Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G06820_circ_g.7 |
ID in PlantcircBase | ath_circ_001059 |
Alias | 1:2095069-2095572 |
Organism | Arabidpsis thaliana |
Position | chr1: 2095069-2095572 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G06820 |
Parent gene annotation |
Prolycopene isomerase, chloroplastic |
Parent gene strand | - |
Alternative splicing | AT1G06820_circ_g.1 AT1G06820_circ_g.2 AT1G06820_circ_g.3 AT1G06820_circ_g.4 AT1G06820_circ_g.5 AT1G06820_circ_g.6 |
Support reads | 4/2/2/3 |
Tissues | seedling;root;leaf;flower |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G06820.3:3 AT1G06820.2:3 AT1G06820.1:3 AT1G06820.4:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.170634987 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |