Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Gh_D05G3516_circ_g.1 |
ID in PlantcircBase | ghi_circ_002397 |
Alias | ghr_circ_0001635 |
Organism | Gossypium hirsutum |
Position | chrD05: 58082466-58082694 JBrowse» |
Reference genome | v1.1 |
Type | e-circRNA |
Identification method | find_circ; CIRI |
Parent gene | Gh_D05G3516 |
Parent gene annotation |
SIMILAR TO: AT3G09790, ubiquitin 8 |
Parent gene strand | + |
Alternative splicing | D05_circ_ag.9 D05_circ_ag.10 Gh_D05G3516_circ_g.2 |
Support reads | NA |
Tissues | fiber/ stem |
Exon boundary | No-No |
Splicing signals | GT-GA |
Number of exons covered | Gh_D05G3516:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Salih et al., 2020 |