Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G19940_circ_g.2 |
ID in PlantcircBase | ath_circ_003474 |
Alias | Ath_circ_FC0440 |
Organism | Arabidpsis thaliana |
Position | chr1: 6919720-6920004 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | find_circ |
Parent gene | AT1G19940 |
Parent gene annotation |
Endoglucanase 2 |
Parent gene strand | - |
Alternative splicing | AT1G19940_circ_g.1 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | AT1G19940.3:1 AT1G19940.2:1 AT1G19940.1:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.257390029 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017a |