Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os05g0481100_circ_g.8 |
ID in PlantcircBase | osa_circ_042142 |
Alias | NA |
Organism | Oryza sativa |
Position | chr5: 23660912-23661105 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | CIRI-long |
Parent gene | Os05g0481100 |
Parent gene annotation |
Similar to cDNA clone:J013034D11, full insert sequence. (Os05t04 81100-01);Similar to predicted protein. (Os05t0481100-02);Simila r to cDNA clone:J013034D11, full insert sequence. (Os05t0481100- 03);Similar to cDNA clone:J013034D11, full insert sequence. (Os0 5t0481100-04);Similar to cDNA clone:J013034D11, full insert sequ ence. (Os05t0481100-05);Similar to cDNA clone:J013021N20, full i nsert sequence. (Os05t0481100-06) |
Parent gene strand | + |
Alternative splicing | Os05g0481100_circ_g.7 Os05g0481100_circ_g.9 |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os05t0481100-05:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.109106529 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | this study |