Plant Circular RNA Database

Detail information of Zm00001d012525_circ_g.2

			
				
						 General Information
					

				
						CircRNA Name
						Zm00001d012525_circ_g.2
					

						ID in PlantcircBase
						zma_circ_009806
					

						Alias
						Zm08circ00080, GRMZM2G068755_C2
					

						Organism
						
							Zea mays						
					

						Position
						
							chr8: 176072965-176076222  JBrowse»						
					

						Reference genome
						
							AGPv4.38						
					

						Type  
						
							u-circRNA							
									
								

					

						Identification method
						CIRI2
					

						Parent gene
						
							Zm00001d012525						
					

						Parent gene annotation
						
							Protein MOR1
							
					

						Parent gene strand
						+
					

						Alternative splicing
						
							Zm00001d012525_circ_g.1 Zm00001d012525_circ_g.3 						
					

						Support reads
						NA
					

						Tissues
						leaf, endosperm
					

						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

					

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

					

						Number of exons covered
						Zm00001d012525_T003:11
Zm00001d012525_T066:9
Zm00001d012525_T049:11
Zm00001d012525_T029:9
Zm00001d012525_T067:8
Zm00001d012525_T070:8
Zm00001d012525_T061:11
Zm00001d012525_T032:11
Zm00001d012525_T017:10
Zm00001d012525_T025:10
Zm00001d012525_T057:11
Zm00001d012525_T043:11
Zm00001d012525_T044:11
Zm00001d012525_T068:8
Zm00001d012525_T012:11
Zm00001d012525_T039:11
Zm00001d012525_T033:11
Zm00001d012525_T019:11
Zm00001d012525_T045:11
Zm00001d012525_T051:11
Zm00001d012525_T030:11
Zm00001d012525_T031:11
Zm00001d012525_T079:1
Zm00001d012525_T022:11
Zm00001d012525_T008:11
Zm00001d012525_T021:11
Zm00001d012525_T052:11
Zm00001d012525_T010:11
Zm00001d012525_T076:2
Zm00001d012525_T026:11
Zm00001d012525_T060:11
Zm00001d012525_T054:11
Zm00001d012525_T037:11
Zm00001d012525_T005:11
Zm00001d012525_T004:11
Zm00001d012525_T041:11
Zm00001d012525_T014:11
Zm00001d012525_T059:11
Zm00001d012525_T064:9
Zm00001d012525_T048:11
Zm00001d012525_T074:4
Zm00001d012525_T071:6
Zm00001d012525_T015:11
Zm00001d012525_T047:11
Zm00001d012525_T035:11
Zm00001d012525_T040:11
Zm00001d012525_T038:11
Zm00001d012525_T028:11
Zm00001d012525_T018:11
Zm00001d012525_T001:11
Zm00001d012525_T056:11
Zm00001d012525_T020:11
Zm00001d012525_T072:4
Zm00001d012525_T024:11
Zm00001d012525_T002:11

					

			
		

General Information
CircRNA Name	Zm00001d012525_circ_g.2
ID in PlantcircBase	zma_circ_009806
Alias	Zm08circ00080, GRMZM2G068755_C2
Organism	Zea mays
Position	chr8: 176072965-176076222 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d012525
Parent gene annotation	Protein MOR1
Parent gene strand	+
Alternative splicing	Zm00001d012525_circ_g.1 Zm00001d012525_circ_g.3
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d012525_T003:11 Zm00001d012525_T066:9 Zm00001d012525_T049:11 Zm00001d012525_T029:9 Zm00001d012525_T067:8 Zm00001d012525_T070:8 Zm00001d012525_T061:11 Zm00001d012525_T032:11 Zm00001d012525_T017:10 Zm00001d012525_T025:10 Zm00001d012525_T057:11 Zm00001d012525_T043:11 Zm00001d012525_T044:11 Zm00001d012525_T068:8 Zm00001d012525_T012:11 Zm00001d012525_T039:11 Zm00001d012525_T033:11 Zm00001d012525_T019:11 Zm00001d012525_T045:11 Zm00001d012525_T051:11 Zm00001d012525_T030:11 Zm00001d012525_T031:11 Zm00001d012525_T079:1 Zm00001d012525_T022:11 Zm00001d012525_T008:11 Zm00001d012525_T021:11 Zm00001d012525_T052:11 Zm00001d012525_T010:11 Zm00001d012525_T076:2 Zm00001d012525_T026:11 Zm00001d012525_T060:11 Zm00001d012525_T054:11 Zm00001d012525_T037:11 Zm00001d012525_T005:11 Zm00001d012525_T004:11 Zm00001d012525_T041:11 Zm00001d012525_T014:11 Zm00001d012525_T059:11 Zm00001d012525_T064:9 Zm00001d012525_T048:11 Zm00001d012525_T074:4 Zm00001d012525_T071:6 Zm00001d012525_T015:11 Zm00001d012525_T047:11 Zm00001d012525_T035:11 Zm00001d012525_T040:11 Zm00001d012525_T038:11 Zm00001d012525_T028:11 Zm00001d012525_T018:11 Zm00001d012525_T001:11 Zm00001d012525_T056:11 Zm00001d012525_T020:11 Zm00001d012525_T072:4 Zm00001d012525_T024:11 Zm00001d012525_T002:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TACCAAGAAATCTGGACCGTCCAAATCCACTGCAGCAAAAAAGACAGATGGTGGGTCACAGTCT
AAGGCATCAGCTGCTCTTGAGATTGAAGACGTTGAGatccgaacaagaaaaggaacttgaggag
gagtctgtgcccgagacaagcggggctaacacttctgaagaggcagcgacagatggtgtgttct
tctgagga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATCCGAACAAGAAAAGGAACTTGAGGAGGAGTCTGTGCCCGAGACAAGCGGGGCTAACACTTCT
GAAGAGGCAGCGACAGATGGTGTGTTCTTCTGAGGATTATTTATCTGGATATTGCTCTTGGTAG
TTTGTTCAAACTAATGATGGAAATACTTATATAATTCTACTTTGCAGCCCCTGTGGAGATCGAT
GAATATGACCTTGTTGATCCTGTAGACATTTTAACCCCACTAGAAAAGTCTGGATTCTGGGACG
GTGTGGTATGGGACCTGTCTTGAATGCACACGCTATTGGTCACACTATCGTATGAAAAGTAGTT
ATTATATTAGTTTTTGTTGTCTGATGTCAGAAAGCAACAAAATGGTCTGAGAGAAGGGATGCTG
TGGCAGAATTAACCAAGCTTGGTTCGGCAAAAAAAATTGCTCCTGGTGATTTTCATGAAATTTG
CCGGACACTGAAGAAGGTCAAGTCTCTGAGATTGATTTTTTAGCCTGTATTGCATGATTTTTTA
AATCCTTATGTTAATTGTCCAAATTTTCAGCTACCACCCTGTGTAGGGGTGGATATCGAGCCAG
CTTGGCTCGTTATGGCTCGGCTCGTTATAGCTCGTTATTGTAACGAGCCAGCTCGGCTCGGCTC
GTTATACTAACGAGCTAAACAGCTGGCTCGGCTCGGCTCGTTAGGAAGCTCGAGCCAGCTCGTT
AGGCTCGCGAGCCACACAACTAAATATAAAGATCTATATACATAAATATATGTATAACCAAAAA
ATCATATTTTAAGTGTTTAACACTACAAACATGTAGCCATGCAATAATACAATTATTTAAGCAC
ATGGCACATCCACACATGTCCATATCACAGATCATAATAACGAGAAAACAAGACTATGAGAGAT
GAGACGACACCAATGACTAGATAAACTTGTGTTGTGGCTTAGCTCGTTTGGCTCGCGAGCTAGC
TCACGAGCTAAACCGAGCTGGCTCATTAGAGAACCGAGCTAGAATGCTAGCTTGGCTCGCTACA
AAATTAAAACGAGCCGAGTCGAGCCGAGCTACTAACGAGCCGAGTCGAGCGAGTTATCGAGCCA
CGAGTATTTCGTCCAGCCCTAACCCTGTGGGTGTATGTACTATTTCCTTTTTGAAGTCTTATAA
TTAGTCATGGATAATTTGGCTTAGAAGTCAGCACCCAGCACTTCTATCTAAGCTGGAGTGTTGT
GGTAATCAGTATTTTTGTTCTTATGATGGTTTTTTGATACTGCAGCTCATCACAGATGTTAATT
TGGCTGTTTCGGTGGAAGCTACTCAGGCAATTGGGAATTTAGCTAGAGGTTTAAGAGCCCAATT
TTCTGGAAATGCACGAATGCTCCTTCCGGTTTTACTTGTAAGAAGAACAACCTTTTTTCCTGAA
TAACTGAATTTTGCTATTAGATCCTACTGTTACTTTATTGTGTGGACTTTGATGCCCATTGAAA
CTGGCATTTCCATTTGTCCTGATTCTTTTCAACAGGAAAAATTGAAAGAAAAAAAGCCAACAAT
GACAGAAGCACTATCTCAAACACTTCAAGCGATGCACAAGTCTGGTTGTTTTACACTTATTGAT
GTGATTGAAGGTTTGTAATTTTCTAGCAATCTTTATTGCACATGTTTGTTTGTAGCTTTATTTT
CATTGTTGTTTTTTTGGTTTGGAACATATTTTGATTTCCTCCAAAGCATGTTATTGCGTAACCA
TATTCCTTTCACTAAAATGCACTCTAGATCCCTATTAAATTTGGTATAGTTTGTTCCCTAAACC
AGAAAATTACACATTTAAGTTCCCAAAACTTTTTCAAGTAAAGATTAAATCTGAATTTGTTTGA
AATATTCGATAACTGAAAACTTTTAGATGCTGACCTTAGTGAATTTAAGGGAAAACTACCAAGG
GTTGTCCAGGAAAAAAGTATTTGCATTTTTTTATGAATCTCAAGACATGAACCTTTCAGCTTTG
ATCAATCTCTGAACAAGAAAATGCTGTCTTTTGATAATGCAGATGTTCGTGCGGCAGTAAAAAA
CAAGGTGCCCCTTGTTCGTTCTTTAACGCTGACCTGGGTTGCATTTTGCATTGAAACCAGCAAT
AAAGCAACTGTACTAAAGTTGCACAAGGAATATGTTCCTATCTGCATGGAGGTGAATAACCACT
TTATACTTCTAGCTATGTCTGTTTTTATTTTTCTGTTTTGTATTTGTGCTGATCAGTTTTTCAA
TATGTAGTGCTTGAATGATGGTACTCCAGAAGTACGAGATGCATCCTTTTCTGTTTTGACTGCC
ATTGCCAAGGTTTCTTCTTGAGAACTTGCTTTTCTCGTCACTTCATTACGTTACATGTATCAGA
ATGTGGCTTTAAAGCCCGGATTTTTTTGCTACTCTTGCTCTCTATAGATGGTTGGTATGAAACC
ATTGGAACGATCCTTGGAGAAATTAGATGATGTGAGGAAAAAGAAGTTATCAGATATGATTGGT
TCTTCCAGTGACAGTGTTTTGAGTTCAGGAACAGGTTAGTTTTGCTTTTGTAGTTTTACTTGTA
TTCAAATGGATCAAATATCTCTGTTTTGGACTAATTTATGTACAAACTACACTTCTCCAGCTCC
AATCACAACATCAGGAGCAGCCACATCTGCTCGCGGGGTATGTTTATTGATATTCTTATTTCAA
TATTATACGAAGATGTTTGCAACCTGTCAGCCTTCCTCTCCCAAGTGCCTATTTACAGTTCTTG
TGCTGTGTTGGGGAATTCTTGTTAGAAAATTTACCATTTGTGATTGGATTTTGTTAGTTATGGT
TTAAAAAAACTTCCGTATTGTCACAGTAAAAAACTAGAAAAGGGGCAGTTGTTTCAAAAGCTCA
ATGATCACTAGTTATCAACTTTGTTTGTCAGGGCAATGTTTATTTGTGACCAGTTCTGTTGATC
AAATGTTTGACAACCCATGTAAGATTATTCTGTATCTTGCAGGTTGCAGATAGCATGTCAATGA
AGAGATCTGCTGCAAGCATGCTTAGTGGAAAGAAGCCTGTCCAGGCAGCGGTTAGTTTTGTTGG
ATGCATATTTGATGTGTAAGTTTCTAGTATTTGAATTTGTGCACCATGTTCTTATGCGGGTATT
GGTTTCCTTGTTTCCAGGCTGCTACCAAGAAATCTGGACCGTCCAAATCCACTGCAGCAAAAAA
GACAGATGGTGGGTCACAGTCTAAGGCATCAGCTGCTCTTGAGATTGAAGACGTTGAG
						
					

			
		

Sequences
Splice junction sequence	TACCAAGAAATCTGGACCGTCCAAATCCACTGCAGCAAAAAAGACAGATGGTGGGTCACAGTCT AAGGCATCAGCTGCTCTTGAGATTGAAGACGTTGAGatccgaacaagaaaaggaacttgaggag gagtctgtgcccgagacaagcggggctaacacttctgaagaggcagcgacagatggtgtgttct tctgagga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATCCGAACAAGAAAAGGAACTTGAGGAGGAGTCTGTGCCCGAGACAAGCGGGGCTAACACTTCT GAAGAGGCAGCGACAGATGGTGTGTTCTTCTGAGGATTATTTATCTGGATATTGCTCTTGGTAG TTTGTTCAAACTAATGATGGAAATACTTATATAATTCTACTTTGCAGCCCCTGTGGAGATCGAT GAATATGACCTTGTTGATCCTGTAGACATTTTAACCCCACTAGAAAAGTCTGGATTCTGGGACG GTGTGGTATGGGACCTGTCTTGAATGCACACGCTATTGGTCACACTATCGTATGAAAAGTAGTT ATTATATTAGTTTTTGTTGTCTGATGTCAGAAAGCAACAAAATGGTCTGAGAGAAGGGATGCTG TGGCAGAATTAACCAAGCTTGGTTCGGCAAAAAAAATTGCTCCTGGTGATTTTCATGAAATTTG CCGGACACTGAAGAAGGTCAAGTCTCTGAGATTGATTTTTTAGCCTGTATTGCATGATTTTTTA AATCCTTATGTTAATTGTCCAAATTTTCAGCTACCACCCTGTGTAGGGGTGGATATCGAGCCAG CTTGGCTCGTTATGGCTCGGCTCGTTATAGCTCGTTATTGTAACGAGCCAGCTCGGCTCGGCTC GTTATACTAACGAGCTAAACAGCTGGCTCGGCTCGGCTCGTTAGGAAGCTCGAGCCAGCTCGTT AGGCTCGCGAGCCACACAACTAAATATAAAGATCTATATACATAAATATATGTATAACCAAAAA ATCATATTTTAAGTGTTTAACACTACAAACATGTAGCCATGCAATAATACAATTATTTAAGCAC ATGGCACATCCACACATGTCCATATCACAGATCATAATAACGAGAAAACAAGACTATGAGAGAT GAGACGACACCAATGACTAGATAAACTTGTGTTGTGGCTTAGCTCGTTTGGCTCGCGAGCTAGC TCACGAGCTAAACCGAGCTGGCTCATTAGAGAACCGAGCTAGAATGCTAGCTTGGCTCGCTACA AAATTAAAACGAGCCGAGTCGAGCCGAGCTACTAACGAGCCGAGTCGAGCGAGTTATCGAGCCA CGAGTATTTCGTCCAGCCCTAACCCTGTGGGTGTATGTACTATTTCCTTTTTGAAGTCTTATAA TTAGTCATGGATAATTTGGCTTAGAAGTCAGCACCCAGCACTTCTATCTAAGCTGGAGTGTTGT GGTAATCAGTATTTTTGTTCTTATGATGGTTTTTTGATACTGCAGCTCATCACAGATGTTAATT TGGCTGTTTCGGTGGAAGCTACTCAGGCAATTGGGAATTTAGCTAGAGGTTTAAGAGCCCAATT TTCTGGAAATGCACGAATGCTCCTTCCGGTTTTACTTGTAAGAAGAACAACCTTTTTTCCTGAA TAACTGAATTTTGCTATTAGATCCTACTGTTACTTTATTGTGTGGACTTTGATGCCCATTGAAA CTGGCATTTCCATTTGTCCTGATTCTTTTCAACAGGAAAAATTGAAAGAAAAAAAGCCAACAAT GACAGAAGCACTATCTCAAACACTTCAAGCGATGCACAAGTCTGGTTGTTTTACACTTATTGAT GTGATTGAAGGTTTGTAATTTTCTAGCAATCTTTATTGCACATGTTTGTTTGTAGCTTTATTTT CATTGTTGTTTTTTTGGTTTGGAACATATTTTGATTTCCTCCAAAGCATGTTATTGCGTAACCA TATTCCTTTCACTAAAATGCACTCTAGATCCCTATTAAATTTGGTATAGTTTGTTCCCTAAACC AGAAAATTACACATTTAAGTTCCCAAAACTTTTTCAAGTAAAGATTAAATCTGAATTTGTTTGA AATATTCGATAACTGAAAACTTTTAGATGCTGACCTTAGTGAATTTAAGGGAAAACTACCAAGG GTTGTCCAGGAAAAAAGTATTTGCATTTTTTTATGAATCTCAAGACATGAACCTTTCAGCTTTG ATCAATCTCTGAACAAGAAAATGCTGTCTTTTGATAATGCAGATGTTCGTGCGGCAGTAAAAAA CAAGGTGCCCCTTGTTCGTTCTTTAACGCTGACCTGGGTTGCATTTTGCATTGAAACCAGCAAT AAAGCAACTGTACTAAAGTTGCACAAGGAATATGTTCCTATCTGCATGGAGGTGAATAACCACT TTATACTTCTAGCTATGTCTGTTTTTATTTTTCTGTTTTGTATTTGTGCTGATCAGTTTTTCAA TATGTAGTGCTTGAATGATGGTACTCCAGAAGTACGAGATGCATCCTTTTCTGTTTTGACTGCC ATTGCCAAGGTTTCTTCTTGAGAACTTGCTTTTCTCGTCACTTCATTACGTTACATGTATCAGA ATGTGGCTTTAAAGCCCGGATTTTTTTGCTACTCTTGCTCTCTATAGATGGTTGGTATGAAACC ATTGGAACGATCCTTGGAGAAATTAGATGATGTGAGGAAAAAGAAGTTATCAGATATGATTGGT TCTTCCAGTGACAGTGTTTTGAGTTCAGGAACAGGTTAGTTTTGCTTTTGTAGTTTTACTTGTA TTCAAATGGATCAAATATCTCTGTTTTGGACTAATTTATGTACAAACTACACTTCTCCAGCTCC AATCACAACATCAGGAGCAGCCACATCTGCTCGCGGGGTATGTTTATTGATATTCTTATTTCAA TATTATACGAAGATGTTTGCAACCTGTCAGCCTTCCTCTCCCAAGTGCCTATTTACAGTTCTTG TGCTGTGTTGGGGAATTCTTGTTAGAAAATTTACCATTTGTGATTGGATTTTGTTAGTTATGGT TTAAAAAAACTTCCGTATTGTCACAGTAAAAAACTAGAAAAGGGGCAGTTGTTTCAAAAGCTCA ATGATCACTAGTTATCAACTTTGTTTGTCAGGGCAATGTTTATTTGTGACCAGTTCTGTTGATC AAATGTTTGACAACCCATGTAAGATTATTCTGTATCTTGCAGGTTGCAGATAGCATGTCAATGA AGAGATCTGCTGCAAGCATGCTTAGTGGAAAGAAGCCTGTCCAGGCAGCGGTTAGTTTTGTTGG ATGCATATTTGATGTGTAAGTTTCTAGTATTTGAATTTGTGCACCATGTTCTTATGCGGGTATT GGTTTCCTTGTTTCCAGGCTGCTACCAAGAAATCTGGACCGTCCAAATCCACTGCAGCAAAAAA GACAGATGGTGGGTCACAGTCTAAGGCATCAGCTGCTCTTGAGATTGAAGACGTTGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.102760697

Conservation Information
Conserved circRNAs	NA
PMCS	0.102760697

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							176074326-176072985(+)
176076171-176072985(+)
176073187-176076195(-)
						
						Potential amino acid sequence
						
							MLLPVLLEKLKEKKPTMTEALSQTLQAMHKSGCFTLIDVIEDVRAAVKNKVPLVRSLTLTWVAF
CIETSNKATVLKLHKEYVPICMECLNDGTPEVRDASFSVLTAIAKMVGMKPLERSLEKLDDVRK
KKLSDMIGSSSDSVLSSGTAPITTSGAATSARGVADSMSMKRSAASMLSGKKPVQAAAATKKSG
PSKSTAAKKTDGGSQSKASAALEIEDVEIRTRKGT*(+)
MVGHSLRHQLLLRLKTLRSEQEKELEEESVPETSGANTSEEAATDAPVEIDEYDLVDPVDILTP
LEKSGFWDGVKATKWSERRDAVAELTKLGSAKKIAPGDFHEICRTLKKLITDVNLAVSVEATQA
IGNLARGLRAQFSGNARMLLPVLLEKLKEKKPTMTEALSQTLQAMHKSGCFTLIDVIEDVRAAV
KNKVPLVRSLTLTWVAFCIETSNKATVLKLHKEYVPICMECLNDGTPEVRDASFSVLTAIAKMV
GMKPLERSLEKLDDVRKKKLSDMIGSSSDSVLSSGTAPITTSGAATSARGVADSMSMKRSAASM
LSGKKPVQAAAATKKSGPSKSTAAKKTDGGSQSKASAALEIEDVEIRTRKGT*(+)
MSTGSTRSYSSISTGASVAASSEVLAPLVSGTDSSSSSFSCSDLNVFNLKSS*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	176074326-176072985(+) 176076171-176072985(+) 176073187-176076195(-)
Potential amino acid sequence	MLLPVLLEKLKEKKPTMTEALSQTLQAMHKSGCFTLIDVIEDVRAAVKNKVPLVRSLTLTWVAF CIETSNKATVLKLHKEYVPICMECLNDGTPEVRDASFSVLTAIAKMVGMKPLERSLEKLDDVRK KKLSDMIGSSSDSVLSSGTAPITTSGAATSARGVADSMSMKRSAASMLSGKKPVQAAAATKKSG PSKSTAAKKTDGGSQSKASAALEIEDVEIRTRKGT(+) MVGHSLRHQLLLRLKTLRSEQEKELEEESVPETSGANTSEEAATDAPVEIDEYDLVDPVDILTP LEKSGFWDGVKATKWSERRDAVAELTKLGSAKKIAPGDFHEICRTLKKLITDVNLAVSVEATQA IGNLARGLRAQFSGNARMLLPVLLEKLKEKKPTMTEALSQTLQAMHKSGCFTLIDVIEDVRAAV KNKVPLVRSLTLTWVAFCIETSNKATVLKLHKEYVPICMECLNDGTPEVRDASFSVLTAIAKMV GMKPLERSLEKLDDVRKKKLSDMIGSSSDSVLSSGTAPITTSGAATSARGVADSMSMKRSAASM LSGKKPVQAAAATKKSGPSKSTAAKKTDGGSQSKASAALEIEDVEIRTRKGT(+) MSTGSTRSYSSISTGASVAASSEVLAPLVSGTDSSSSSFSCSDLNVFNLKSS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Han et al., 2020;Zhang et al., 2019

circRNA

Detail information of Zm00001d012525_circ_g.2

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