Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G24350_circ_g.1 |
ID in PlantcircBase | ath_circ_004172 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 8639206-8639505 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | CIRCexplorer, circseq_cup |
Parent gene | AT1G24350 |
Parent gene annotation |
Acid phosphatase/vanadium-dependent haloperoxidase-related prote in |
Parent gene strand | - |
Alternative splicing | AT1G24350_circ_g.2 |
Support reads | 7 |
Tissues | seedlings |
Exon boundary | No-No |
Splicing signals | CT-GA |
Number of exons covered | AT1G24350.3:1 AT1G24350.2:1 AT1G24350.4:1 AT1G24350.5:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.498344445 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to heat stress |
Other Information | |
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References | Pan et al., 2017 |