Plant Circular RNA Database

Detail information of Os11g0170400_circ_g.5

			
						 General Information
					
						CircRNA Name
						Os11g0170400_circ_g.5
					
						ID in PlantcircBase
						osa_circ_008609
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr11: 3426241-3428886  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer, KNIFE, PcircRNA_finder
					
						Parent gene
						
							Os11g0170400						
					
						Parent gene annotation
						
							Conserved hypothetical protein. (Os11t0170400-01);Conserved hypo
thetical protein. (Os11t0170400-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os11g0170400_circ_g.1 Os11g0170400_circ_g.2 Os11g0170400_circ_g.3 Os11g0170400_circ_g.4 Os11g0170400_circ_g.6 Os11g0170400_circ_g.7 						
					
						Support reads
						9
					
						Tissues
						root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os11t0170400-02:3
Os11t0170400-01:6

General Information
CircRNA Name	Os11g0170400_circ_g.5
ID in PlantcircBase	osa_circ_008609
Alias	NA
Organism	Oryza sativa
Position	chr11: 3426241-3428886 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	CIRCexplorer, KNIFE, PcircRNA_finder
Parent gene	Os11g0170400
Parent gene annotation	Conserved hypothetical protein. (Os11t0170400-01);Conserved hypo thetical protein. (Os11t0170400-02)
Parent gene strand	+
Alternative splicing	Os11g0170400_circ_g.1 Os11g0170400_circ_g.2 Os11g0170400_circ_g.3 Os11g0170400_circ_g.4 Os11g0170400_circ_g.6 Os11g0170400_circ_g.7
Support reads	9
Tissues	root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os11t0170400-02:3 Os11t0170400-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGTTGGTCGCAGATTACAGAGAGGACGACTTTTATGCTGCGCATCTACAGTCATACTGAGCAAA
TCCTCTCTTAAGCAGGGCTGCGATATTTAGATTATGtggctgcaagcctgcaagatggagctga
gttgggaggctgagcaagcagcaacaggaggaatcaaggaacaagggggaaaatgtgagggagg
aggaaact

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2488
Transcript exons: 3426241-3426445,3426537-3426600,3426668-3428886
TGGCTGCAAGCCTGCAAGATGGAGCTGAGTTGGGAGGCTGAGCAAGCAGCAACAGGAGGAATCA
AGGAACAAGGGGGAAAATGTGAGGGAGGAGGAAACTGGGATACCTAAGTAATTTGCTAATGCGT
TTTTAGGCTACCTATTCCAATCCCTCATCGTATGGTGTACATTCAGATTCAGATATGATTGGCT
TGATATTTAGGAGAGGCCAAATCAAGGAATGCAAATAACTATAGAGTTGTACAGGGTTCCTTAA
GCCCTCTATTAAGTTCAACCATAACTCGAGCTGTCAACTTGCAAGGGTTTTCATCCTGTCTATA
TGGTCAAATATTGCCACTCTGTAACTAAATGTTGTAAGGTATGTGATCCTCAATCCAATGTTTG
CGTATTAATTTACTTATTGTATCAAGCTTTTCTATTAACAGAGTTGTGGTTTCTTGTTTTTCTT
GTTCTGTATATATTGCAATTCAATATTTTTATATCAGCTACTGGATGACAATGATTTTCGAAAA
CTGACATGGCACCTCACTTGGTCGCATTAACGAATCTAGAGTCATGTTCTACTTAATTTCAGCG
ATATGTGCAGTTCATTATGATTTTCTCTAATATATGATGTGTCTCAGCCTGTGAGATAGTTGCC
AGACACTTATAATCGGTAGGTCATCCAAGATACAAGTACAAAGCAAGAGATATTCATCAAAGGG
TACACAACAATTTTGTAGGTAAGTGGCTTTCAGTTTTGTTGTAAAAAAAACTTATGGGAAATTT
TAGATGTGCTACTTTATTCGCTGAAGTGTTATCTGTATAGATTAGTTTCACCTCATTATACACG
AGTTCATGCAGGACCAACACAAATTATTGCCATGCATTCTCTATATTCTTCACTGTGTATGATA
CATAACGATATAAGTGATATGATGGCATTAAACTATTGAGAACTGCGGTTTGGTATTATGTGCC
AGATTACCCATTTCAAAATTATACAAATGAAACATCCTATTGCAATAGCTATTGTTCGGCTTTA
AATATCTGAAGAGGATTTTACCAAATTGTTCTTTCGTCCAGGACAGCCATGGTATCTGATTATT
CTCAATTGTTCTTGATCTTCAGACAAGTGAAAAATCGTTGGTCAGTTTGAAGGAACAAATTTCC
TCTTGCAAAATACCTATTCCTGTCTAGAGGGCCAATGCACTATCCTCAGCTCAGGAAAACATAA
TGGATGAAGCTGTCAATTGTTCCACTGAGAAACAAACACAAGATAAGATAATAGTGAACATTCA
TACTGCATTGATCTCTGCTCTGAGTTCTGAGCAAGAGGTAAACCTTATGAACTTTCTTATTTGA
TTTATTTCTGAGATGTGCTTATTAAATTTTTGCATGGTGGCATTAGTAATGTTATATGGACTAT
CAGGTCAATCTTGACGCTTCTTGAATTGAATCAATGCAAAAAAAACACGATAATTATTTTTGCC
CTTTGTATCATGGAGAATTAGTAGACATTTTATGTTCAGATATTATAGTCATATGTGTTTACTT
AAAAGCCGTGGGATTGGTTGAAGGTTAGGGCCGCCACGTCAGCAAATTTTACAAAAAAGACCCT
GTGTTTTTGTTAATTACATACTGGTTCCCACCAACATCGTCCGTTCGATCTCGCGGTAGAGCCG
ATCTAACCGTCCACGTGTCCACTGTGGCGGCCCTTTCTCAGCCGTGGGATCGTCGAATTGGCAA
TCAACGGCATAGATTTCGTCCGGCCGGACCAAACCCTAGCCCCATCGCCCGTCTCGGACGCAGC
CTGGCGCACGCCTCTCCCTTCTACGCGACTACGCCGCCACGCCGTCGCCTCTCGCCGCCGCCTC
GCCCTTCTTCCTTTGCGCGCGCCGTCGCCGCTGCATCCTCGCCCTCCTCCGGCCATCCTCGCCC
TAGCCGCACTACCAAGCCCCGCGTGTGTGACCTCGCCTGTCGCCGCCGCCGCTCGACTGCCGCC
TCCGCCGCCGATCGCCTGCCGCCGCCGCCGCCGCCGCGGCTGCTCGCCTGCCGCCGTGCCGCTC
CCCTCGCTCCGCACACCAGGCCACCTTCTCCCCTCTTCTCCCCTCTCATCTCCAGGCCACCCAC
CGCCTCCCTCTTCCTCTCCCTATCCTCGGTGAGCTACAGATCCGGTTCGGGGGTCATCGGAATC
GATGGTCTCGGCCATTGGTCTCCTCGTTGGTGAATCATTTTGATACCCCTTTCAGCCACAATTG
TTTTGTGCATACATTTAGCACAAAATCCACAAGGTAAGGCAATGGTTTTGACTCGCCATTGAGC
ATTTCCATTGCGTTTGCTGGTGTTTTTACATGATCCCACATCTTGCCTTAGGTTCTGTGGAGAA
ATTGATGGGCTAGGATGAGGTGTTGGTCGCAGATTACAGAGAGGACGACTTTTATGCTGCGCAT
CTACAGTCATACTGAGCAAATCCTCTCTTAAGCAGGGCTGCGATATTTAGATTATG
Transcript length: 797
Transcript exons: 3426241-3426445,3426537-3426600,3426668-3426756,3427022-
3427120,3427509-3427715,3428754-3428886
TGGCTGCAAGCCTGCAAGATGGAGCTGAGTTGGGAGGCTGAGCAAGCAGCAACAGGAGGAATCA
AGGAACAAGGGGGAAAATGTGAGGGAGGAGGAAACTGGGATACCTAAGTAATTTGCTAATGCGT
TTTTAGGCTACCTATTCCAATCCCTCATCGTATGGTGTACATTCAGATTCAGATATGATTGGCT
TGATATTTAGGAGAGGCCAAATCAAGGAATGCAAATAACTATAGAGTTGTACAGGGTTCCTTAA
GCCCTCTATTAAGTTCAACCATAACTCGAGCTGTCAACTTGCAAGGGTTTTCATCCTGTCTATA
TGGTCAAATATTGCCACTCTGTAACTAAATGTTGTAAGCCTGTGAGATAGTTGCCAGACACTTA
TAATCGGTAGGTCATCCAAGATACAAGTACAAAGCAAGAGATATTCATCAAAGGGTACACAACA
ATTTTGTAGACAAGTGAAAAATCGTTGGTCAGTTTGAAGGAACAAATTTCCTCTTGCAAAATAC
CTATTCCTGTCTAGAGGGCCAATGCACTATCCTCAGCTCAGGAAAACATAATGGATGAAGCTGT
CAATTGTTCCACTGAGAAACAAACACAAGATAAGATAATAGTGAACATTCATACTGCATTGATC
TCTGCTCTGAGTTCTGAGCAAGAGGTTCTGTGGAGAAATTGATGGGCTAGGATGAGGTGTTGGT
CGCAGATTACAGAGAGGACGACTTTTATGCTGCGCATCTACAGTCATACTGAGCAAATCCTCTC
TTAAGCAGGGCTGCGATATTTAGATTATG
						
					

						Genomic sequence
						
							TGGCTGCAAGCCTGCAAGATGGAGCTGAGTTGGGAGGCTGAGCAAGCAGCAACAGGAGGAATCA
AGGAACAAGGGGGAAAATGTGAGGGAGGAGGAAACTGGGATACCTAAGTAATTTGCTAATGCGT
TTTTAGGCTACCTATTCCAATCCCTCATCGTATGGTGTACATTCAGATTCAGATATGATTGGCT
TGATATTTAGGAGGTAGGTTCGTGCTTTGTCCTAATTTCAGTTATTTGTTTTTATTTTCACAAA
ATTGTTCAATTTGGATATACCTAACTTTTTCAGTCTTTAGAGGCCAAATCAAGGAATGCAAATA
ACTATAGAGTTGTACAGGGTTCCTTAAGCCCTCTATTAAGGTAAAGAACATGGAAATCTACCAA
GTAGAATAGAAGTTATCACAATCTGAACTCTGTTGTATTGCAGTTCAACCATAACTCGAGCTGT
CAACTTGCAAGGGTTTTCATCCTGTCTATATGGTCAAATATTGCCACTCTGTAACTAAATGTTG
TAAGGTATGTGATCCTCAATCCAATGTTTGCGTATTAATTTACTTATTGTATCAAGCTTTTCTA
TTAACAGAGTTGTGGTTTCTTGTTTTTCTTGTTCTGTATATATTGCAATTCAATATTTTTATAT
CAGCTACTGGATGACAATGATTTTCGAAAACTGACATGGCACCTCACTTGGTCGCATTAACGAA
TCTAGAGTCATGTTCTACTTAATTTCAGCGATATGTGCAGTTCATTATGATTTTCTCTAATATA
TGATGTGTCTCAGCCTGTGAGATAGTTGCCAGACACTTATAATCGGTAGGTCATCCAAGATACA
AGTACAAAGCAAGAGATATTCATCAAAGGGTACACAACAATTTTGTAGGTAAGTGGCTTTCAGT
TTTGTTGTAAAAAAAACTTATGGGAAATTTTAGATGTGCTACTTTATTCGCTGAAGTGTTATCT
GTATAGATTAGTTTCACCTCATTATACACGAGTTCATGCAGGACCAACACAAATTATTGCCATG
CATTCTCTATATTCTTCACTGTGTATGATACATAACGATATAAGTGATATGATGGCATTAAACT
ATTGAGAACTGCGGTTTGGTATTATGTGCCAGATTACCCATTTCAAAATTATACAAATGAAACA
TCCTATTGCAATAGCTATTGTTCGGCTTTAAATATCTGAAGAGGATTTTACCAAATTGTTCTTT
CGTCCAGGACAGCCATGGTATCTGATTATTCTCAATTGTTCTTGATCTTCAGACAAGTGAAAAA
TCGTTGGTCAGTTTGAAGGAACAAATTTCCTCTTGCAAAATACCTATTCCTGTCTAGAGGGCCA
ATGCACTATCCTCAGCTCAGGAAAACATAATGGATGAAGCTGTCAATTGTTCCACTGAGAAACA
AACACAAGATAAGATAATAGTGAACATTCATACTGCATTGATCTCTGCTCTGAGTTCTGAGCAA
GAGGTAAACCTTATGAACTTTCTTATTTGATTTATTTCTGAGATGTGCTTATTAAATTTTTGCA
TGGTGGCATTAGTAATGTTATATGGACTATCAGGTCAATCTTGACGCTTCTTGAATTGAATCAA
TGCAAAAAAAACACGATAATTATTTTTGCCCTTTGTATCATGGAGAATTAGTAGACATTTTATG
TTCAGATATTATAGTCATATGTGTTTACTTAAAAGCCGTGGGATTGGTTGAAGGTTAGGGCCGC
CACGTCAGCAAATTTTACAAAAAAGACCCTGTGTTTTTGTTAATTACATACTGGTTCCCACCAA
CATCGTCCGTTCGATCTCGCGGTAGAGCCGATCTAACCGTCCACGTGTCCACTGTGGCGGCCCT
TTCTCAGCCGTGGGATCGTCGAATTGGCAATCAACGGCATAGATTTCGTCCGGCCGGACCAAAC
CCTAGCCCCATCGCCCGTCTCGGACGCAGCCTGGCGCACGCCTCTCCCTTCTACGCGACTACGC
CGCCACGCCGTCGCCTCTCGCCGCCGCCTCGCCCTTCTTCCTTTGCGCGCGCCGTCGCCGCTGC
ATCCTCGCCCTCCTCCGGCCATCCTCGCCCTAGCCGCACTACCAAGCCCCGCGTGTGTGACCTC
GCCTGTCGCCGCCGCCGCTCGACTGCCGCCTCCGCCGCCGATCGCCTGCCGCCGCCGCCGCCGC
CGCGGCTGCTCGCCTGCCGCCGTGCCGCTCCCCTCGCTCCGCACACCAGGCCACCTTCTCCCCT
CTTCTCCCCTCTCATCTCCAGGCCACCCACCGCCTCCCTCTTCCTCTCCCTATCCTCGGTGAGC
TACAGATCCGGTTCGGGGGTCATCGGAATCGATGGTCTCGGCCATTGGTCTCCTCGTTGGTGAA
TCATTTTGATACCCCTTTCAGCCACAATTGTTTTGTGCATACATTTAGCACAAAATCCACAAGG
TAAGGCAATGGTTTTGACTCGCCATTGAGCATTTCCATTGCGTTTGCTGGTGTTTTTACATGAT
CCCACATCTTGCCTTAGGTTCTGTGGAGAAATTGATGGGCTAGGATGAGGTGTTGGTCGCAGAT
TACAGAGAGGACGACTTTTATGCTGCGCATCTACAGTCATACTGAGCAAATCCTCTCTTAAGCA
GGGCTGCGATATTTAGATTATG
						
					

			
		

Sequences
Splice junction sequence	TGTTGGTCGCAGATTACAGAGAGGACGACTTTTATGCTGCGCATCTACAGTCATACTGAGCAAA TCCTCTCTTAAGCAGGGCTGCGATATTTAGATTATGtggctgcaagcctgcaagatggagctga gttgggaggctgagcaagcagcaacaggaggaatcaaggaacaagggggaaaatgtgagggagg aggaaact
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2488 Transcript exons: 3426241-3426445,3426537-3426600,3426668-3428886 TGGCTGCAAGCCTGCAAGATGGAGCTGAGTTGGGAGGCTGAGCAAGCAGCAACAGGAGGAATCA AGGAACAAGGGGGAAAATGTGAGGGAGGAGGAAACTGGGATACCTAAGTAATTTGCTAATGCGT TTTTAGGCTACCTATTCCAATCCCTCATCGTATGGTGTACATTCAGATTCAGATATGATTGGCT TGATATTTAGGAGAGGCCAAATCAAGGAATGCAAATAACTATAGAGTTGTACAGGGTTCCTTAA GCCCTCTATTAAGTTCAACCATAACTCGAGCTGTCAACTTGCAAGGGTTTTCATCCTGTCTATA TGGTCAAATATTGCCACTCTGTAACTAAATGTTGTAAGGTATGTGATCCTCAATCCAATGTTTG CGTATTAATTTACTTATTGTATCAAGCTTTTCTATTAACAGAGTTGTGGTTTCTTGTTTTTCTT GTTCTGTATATATTGCAATTCAATATTTTTATATCAGCTACTGGATGACAATGATTTTCGAAAA CTGACATGGCACCTCACTTGGTCGCATTAACGAATCTAGAGTCATGTTCTACTTAATTTCAGCG ATATGTGCAGTTCATTATGATTTTCTCTAATATATGATGTGTCTCAGCCTGTGAGATAGTTGCC AGACACTTATAATCGGTAGGTCATCCAAGATACAAGTACAAAGCAAGAGATATTCATCAAAGGG TACACAACAATTTTGTAGGTAAGTGGCTTTCAGTTTTGTTGTAAAAAAAACTTATGGGAAATTT TAGATGTGCTACTTTATTCGCTGAAGTGTTATCTGTATAGATTAGTTTCACCTCATTATACACG AGTTCATGCAGGACCAACACAAATTATTGCCATGCATTCTCTATATTCTTCACTGTGTATGATA CATAACGATATAAGTGATATGATGGCATTAAACTATTGAGAACTGCGGTTTGGTATTATGTGCC AGATTACCCATTTCAAAATTATACAAATGAAACATCCTATTGCAATAGCTATTGTTCGGCTTTA AATATCTGAAGAGGATTTTACCAAATTGTTCTTTCGTCCAGGACAGCCATGGTATCTGATTATT CTCAATTGTTCTTGATCTTCAGACAAGTGAAAAATCGTTGGTCAGTTTGAAGGAACAAATTTCC TCTTGCAAAATACCTATTCCTGTCTAGAGGGCCAATGCACTATCCTCAGCTCAGGAAAACATAA TGGATGAAGCTGTCAATTGTTCCACTGAGAAACAAACACAAGATAAGATAATAGTGAACATTCA TACTGCATTGATCTCTGCTCTGAGTTCTGAGCAAGAGGTAAACCTTATGAACTTTCTTATTTGA TTTATTTCTGAGATGTGCTTATTAAATTTTTGCATGGTGGCATTAGTAATGTTATATGGACTAT CAGGTCAATCTTGACGCTTCTTGAATTGAATCAATGCAAAAAAAACACGATAATTATTTTTGCC CTTTGTATCATGGAGAATTAGTAGACATTTTATGTTCAGATATTATAGTCATATGTGTTTACTT AAAAGCCGTGGGATTGGTTGAAGGTTAGGGCCGCCACGTCAGCAAATTTTACAAAAAAGACCCT GTGTTTTTGTTAATTACATACTGGTTCCCACCAACATCGTCCGTTCGATCTCGCGGTAGAGCCG ATCTAACCGTCCACGTGTCCACTGTGGCGGCCCTTTCTCAGCCGTGGGATCGTCGAATTGGCAA TCAACGGCATAGATTTCGTCCGGCCGGACCAAACCCTAGCCCCATCGCCCGTCTCGGACGCAGC CTGGCGCACGCCTCTCCCTTCTACGCGACTACGCCGCCACGCCGTCGCCTCTCGCCGCCGCCTC GCCCTTCTTCCTTTGCGCGCGCCGTCGCCGCTGCATCCTCGCCCTCCTCCGGCCATCCTCGCCC TAGCCGCACTACCAAGCCCCGCGTGTGTGACCTCGCCTGTCGCCGCCGCCGCTCGACTGCCGCC TCCGCCGCCGATCGCCTGCCGCCGCCGCCGCCGCCGCGGCTGCTCGCCTGCCGCCGTGCCGCTC CCCTCGCTCCGCACACCAGGCCACCTTCTCCCCTCTTCTCCCCTCTCATCTCCAGGCCACCCAC CGCCTCCCTCTTCCTCTCCCTATCCTCGGTGAGCTACAGATCCGGTTCGGGGGTCATCGGAATC GATGGTCTCGGCCATTGGTCTCCTCGTTGGTGAATCATTTTGATACCCCTTTCAGCCACAATTG TTTTGTGCATACATTTAGCACAAAATCCACAAGGTAAGGCAATGGTTTTGACTCGCCATTGAGC ATTTCCATTGCGTTTGCTGGTGTTTTTACATGATCCCACATCTTGCCTTAGGTTCTGTGGAGAA ATTGATGGGCTAGGATGAGGTGTTGGTCGCAGATTACAGAGAGGACGACTTTTATGCTGCGCAT CTACAGTCATACTGAGCAAATCCTCTCTTAAGCAGGGCTGCGATATTTAGATTATG Transcript length: 797 Transcript exons: 3426241-3426445,3426537-3426600,3426668-3426756,3427022- 3427120,3427509-3427715,3428754-3428886 TGGCTGCAAGCCTGCAAGATGGAGCTGAGTTGGGAGGCTGAGCAAGCAGCAACAGGAGGAATCA AGGAACAAGGGGGAAAATGTGAGGGAGGAGGAAACTGGGATACCTAAGTAATTTGCTAATGCGT TTTTAGGCTACCTATTCCAATCCCTCATCGTATGGTGTACATTCAGATTCAGATATGATTGGCT TGATATTTAGGAGAGGCCAAATCAAGGAATGCAAATAACTATAGAGTTGTACAGGGTTCCTTAA GCCCTCTATTAAGTTCAACCATAACTCGAGCTGTCAACTTGCAAGGGTTTTCATCCTGTCTATA TGGTCAAATATTGCCACTCTGTAACTAAATGTTGTAAGCCTGTGAGATAGTTGCCAGACACTTA TAATCGGTAGGTCATCCAAGATACAAGTACAAAGCAAGAGATATTCATCAAAGGGTACACAACA ATTTTGTAGACAAGTGAAAAATCGTTGGTCAGTTTGAAGGAACAAATTTCCTCTTGCAAAATAC CTATTCCTGTCTAGAGGGCCAATGCACTATCCTCAGCTCAGGAAAACATAATGGATGAAGCTGT CAATTGTTCCACTGAGAAACAAACACAAGATAAGATAATAGTGAACATTCATACTGCATTGATC TCTGCTCTGAGTTCTGAGCAAGAGGTTCTGTGGAGAAATTGATGGGCTAGGATGAGGTGTTGGT CGCAGATTACAGAGAGGACGACTTTTATGCTGCGCATCTACAGTCATACTGAGCAAATCCTCTC TTAAGCAGGGCTGCGATATTTAGATTATG
Genomic sequence	TGGCTGCAAGCCTGCAAGATGGAGCTGAGTTGGGAGGCTGAGCAAGCAGCAACAGGAGGAATCA AGGAACAAGGGGGAAAATGTGAGGGAGGAGGAAACTGGGATACCTAAGTAATTTGCTAATGCGT TTTTAGGCTACCTATTCCAATCCCTCATCGTATGGTGTACATTCAGATTCAGATATGATTGGCT TGATATTTAGGAGGTAGGTTCGTGCTTTGTCCTAATTTCAGTTATTTGTTTTTATTTTCACAAA ATTGTTCAATTTGGATATACCTAACTTTTTCAGTCTTTAGAGGCCAAATCAAGGAATGCAAATA ACTATAGAGTTGTACAGGGTTCCTTAAGCCCTCTATTAAGGTAAAGAACATGGAAATCTACCAA GTAGAATAGAAGTTATCACAATCTGAACTCTGTTGTATTGCAGTTCAACCATAACTCGAGCTGT CAACTTGCAAGGGTTTTCATCCTGTCTATATGGTCAAATATTGCCACTCTGTAACTAAATGTTG TAAGGTATGTGATCCTCAATCCAATGTTTGCGTATTAATTTACTTATTGTATCAAGCTTTTCTA TTAACAGAGTTGTGGTTTCTTGTTTTTCTTGTTCTGTATATATTGCAATTCAATATTTTTATAT CAGCTACTGGATGACAATGATTTTCGAAAACTGACATGGCACCTCACTTGGTCGCATTAACGAA TCTAGAGTCATGTTCTACTTAATTTCAGCGATATGTGCAGTTCATTATGATTTTCTCTAATATA TGATGTGTCTCAGCCTGTGAGATAGTTGCCAGACACTTATAATCGGTAGGTCATCCAAGATACA AGTACAAAGCAAGAGATATTCATCAAAGGGTACACAACAATTTTGTAGGTAAGTGGCTTTCAGT TTTGTTGTAAAAAAAACTTATGGGAAATTTTAGATGTGCTACTTTATTCGCTGAAGTGTTATCT GTATAGATTAGTTTCACCTCATTATACACGAGTTCATGCAGGACCAACACAAATTATTGCCATG CATTCTCTATATTCTTCACTGTGTATGATACATAACGATATAAGTGATATGATGGCATTAAACT ATTGAGAACTGCGGTTTGGTATTATGTGCCAGATTACCCATTTCAAAATTATACAAATGAAACA TCCTATTGCAATAGCTATTGTTCGGCTTTAAATATCTGAAGAGGATTTTACCAAATTGTTCTTT CGTCCAGGACAGCCATGGTATCTGATTATTCTCAATTGTTCTTGATCTTCAGACAAGTGAAAAA TCGTTGGTCAGTTTGAAGGAACAAATTTCCTCTTGCAAAATACCTATTCCTGTCTAGAGGGCCA ATGCACTATCCTCAGCTCAGGAAAACATAATGGATGAAGCTGTCAATTGTTCCACTGAGAAACA AACACAAGATAAGATAATAGTGAACATTCATACTGCATTGATCTCTGCTCTGAGTTCTGAGCAA GAGGTAAACCTTATGAACTTTCTTATTTGATTTATTTCTGAGATGTGCTTATTAAATTTTTGCA TGGTGGCATTAGTAATGTTATATGGACTATCAGGTCAATCTTGACGCTTCTTGAATTGAATCAA TGCAAAAAAAACACGATAATTATTTTTGCCCTTTGTATCATGGAGAATTAGTAGACATTTTATG TTCAGATATTATAGTCATATGTGTTTACTTAAAAGCCGTGGGATTGGTTGAAGGTTAGGGCCGC CACGTCAGCAAATTTTACAAAAAAGACCCTGTGTTTTTGTTAATTACATACTGGTTCCCACCAA CATCGTCCGTTCGATCTCGCGGTAGAGCCGATCTAACCGTCCACGTGTCCACTGTGGCGGCCCT TTCTCAGCCGTGGGATCGTCGAATTGGCAATCAACGGCATAGATTTCGTCCGGCCGGACCAAAC CCTAGCCCCATCGCCCGTCTCGGACGCAGCCTGGCGCACGCCTCTCCCTTCTACGCGACTACGC CGCCACGCCGTCGCCTCTCGCCGCCGCCTCGCCCTTCTTCCTTTGCGCGCGCCGTCGCCGCTGC ATCCTCGCCCTCCTCCGGCCATCCTCGCCCTAGCCGCACTACCAAGCCCCGCGTGTGTGACCTC GCCTGTCGCCGCCGCCGCTCGACTGCCGCCTCCGCCGCCGATCGCCTGCCGCCGCCGCCGCCGC CGCGGCTGCTCGCCTGCCGCCGTGCCGCTCCCCTCGCTCCGCACACCAGGCCACCTTCTCCCCT CTTCTCCCCTCTCATCTCCAGGCCACCCACCGCCTCCCTCTTCCTCTCCCTATCCTCGGTGAGC TACAGATCCGGTTCGGGGGTCATCGGAATCGATGGTCTCGGCCATTGGTCTCCTCGTTGGTGAA TCATTTTGATACCCCTTTCAGCCACAATTGTTTTGTGCATACATTTAGCACAAAATCCACAAGG TAAGGCAATGGTTTTGACTCGCCATTGAGCATTTCCATTGCGTTTGCTGGTGTTTTTACATGAT CCCACATCTTGCCTTAGGTTCTGTGGAGAAATTGATGGGCTAGGATGAGGTGTTGGTCGCAGAT TACAGAGAGGACGACTTTTATGCTGCGCATCTACAGTCATACTGAGCAAATCCTCTCTTAAGCA GGGCTGCGATATTTAGATTATG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.55204429

Conservation Information
Conserved circRNAs	NA
PMCS	0.55204429

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							3428885-3426348(+)
						
						Potential amino acid sequence
						
							MWLQACKMELSWEAEQAATGGIKEQGGKCEGGGNWDT*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	3428885-3426348(+)
Potential amino acid sequence	MWLQACKMELSWEAEQAATGGIKEQGGKCEGGGNWDT*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os11g0170400_circ_g.5

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