Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G19940_circ_g.1 |
ID in PlantcircBase | ath_circ_003473 |
Alias | Ath_circ_FC5560 |
Organism | Arabidpsis thaliana |
Position | chr1: 6918840-6919865 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | AT1G19940 |
Parent gene annotation |
Endoglucanase 2 |
Parent gene strand | - |
Alternative splicing | AT1G19940_circ_g.2 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | GT-GA |
Number of exons covered | AT1G19940.1:4 AT1G19940.3:4 AT1G19940.2:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.152581653 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017a |