Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d023741_circ_g.3 |
ID in PlantcircBase | zma_circ_003115 |
Alias | circ1466 |
Organism | Zea mays |
Position | chr10: 18397161-18401674 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d023741 |
Parent gene annotation |
Alanine--tRNA ligase |
Parent gene strand | - |
Alternative splicing | Zm00001d023741_circ_g.4 Zm00001d023741_circ_g.5 |
Support reads | 6 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d023741_T002:5 Zm00001d023741_T005:5 Zm00001d023741_T001:5 Zm00001d023741_T018:6 Zm00001d023741_T003:5 Zm00001d023741_T009:6 Zm00001d023741_T004:6 Zm00001d023741_T016:7 Zm00001d023741_T007:6 Zm00001d023741_T015:6 Zm00001d023741_T021:2 Zm00001d023741_T019:6 Zm00001d023741_T006:3 Zm00001d023741_T008:6 Zm00001d023741_T022:1 Zm00001d023741_T011:6 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.00611286 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |