Splice junction sequence |
GCTTTCTTCTTCATCTCTAATAATACATTTGATCTTCTTTTCGTTGTCTTTTAACTCGGGAAAT ACATCACCCATCAGTTGGACAAAAACATTTACAAGCctggcctccttgttcagcatagaaactt gtactttccagcacaagaccaaagtccccatcaccagtagctgtagtaatgtattctgagccag tatagata
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 562 Transcript exons: 18397162-18397284,18399218-18399319,18399553-18399648,18 399741-18399791,18401312-18401380,18401554-18401674 CTGGCCTCCTTGTTCAGCATAGAAACTTGTACTTTCCAGCACAAGACCAAAGTCCCCATCACCA GTAGCTGTAGTAATGTATTCTGAGCCAGTATAGATAGCCTTCACCACGCTTTCATGTTCCTTGG GCCACAGAAACTTTGGGCTATCGTCCGTGCTGGCAAGCCCCAGTTTGCGCAACTGCGCTGTAGC ATTCGCATCCATAGCAATAGAGTTCCCTCCAGACTTGTTACGAGCATTTCTAGCTTTTTGCCTC GCTTCTTCCATAGAAGCATTAAACCCCTTCTTATCAACAGTTAGCCCATAGTCGATTGCCATGA CCTCAGTCAAATCAATTGGATAACCATAAGTGTCCCAAAGAATAAATGCATCCTGTCCACTAAG TATAGTTCCACCATTATCCTTAACAGCGTCTGCAGCTTTCTTAAATTTTTCATAACCCTTTGCT AGAGTGTTCTCAAAGCTTTCTTCTTCATCTCTAATAATACATTTGATCTTCTTTTCGTTGTCTT TTAACTCGGGAAATACATCACCCATCAGTTGGACAAAAACATTTACAAGC
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Genomic sequence |
CTGGCCTCCTTGTTCAGCATAGAAACTTGTACTTTCCAGCACAAGACCAAAGTCCCCATCACCA GTAGCTGTAGTAATGTATTCTGAGCCAGTATAGATAGCCTTCACCACGCTTTCATGTTCCTAGA AAATATTAATGGTAAGATCAAGAAAACACAGTAAACATTGGCATAACCCTAATGGTTGATTACA AATATCGAAAGTGTGGGAAGCAACAGAAGTTGAATATAACTAATAAGGGCTTGTCTGAATCCAT TGGGATTCTGAGGATCCAGATAAAAAAAATCTACAAGCACTCAAACGGGGCAGATTATGGGTAG GATTCTAGAAATCCTATGCCAGATTCTAGAAATCTATGTATCAACCCAGATAACACACGGTAGT ACATGCGAAAACTCACGCTTTCCCTTACCCTTATCTTCCCCTGTCGACTGACATCCTGTGTCAT TCTCACCTATGTGGCTGCTCTTGCAGCCTCCGCCCGCCCCAGCCACAAGCGCCACCACTAGTAG GCAACTTGGCTCTAGTGGTTGGTGCTGCGGCGAAGTTGAGAAGCATGAACGAGCGGCCTCGAGC CTACTTTGGATGCAGCACGGAGCAGTGTACGCGACGGCTACAATGGCATGACAAGCACGCATGT TGGATCCCCGGGCGATCGGAGACGTGTATCTGATTGGTCACCGGAGCGGCTGTATTTGTGGCCA TGCGGGGCGGCGCCGTTGGCGGCAAGACACAAACAGGAAAGTGAATGCCCCAGTGGGTGAGGGA GTGGCACAGCACCGCCTACATGGGTGAGATCAAGAATGGTGCAGTTCAGATTTACTCGCTGGTA CGCACACTTCCTCTGTCGTCCTTCCTCTCTACAGATATGGGACCACCGCTTCACATTACGACAT TGGCGACAACATCCACAATGTACTATACGGCTTCCTCACGCCAGGGAGAGCGGACAAACGGGGA CTTGAGCTGGTGGTGGTGATGGCTGATCAATGGAGAGGCCTGGGAAGGGGCGTACATTGTGGAT CAAGATGCAGGAGTGATTGGATGCTGCAGGGGATATTTGGAGGACAAAAAGCAAACCTAGCACA GACCAGAGGTGGTGCGGGCAAGCGGCAATCAACAGGCACAGTGATGAAGATGAGATGCACTTAA CGTGGACCTAGGCACTTCATGCGTTCTTATGTTTTCCTTTTTTAACCACTCCGCTAATTGAACA CAATGTAGAGGGGTATTTTGGAGAAAAACTCTTTGAAATATCTAGAATCCATAACTAAAAACCA AGGACTCATACAGGTAGAGATTTTATTATTCAAAATCTGGATTCTAGAATCTGGATTCTAGAAT TCCCTAGGATACAAACAGGACCTAAGTATAAAAAAACTCAGCCGTTAGGGGAAAGACCACCCCC ATGGTATTATATTAAGAACAATCTCAATTGGAGCCCCAACCGTGAAAGGTCACGAAAGCTGGTC CCCCGTGCAACATGAGGGTCTACCCCCTATAAGCCAGATCTTTACTTGTTCTTTGAGCCCTCCC GGCCCCTACACGAGGATCCCCCTAGGTCAGTCCATCTCATGTGCACACAACTAAGGGAACCAGC GAGTGACATTTTTTAACCTCGGCCTGAAATTCGCTCCCACTGGAATTCAAACTCAAGACCTGAG AAAGTAAGAAGTGCTACTCAGACCACCTAACCAACTGGGATTCAAACAGGACCTAAGTATAAGT TGTAAGATAACAAAAAGTCTAACTTGTTAGAACTTAATGTGATTGTATATCAGGTTACGGCCAT ATCAGAGCAAGGGTCCACACAGTTGTTCTATAACAGAGGAAGACCTTAACTGACTTCGATTAAA GATAGGATAGAATTAGGTTTAATCTGTCCCAGAGACAGCAGAGTTCGAATTGGAGTCAGTTAGG TAGTTGTACCCGAGTTGGACGGCCTGTCATGTTGTAATCCTGATGGTGGTATTCGGCCCTATAT ATACTCAGCCCCCTCGGTCAGGGCGAACAGCTAAAACCTAGTGCCGTGTTTTCGTTTTCTTACA TAACTAACCTTGGGCCACAGAAACTTTGGGCTATCGTCCGTGCTGGCAAGCCCCAGTTTGCGCA ACTGCGCTGTAGCATTCGCATCCATAGCAATAGAGTTCCCTCCAGACTGCAAAAAGAAACATAT ATAATAAAAATTGAAGGGGTGAAAACAGTTACCATGAAATTCAAAGATAAAAAACAAAGAACAA ACATAACAGATTTCAATACCAGTAACATATAGATATTGGAAAATGTTATCAGCAAATATAGAAA CACAAACAGCAAGAATAATGGGATAACAAATGGCACCACAATAGACTCAGGATTAGCTTCTACA CTTAGCAGAAACGTAAAAATAACCTTGTTACGAGCATTTCTAGCTTTTTGCCTCGCTTCTTCCA TAGAAGCATTAAACCCCTTCTTATCAACAGTTAGCCCATAGTCGATTGCCATGACCTACACAAA GAAATCATAATAATGCATGGTAAACGTAAAAATGTTCCAGCAAATTAGCTGGCTAAAAGATAAA TAACAAATGTAAAACTAACCTCAGTCAAATCAATTGGATAACCATAAGTGTCCCAAAGAATAAA TGCATCCTGAAAGAATAAATGAACTATTTAAGTACATCAAAAAGTGAAGGCACCCCAAACTCAG AAACCATTTCATAGGGAGGAATGTCTAACCACTAGCCAGGTCCACTCATGCAGCACAACAGTTT TCGGTTGCCTAACAATCATGTGCCTGGTCCAAATGGTGCAAGCGCCCAAGCTTGGCCCAACAGG TCTACTGGATCCATAAATCCAATCAAATATGCTAATTATGTTGTAATCTAGATGAATGAGTACC TAAATCTTTTGTGTTGTACTCTGGATTGATAGGCTTTTACTGATGCTAATTATGCAATGTTGTT AAATTGTAAAAATAACTAGTCACGGTTAAAATTCCACTATTATTAATGAACAGAAGAAACCTAT GATGACCTAGCCAAATTCCAAAGAAGAAATAAAAAGGTTCAAACTAAGGGGTAACCACACCAAA CACCATCAATTGGGCCAAGGCAAGACCTGCACCCCTCGACACATCCAACTCATACGACATGGCT ATCACTCCCACTACAAGATGCTTTGCACCAAACAGCATGGACGCACCCTTCAACACATCCAACT CATACAACATGGCTATCACTCACATCACATGCTGCCTTGCACCAAACAGCATGGACATGCACCC ACAAGTCACAGATTTGGGTTGGGATAGTTGGGTTTTCAGGCCAGGCTAATGAATTCACCCTGAA AATCACACCCTTAAATAGTTCAGGTAGGGTTTTAAATGTGCGGTTTTAACAAATAAGACTGGAT TCTCATCCATGGAAAAAGATCTATGCATGACAGTTCTAGAAACATTTGCATCTGACTCAATGAG AAGGAACTCCTGTGATACTTTCAAGTATTAACAGATAAAAATTAATTAAGAATACTAGCACAAG CTGCATTGATACCCATGGGATCATACAGCACAAGCTGTGATACTTAAGGGACCGTCTGTTTGAG GCTTTGAGCCTAAAATTGCTAGTTTCACAGCTAGGGGTGACAATAGGCTCTAAATTTTACACTA TAAGATATAAGGATCGGATCAGATTAGGATCGGGCTCTATTTCTATTCATTTTTGAACTAAAAT TTATTTAGGGCCCTACCATTTTGTGAAGAATCATTTGGATCGCAATCCATTACCACCCCTATTC ACAGCCCTAGAATCAATCAAGCACCCAGATTGCAATACCAAATTATAGTACAGACCCCCACACT GTAACATCTAGCAATTCAACCATCTAGAAGCTGCTTATCACAATCAACAGCTGAAACAATCAGG CACTAAATATGGTGCCACTATAACCAATTTAGATGCCTTGGGCTATTCAGTGGCCACTGTTGCT ACAGCAGACTGAATGGGCAACAAGTACAGGTTGTAAAAGCACAAGCAAGAACCCTGCAAAGTGC AAACATTACACCAGAATAGAGATGCCCTACCCACCTACCTCAGAAAACAAAGCATTTTTATCTT CAAATGAAAATAAAAACAAATACACATTGAAATTCAAAAAACAAAATCACTTGCCTGTCCACTA AGTATAGTTCCACCATTATCCTTAACAGCGTCTGCAGCTTTCTTAAATTTTTCATAACCCTGAA AAATACACCAAAAGCACTAGTGATAAACTGGTAACAGAGGCAAACAATACCAAAAAACAAAACC TACAATAGAAGATCCATGCTTCTAGTGAAATAGAAGATTCATGCTCTAGTGAAATAATAAACAG ATGTTATAGTCAGGAAAAAAAACTAGGAAACTAATATTACCTTTGCTAGAGTGTTCTCAAAGCT TTCTTCTTCATCTCTAATAATACATTTGATCTTCTTTTCGTTGTCTTTTAACTCGGGAAATACA TCACCCATCAGTTGGACAAAAACATTTACAAGC |