Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d023741_circ_g.3 |
| ID in PlantcircBase | zma_circ_003115 |
| Alias | circ1466 |
| Organism | Zea mays |
| Position | chr10: 18397161-18401674 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | CIRCexplor2 |
| Parent gene | Zm00001d023741 |
| Parent gene annotation |
Alanine--tRNA ligase |
| Parent gene strand | - |
| Alternative splicing | Zm00001d023741_circ_g.4 Zm00001d023741_circ_g.5 |
| Support reads | 6 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | CT-TA |
| Number of exons covered | Zm00001d023741_T002:5 Zm00001d023741_T005:5 Zm00001d023741_T001:5 Zm00001d023741_T018:6 Zm00001d023741_T003:5 Zm00001d023741_T009:6 Zm00001d023741_T004:6 Zm00001d023741_T016:7 Zm00001d023741_T007:6 Zm00001d023741_T015:6 Zm00001d023741_T021:2 Zm00001d023741_T019:6 Zm00001d023741_T006:3 Zm00001d023741_T008:6 Zm00001d023741_T022:1 Zm00001d023741_T011:6 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.00611286 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |