Detailed infomation of each circRNA
General Information | |
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CircRNA Name | POPTR_0011s13770_circ_g.1 |
ID in PlantcircBase | pop_circ_003031 |
Alias | Chr11:15859881|15860108 |
Organism | Populus trichocarpa |
Position | chr11: 16430283-16430510 JBrowse» |
Reference genome | Populus trichocarpa genome v3.0 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | POPTR_0011s13770 |
Parent gene annotation | NA |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | stem cambium |
Exon boundary | No-No |
Splicing signals | TG-CT |
Number of exons covered | POPTR_0011s13770.1:1 POPTR_0011s13770.7:1 POPTR_0011s13770.6:1 POPTR_0011s13770.5:1 POPTR_0011s13770.8:2 POPTR_0011s13770.4:1 POPTR_0011s13770.3:1 |
Conservation Information | |
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Conserved circRNAs |
pbe_circ_000001 ath_circ_029471 ghi_circ_002398 ghi_circ_002397 gma_circ_009095 ghi_circ_001767 gma_circ_008848 zma_circ_004654 |
PMCS | 1.845874854 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zheng et al., 2020 |