCAGAGTCTTCATCTTCATTACAAGAAT
GTTTTAATGCATAAGATAGACAATGTCACCTGTGCAAGTGTGTTTAAATATAATCATTTGTAAA
ATGTAAGTATGCTAATAGATCTGCAAAGGTACCTGATATGCCAAAGTATATGCATTATGTACCC
TTCTCTTCTCAAGTTCTTCCATTATTAAGTCCACACATTCCTCCATCTCAGCCTTGTATGGATC
ACCTGCTTCCTCTACATATGCAAGTGGTACACCATGAGCACTGAAGAATATCATCACCTGTGTA
TATGAAGCTAGTTAATGCAGGAGACAAATTAGAGAGATTTTTCTACTTCTTGGGAAGACCCTGC
TTTTATTTTCATTATAAAATATCTGAAAATTTTTCATAAATATGAAATGTAGAGGAGTAGAGGC
AGGAACAGAACAGTGTCAGATCTGAATAAAAGAAATCTTTGCTCCAGAGTGCTGTAGTTTTCCT
TTGTTTTTGATCCTTAATATCTTCTACTGTACAGAGATCTTTCCATGGCTCTGTATTTCTACCC
TAACCAACTCGATAGAGTTTCCAGAGAAGGTCTCCAAGCATAAGACTTGATGGACAATAATACA
CTAAATCAAGAGTATCACAACATTCATGACAAGAATCTTTTCTCATTTACTTTTTTGAAACTGG
TAAAATTAAATCTTTAAGCATTTATCTTTATTAAAAAAAAAATCTTACAGCATTTATTACAGAA
GAAAGCAAAACTGAGAAGGCATATACTTTTGCGAGAATTTTCTAGTTTAAGTAATGAAAACAAA
AATAAAAATGCACAACTACTTTATGTGCCTCAAGTATAATACTATCAGGAAGATGAGACCTTAT
TAGGAAAAAGAACTTTTCACGAGGTAAGTATAGCATGAGACATCCAAGAATAGAGACAATACTA
CCTCCTCCGGACGTTCAAACATGTTCAACTCTTTTTCCATCAAATCTGCCATGGCTTTGATATA
TCCTTCCCGTTGATACCATGAGGGTATTACTGTGTGTTGCATGTTAACAAGATACTCATCCTCC
CTGATGTTAATACTCATTGCTCCATATATCAGTTTGACAATCGAAAATGGAATGTATTTTCTGA
ACAGGAACATAGGGTATGTTTATTACCTAAATATACTCTCTAATAGGCGAAGGCTTGAACCACT
CGTAGATATTGAAAACTGTGGATAAAGAGGGAGAACAACAAGCTTTGTGATTCCATCCCTTTTA
AT
						
					

			
		

Sequences
Splice junction sequence	ATATACTCTCTAATAGGCGAAGGCTTGAACCACTCGTAGATATTGAAAACTGTGGATAAAGAGG GAGAACAACAAGCTTTGTGATTCCATCCCTTTTAATctggcgagcttcaagatttgagactgcc attgctccaacatatggaagactttcaatcactgcatctgccaaatctgaaatgaaagtgggtt caacacct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 687 Transcript exons: 22688256-22688457,22688560-22688660,22692128-22692280,22 692929-22693055,22693146-22693249 CTGGCGAGCTTCAAGATTTGAGACTGCCATTGCTCCAACATATGGAAGACTTTCAATCACTGCA TCTGCCAAATCTGAAATGAAAGTGGGTTCAACACCTAGGGCAGGAACACGTGCCCAGTTCTGTA TTCCAGACTCCAATGCTAGCTCCTTGTATTCAACATCAATTTCCTCTAATGTCTCAATATGCTC ACTTACAAAACTTATTGGCACGGCAAGAAGACTCTTTACCCCTTTTTTCCCAAGCTCAATTATT GTCTCATCAGTATATGGTTTAAGCCATTCAACAGGTCCAACCCTACTCTGATATGCCAAAGTAT ATGCATTATGTACCCTTCTCTTCTCAAGTTCTTCCATTATTAAGTCCACACATTCCTCCATCTC AGCCTTGTATGGATCACCTGCTTCCTCTACATATGCAAGTGGTACACCATGAGCACTGAAGAAT ATCATCACCTCCTCCGGACGTTCAAACATGTTCAACTCTTTTTCCATCAAATCTGCCATGGCTT TGATATATCCTTCCCGTTGATACCATGAGGGTATTACTGTGTGTTGCATGTTAACAAGATACTC ATCCTCCCTAAATATACTCTCTAATAGGCGAAGGCTTGAACCACTCGTAGATATTGAAAACTGT GGATAAAGAGGGAGAACAACAAGCTTTGTGATTCCATCCCTTTTAAT
Genomic sequence	CTGGCGAGCTTCAAGATTTGAGACTGCCATTGCTCCAACATATGGAAGACTTTCAATCACTGCA TCTGCCAAATCTGAAATGAAAGTGGGTTCAACACCTAGGGCAGGAACACGTGCCCAGTTCTGTA TTCCAGACTCCAATGCTAGCTCCTTGTATTCAACATCAATTTCCTCTAATGTCTCAATATGCTC ACTTACAAAACTGTGATAACATATAAAAATTAGAGAATACAAATAACTAAAACAAAAGTCGAAC AAACTAGGCATCATCATTTGTACTGCTTAAACAGCCAAATTTGCTTACCTTATTGGCACGGCAA GAAGACTCTTTACCCCTTTTTTCCCAAGCTCAATTATTGTCTCATCAGTATATGGTTTAAGCCA TTCAACAGGTCCAACCCTACTCTGCATCAGAGCAAAATAACTTCATGGAATGGCTGAGTAAAAG CATTTACAAAACTCAATCATGATGCTCTTAAGTGAGAAAAGCTGCATCCATATGCATACAGAAT TACAGTAAAGCACATCAGTTCAGTAAGTCATGTATCCGAAATGCCACCGGTAAATACTTGTTTT GAAGTCGATCCAAGAAAATAACTTTTATTTTTATGACAGTGGTGTCCGTACAGCTTGCGCGCAC TCTCGAGTACTCCATCACAACCTGCTACCTTCCACCAACACATGTACCGGTTAACACTGTCCAC CAACACTTAGGTAGATGGAAAGAAATCACCTAGTGTTTTTGCCTGTACTGAGATTTGAACTTTG AGAGCTCAAGAAAATAACTTGTTTTTTGCATCCAAATAACTTATCAATGCCAGATGGAATCAAA ATCACTTGACCACATACTCTATCACCCAAGCAAATTGGAGAATCAATGTTACAAAAGCTATATA TTATGTGCTAGCAAATGAGCATCCAAGCCTCATCTATTTTTCTCGTCCAATAGTGTATCACTTG ACAACATCATAAATATGAATCACCTTTCCTTAGAAATGTATTAAACAAATAATAATAAGCACCA AATATCATGTTTGTGCCGATGGAAACACATAATACGACATTGAATGTAGCACCCTCTAAGTTCA TAAAATTGACACCAATAAAGGGCCACATTACCTTCTCATACATAGAGGTGTTATGCTTATAACA TGAAAGTGTTCAGTACTCGTGTCTCACACTCCATATTAGCTAATTATATTTGTAATGCAACTTA GAAAGTTCATATGGTACAACATGATACTTCAATAGAAAGTAGCAATTAGTCCCCTCAACTATTG TTGCGGAAAAAGTGTGTACAAAGGAAAAAAGCTTCTTCATGTTCATACTAATAGTTACGCACGT ACTCCTTTACATACTAACATGGAGTGCTTAATATGTTATTCTCAAGTTCACCATATAATCTAAT TCTCTTATCAACCTTATAGATTGAAGAGGTGATATGGAGATAGTTTTGCCAACAATGCATGTCA TGCATGATACTATTATACATATCATTTCTGTAACGCCCCGTACTTTTGGTCTAAGGTTTAAATG GTTCGACGTATGTAATTGGACCCCAACCTGGAGAATTTGGTTTTACATGTCTAAAAGGCAATGT TTAAGTATGCGGTGTTAAGGATGTGAATTAAAGTCTAACGGAAACTCTAGCACAAAGTCGGCTT GAAAACTTCTCCACAAATTAAGTTTTAAGCTTGCACAAGGTGTAACTTCTAGCAAGCATATCTC CCATGTATAAAGATTTATATGATGAATTTCCTACCATAGTTAAAAGATCACTGAATCTAGTTTC CAATGAATTAAATAGTTCGTCAATCAGAGCTATGTACAAGAAGTTATGTACGTTTTACAAAAGT GATATTAGTGGATAACATGTAGGGGCCTACGGGCATAGGTTGCCGTAGGAACTATATGTGGATT AAAGTTTGAGGTAGCCTCAGAAACATTTAGGTGCCCACCTACGACCATATGTGGCCATCTATCA ACTTCATTAAATACACCAAACTCTGAGGGTTTACTTCATTTTCTCACTTCGACCTTGACTTGAA ATAGATTCTCTCAGCTCCACTCCCCTAATCCCCACGGTCTTTCATGAGTGTTTCTTCAATGATT ACGCAACTCTAACACCTCTTCCTCTTCAAATTTTGGAGGGTGTTATCATCTAGGGCTAAAGCGG AGATTTTTGGTTTTTCTTCATCATTCAAGGTAAGAATCTTCTCCTAAGCTCATGCATGGACTAT TATTGATGTAACATGAATGTTTCAGGGAAGGGACTCATGGGATGGTGATCGAAAGCCATGAGCT TGGGTTTTGGATAATTTTGTGAGAAGATGGGGCTTGTTATGGTAGAGAGTTCTTGATATGCTGC TGCCTAGAGGGGTGTGGACGACCTCGTAAGAGGGTTGTTGTGTTATTGTTGTGTTGAAGAATGA AAAAGTCTTACATCGAGGGTTAATGAGATGGTTGGTCTACTTATAAGGCTTTGCAATCCTCTTT CCTTTGAGCTATCTTTTGGGGTATTCTATAGGCCCAAGACCTAATTTTACATGGTATCAGAGCA AAAGCAGGACCCATTTCACCCAATGTTGAGCCCTCAAATTAAAATTTTCCGCACAAGATGTCCA GCCCTAGGCGTGAGGTGAGGTGTTGAAGTATGAAGAAGTATCACATTGGTGGTCTCCTTATAAA GCTAAGACAATCCTCTTCGTTTTGAGCTAGCTTTTAGGGGGTGAGTTAGGTTCAAGATTGCAAG ACCTAATTTTACAGTTTGCAAGGAGAAGGTTGATTGTGGATATGCCAATGAAAAAGGATTTTAG AGTTTTAGCTCACCGTATGTGCGATAAATTGCTTAAGTGGCTTTGTCTTGAATCTCTTTACTAA TTTAATCTTTTTATGATTGTTTTCTTGTAGATTAAGGTCTTATCAGAGTAGTTAGACTTTGTGG TACACTTAAGGTTGAAATTGAGGAATTAAAGCTAAGACCCTCTTTTCCTTGTCATGACATGATC TTATGATCTTTCTTTCGGTATTTTCCCCTTGTTCATGAGCTTATGGATTTCATGTTCCAAATTA TACTATTGAGTACTCTATGTGAAAATTCTTTCATGTCAAATTATACTATTTTTTATTTCATTTT TATAACTGAGAAATCCGTGTTGACCCGCCCTTTGGACCAAACACAGCCATCTAAACTACGTGGA TAATGGGCCCGCCCCTCTACCCTTCTCCACTTAAATACTGAGCTTTGCTTTGCATGGAGTGGGG CTTGAACCTGCGACCTAAACCTCAAATCCTCCACCTTTTGTCACTCAAGCTAGGTCTTGGGGGC ATGTCAAACTATACTATTAGCCTTGAATAATTTTAGCTTCCTATTATCGTTTTCTTGTAGATTA AGGTCTTATCTGAGTAGTCGGTCTTTGTGGCCCGCCCGTTCACCCTTTTCATGACATGATCTTT CTTTCGATACATTCCCCCTTGATCTTTCTTAGTAGTTGTATTCATTGCCTTGTGTCTACCATAC CTTCATGCCGAGTTCATTAGCTCCTCATGGATATGTCTAATGTCATACATATCAAAATTGACAC ATTTCTACCTAAAAGTTATGTCTAAGAACAAGGAAATGCTTTGTAAGCCGAAGGCACGAAATAG TAAGTGCTGTCCATGTGCACTCAACTGAACACCAACTGAACTCTTGACCTTTCTTATAAATGAT CATAAAGATGAGCCCAAATACAAAATGTGCAAGAAGCCAGAGTCTTCATCTTCATTACAAGAAT GTTTTAATGCATAAGATAGACAATGTCACCTGTGCAAGTGTGTTTAAATATAATCATTTGTAAA ATGTAAGTATGCTAATAGATCTGCAAAGGTACCTGATATGCCAAAGTATATGCATTATGTACCC TTCTCTTCTCAAGTTCTTCCATTATTAAGTCCACACATTCCTCCATCTCAGCCTTGTATGGATC ACCTGCTTCCTCTACATATGCAAGTGGTACACCATGAGCACTGAAGAATATCATCACCTGTGTA TATGAAGCTAGTTAATGCAGGAGACAAATTAGAGAGATTTTTCTACTTCTTGGGAAGACCCTGC TTTTATTTTCATTATAAAATATCTGAAAATTTTTCATAAATATGAAATGTAGAGGAGTAGAGGC AGGAACAGAACAGTGTCAGATCTGAATAAAAGAAATCTTTGCTCCAGAGTGCTGTAGTTTTCCT TTGTTTTTGATCCTTAATATCTTCTACTGTACAGAGATCTTTCCATGGCTCTGTATTTCTACCC TAACCAACTCGATAGAGTTTCCAGAGAAGGTCTCCAAGCATAAGACTTGATGGACAATAATACA CTAAATCAAGAGTATCACAACATTCATGACAAGAATCTTTTCTCATTTACTTTTTTGAAACTGG TAAAATTAAATCTTTAAGCATTTATCTTTATTAAAAAAAAAATCTTACAGCATTTATTACAGAA GAAAGCAAAACTGAGAAGGCATATACTTTTGCGAGAATTTTCTAGTTTAAGTAATGAAAACAAA AATAAAAATGCACAACTACTTTATGTGCCTCAAGTATAATACTATCAGGAAGATGAGACCTTAT TAGGAAAAAGAACTTTTCACGAGGTAAGTATAGCATGAGACATCCAAGAATAGAGACAATACTA CCTCCTCCGGACGTTCAAACATGTTCAACTCTTTTTCCATCAAATCTGCCATGGCTTTGATATA TCCTTCCCGTTGATACCATGAGGGTATTACTGTGTGTTGCATGTTAACAAGATACTCATCCTCC CTGATGTTAATACTCATTGCTCCATATATCAGTTTGACAATCGAAAATGGAATGTATTTTCTGA ACAGGAACATAGGGTATGTTTATTACCTAAATATACTCTCTAATAGGCGAAGGCTTGAACCACT CGTAGATATTGAAAACTGTGGATAAAGAGGGAGAACAACAAGCTTTGTGATTCCATCCCTTTTA AT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.808346795

Conservation Information
Conserved circRNAs	NA
PMCS	0.808346795

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							22693035-22688258(-)
22688298-22693161(-)
						
						Potential amino acid sequence
						
							MQHTVIPSWYQREGYIKAMADLMEKELNMFERPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEEC
VDLIMEELEKRRVHNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIET
LEEIDVEYKELALESGIQNWARVPALGVEPTFISDLADAVIESLPYVGAMAVSNLEARQIKRDG
ITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMADLMEKEL
NMFERPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRRVHNAYTLAYQSRVGP
VEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIQNWARVPALG
VEPTFISDLADAVIESLPYVGAMAVSNLEARQIKRDGITKLVVLPLYPQFSISTSGSSLRLLES
IFREDEYLVNMQHTVIPSWYQREGYIKAMADLMEKELNMFERPEEVMIFFSAHGVPLAYVEEAG
DPYKAEMEECVDLIMEELEKRRVHNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVP
ISFVSEHIETLEEIDVEYKELALESGIQNWARVPALGVEPTFISDLADAVIESLPYVGAMAVSN
LEARQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIK
AMADLMEKELNMFERPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRRVHNAY
TLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGI
QNWARVPALGVEPTFISDLADAVIESLPYVGAMAVSNLEARQ(-)
MLEQWQSQILKLARLKGMESQSLLFSLFIHSFQYLRVVQAFAY*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	22693035-22688258(-) 22688298-22693161(-)
Potential amino acid sequence	MQHTVIPSWYQREGYIKAMADLMEKELNMFERPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEEC VDLIMEELEKRRVHNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIET LEEIDVEYKELALESGIQNWARVPALGVEPTFISDLADAVIESLPYVGAMAVSNLEARQIKRDG ITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMADLMEKEL NMFERPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRRVHNAYTLAYQSRVGP VEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIQNWARVPALG VEPTFISDLADAVIESLPYVGAMAVSNLEARQIKRDGITKLVVLPLYPQFSISTSGSSLRLLES IFREDEYLVNMQHTVIPSWYQREGYIKAMADLMEKELNMFERPEEVMIFFSAHGVPLAYVEEAG DPYKAEMEECVDLIMEELEKRRVHNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVP ISFVSEHIETLEEIDVEYKELALESGIQNWARVPALGVEPTFISDLADAVIESLPYVGAMAVSN LEARQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIK AMADLMEKELNMFERPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRRVHNAY TLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGI QNWARVPALGVEPTFISDLADAVIESLPYVGAMAVSNLEARQ(-) MLEQWQSQILKLARLKGMESQSLLFSLFIHSFQYLRVVQAFAY*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016; Tan et al., 2017; Wang et al., 2018b

circRNA

Detail information of Solyc05g018650.2_circ_g.3

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