Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os02g0608400_circ_g.1 |
ID in PlantcircBase | osa_circ_015420 |
Alias | NA |
Organism | Oryza sativa |
Position | chr2: 23868289-23872474 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ei-circRNA |
Identification method | PcircRNA_finder |
Parent gene | Os02g0608400 |
Parent gene annotation |
EF-Hand type domain containing protein. (Os02t0608400-01);Simila r to Ca2+ binding protein cbp1. (Os02t0608400-02) |
Parent gene strand | - |
Alternative splicing | Os02g0608400_circ_g.2 Os02g0608400_circ_g.3 Os02g0608400_circ_g.4 Os02g0608400_circ_g.5 Os02g0608400_circ_g.6 Os02g0608400_circ_g.7 Os02g0608400_circ_g.8 Os02g0608400_circ_g.9 Os02g0608400_circ_g.10 |
Support reads | 3 |
Tissues | shoot |
Exon boundary | No-No |
Splicing signals | CC-TA |
Number of exons covered | Os02t0608400-01:9 Os02t0608400-02:9 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.121235033 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |