Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Os09g0249600_circ_ig.1 |
ID in PlantcircBase | osa_circ_038553 |
Alias | NA |
Organism | Oryza sativa |
Position | chr9: 3754561-3754715 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ig-circRNA |
Identification method | circRNA_finder |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os09g0249000_circ_ag.1 Os09g0249700_circ_g.1 Os09g0249700_circ_g.2 Os09g0249700_circ_g.3 Os09g0249700_circ_g.4 Os09g0249700_circ_g.5 Os09g0249700_circ_g.6 Os09g0249700_circ_g.7 Os09g0249700_circ_g.8 Os09g0249700_circ_g.9 Os09g0249700_circ_g.10 Os09g0249700_circ_g.11 Os09g0249700_circ_g.12 Os09g0249700_circ_g.13 Os09g0249700_circ_g.14 Os09g0249700_circ_g.15 Os09g0249700_circ_g.16 |
Support reads | 2 |
Tissues | pistil |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.133333602 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |