Plant Circular RNA Database

Detail information of Os02g0167500_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os02g0167500_circ_g.3
					
						ID in PlantcircBase
						osa_circ_013335
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 3625212-3628000  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os02g0167500						
					
						Parent gene annotation
						
							RNA recognition motif domain domain containing protein. (Os02t01
67500-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os02g0167500_circ_g.2 Os02g0167500_circ_g.4 Os02g0167500_circ_g.5 Os02g0167500_circ_g.6 Os02g0167500_circ_g.7 Os02g0167500_circ_g.8 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0167500-01:7

General Information
CircRNA Name	Os02g0167500_circ_g.3
ID in PlantcircBase	osa_circ_013335
Alias	NA
Organism	Oryza sativa
Position	chr2: 3625212-3628000 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os02g0167500
Parent gene annotation	RNA recognition motif domain domain containing protein. (Os02t01 67500-01)
Parent gene strand	-
Alternative splicing	Os02g0167500_circ_g.2 Os02g0167500_circ_g.4 Os02g0167500_circ_g.5 Os02g0167500_circ_g.6 Os02g0167500_circ_g.7 Os02g0167500_circ_g.8
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0167500-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCAATCACATGGCGCAGCAGCAGTCCTGTGCCCATAGTTATACCTTGTAAAATTTTCTTCTCCA
TGAGAAGGCCCACTCATCCCACTAGTTGGTTTACTAttggatccagtccatcattatcacttcc
aagtgaagaagatgatccatatagatttcgcctttctgcagcccgatctctgtactgtgaatgt
cctggagc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1679
Transcript exons: 3625212-3626150,3626314-3626482,3626704-3626874,3626951-
3627019,3627097-3627187,3627264-3627349,3627847-3628000
TTGGATCCAGTCCATCATTATCACTTCCAAGTGAAGAAGATGATCCATATAGATTTCGCCTTTC
TGCAGCCCGATCTCTGTACTGTGAATGTCCTGGAGCCTCAGAAAACCGACGTTTACCACTCCCT
GAAACTCCAGATGGAGTATAAGATGCTAGAGCAGATAATTCTGTTTTGAAGGGAGCAGAAGTAG
GTGCCCCAGCATTTGCTGTTAACCCACATGTGCTTGTTGGTATGTTGGAGAAAGAATCAGCACC
ACCAGCATCAGATGGCGCATGAAATGCAGTGTCTGATCTGACTATTCCTCTACCAGAGCCTCTT
ATGACACCCATAATGGTAGTTCCTAAACTGTTACTGACAGGTGTAGGCTTTATATCAGAATCTA
TCATTTCTGTGGGTGCAGCTGTTCGTCCAAGAGAATTATAGCTAGCAGGCGAGTTCATGTCCTT
AGCATTTCCAACATCAGATTTAGGCTTAGCTTTCACTGCAAATCCAGTTGAATTGTGTAAATTG
TTTAATTTATCATCAGCAGAGTTGGATGGTTCCTTGTCATCAAGGATAGCACGCCCTGCCTGGC
CTTCTTGATTTCTTTGTTTCCACATTGCTAGGACATTATTCATCTTTTTCTTATTCGCCAAAAG
ACTACCTTTTGATGCCAACTTGATCTCTTTTGCTCTCTCCTTTTCTTTCTTTTCTGCAGCCAGC
GCTGCACTTGCAGCAGCTTGAACAGCTTCAGGTAATGAAGTTTTCTCACTTTGTTTAATCGTGG
CTGCAGGTGCAGAAATCACTACATTTTTACCACTACTTTCTGAGGTCTTCGTGCTAGTATTTGC
CATGTCCCCAGCTGCTTTACTGCTGTTCTGTTCACTACAAGGGACATACTGTTGAGTTTGTTGA
TCATATGAATACCACACTCCAGCATTACCATCATAGTAAAGTCCGGTATTTCCATCATAATAGA
ATCCTGAGGCTGAATCATAGTAATAACCAGACTTTTCATCCCAAACAAATCCAGACTGTGGAGC
AGAGCCACTGCTCTGAGGTTCCGAGTTGCTATTCAGTTTGTCATCAGGATTGTACTCTTTTGGG
GCCCAACCTATAGCATCATACTGCTGAGAAAATGATGCAGCCTCAATGGCAGCTGCAGCAAGGC
TGTTTGACTGTGAAGCCCCTGATACCGGTCCATGTGTGCTTTTAGCATAAGTTACACGTAAAAC
CTGACCATTCTTCTCAAGTGTAATCCCATTCGTAGCTTCAAGAGCTTTTGTAGCTTCTTCCACT
GAATGAAAATGGATGAAAGCAAAACCTCTGGACACATGAGTAAACTTATCCCGAACAAGGCGAA
TGTCCTTTATAGGTGCATGCTTGGCAAATTCATATCGAAGCATTTCCTCGTCAGCATTTTCATC
CAGACCACGAACAACTAAAACATGAGTTGGACCTAGTTCAGATCCCCTTTTTGGATGGAGTGGA
GTAGAACTTGTTGGATCAGCTGGTAGAGAATCTTCCGTTCGTGGTTCATTACACTGAAAACATG
AAGTTCTGCGAGCAAAGTTCATGCATCCACATATAGTACATATCCAATCACATGGCGCAGCAGC
AGTCCTGTGCCCATAGTTATACCTTGTAAAATTTTCTTCTCCATGAGAAGGCCCACTCATCCCA
CTAGTTGGTTTACTA
						
					

						Genomic sequence
						
							TTGGATCCAGTCCATCATTATCACTTCCAAGTGAAGAAGATGATCCATATAGATTTCGCCTTTC
TGCAGCCCGATCTCTGTACTGTGAATGTCCTGGAGCCTCAGAAAACCGACGTTTACCACTCCCT
GAAACTCCAGATGGAGTATAAGATGCTAGAGCAGATAATTCTGTTTTGAAGGGAGCAGAAGTAG
GTGCCCCAGCATTTGCTGTTAACCCACATGTGCTTGTTGGTATGTTGGAGAAAGAATCAGCACC
ACCAGCATCAGATGGCGCATGAAATGCAGTGTCTGATCTGACTATTCCTCTACCAGAGCCTCTT
ATGACACCCATAATGGTAGTTCCTAAACTGTTACTGACAGGTGTAGGCTTTATATCAGAATCTA
TCATTTCTGTGGGTGCAGCTGTTCGTCCAAGAGAATTATAGCTAGCAGGCGAGTTCATGTCCTT
AGCATTTCCAACATCAGATTTAGGCTTAGCTTTCACTGCAAATCCAGTTGAATTGTGTAAATTG
TTTAATTTATCATCAGCAGAGTTGGATGGTTCCTTGTCATCAAGGATAGCACGCCCTGCCTGGC
CTTCTTGATTTCTTTGTTTCCACATTGCTAGGACATTATTCATCTTTTTCTTATTCGCCAAAAG
ACTACCTTTTGATGCCAACTTGATCTCTTTTGCTCTCTCCTTTTCTTTCTTTTCTGCAGCCAGC
GCTGCACTTGCAGCAGCTTGAACAGCTTCAGGTAATGAAGTTTTCTCACTTTGTTTAATCGTGG
CTGCAGGTGCAGAAATCACTACATTTTTACCACTACTTTCTGAGGTCTTCGTGCTAGTATTTGC
CATGTCCCCAGCTGCTTTACTGCTGTTCTGTTCACTACAAGGGACATACTGTTGAGTTTGTTGA
TCATATGAATACCACACTCCAGCATTACCATCATAGTAAAGTCCTGAAAACAAATACAAGGTTA
TAAACTGTAATACTTTAACAATTGACATGGAGCAAACATTTTTTTTTAAAAAAAAGGAAAATTG
GAAAACATTTCAAAAACAAGTCACATGGAAAGTATTTCTGAATTGATCATAGTAAGAAAATTGT
GGCAATATACATACCGGTATTTCCATCATAATAGAATCCTGAGGCTGAATCATAGTAATAACCA
GACTTTTCATCCCAAACAAATCCAGACTGTGGAGCAGAGCCACTGCTCTGAGGTTCCGAGTTGC
TATTCAGTTTGTCATCAGGATTGTACTCTTTTGGGGCCCAACCTATAGCATCATACTGGTCCAA
AGGGTAAAAGAAATAAAATAATAAGCATCATGTCTATAATCTGCATAAATTGTATGTGAAAAAC
AATTGCACCTTACCCTACAGGGTGAGAAATTATTGGTTTTAGTGCATCATTTAATGGAGTTACA
TAACAGCAGTTCTCATTTTCTTCAATGCACTGTTTACTTTCCTGTGCACATGGTGACAAATTAC
AAGTAGGGGCTACAACTGACCTGCTGAGAAAATGATGCAGCCTCAATGGCAGCTGCAGCAAGGC
TGTTTGACTGTGAAGCCCCTGATACCGGTCCATGTGTGCTTTTAGCATAAGTTACACGTAAAAC
CTGACCATTCTTCTCAAGTGTAATCCCATTCGTAGCTTCAAGAGCTTTTGTAGCTTCTTCCACC
TAACACAATTGGATGCAGATAAATATGGGAGTAGACATCAAAGGAAAACTCAACATTTTTCCCA
CCACTACTTACTGAATGAAAATGGATGAAAGCAAAACCTCTGGACACATGAGTAAACTTATCCC
GAACAAGGCGAATGTCCTGCACAACAACAGCATGTCATTCTCTCAACAGAAACGGAACACTGCA
AATTTCAAGAGTCATAAGCTTCTTCCCACCTTTATAGGTGCATGCTTGGCAAATTCATATCGAA
GCATTTCCTCGTCAGCATTTTCATCCAGACCACGAACAACTAAAACATGAGTTGGACCTGAAAA
TGCTAGTGTCTAATAAGGCAACTGGCAAAATAGTTTTAATAATCCTACAATAGAAGAACAGAGC
TTTGCCTAGTTCAGATCCCCTTTTTGGATGGAGTGGAGTAGAACTTGTTGGATCAGCTGGTAGA
GAATCTTCCGTTCGTGGTTCATTACACTACAAGAATAGAATGCAATTAGGCAAAAAAAAATCAA
GAGCTTAAATAAACAAACATACAATCAGTTAGAAAGAAATGTTATTCCCCTGATGCCTTTATAA
TTGTCATCTTGGTCCTTGGAGATAGACAAAGTAGTTTTCATGACAAATTCACTAATGGCATTTT
CCATGTGACACATCTTATTATTTTGTTTATATTTATACTAGTGGCTAATGATCCAAACATCATG
AGTTAATCCAAAAGCTTACAGTTTATGCAATTATGACACTACTTAATTTGCAACTTCTCATTAA
CAATAGGGATGTTGAATCGAAAGGGAAAACAGTACTCCATCAAGGAAATCGAGGACAGAGAAAC
AATCCAAGCATGCTAGATTGGATTTATAAACAGAAATGACATCATGCAAACTTCTGTAAGACAA
TACTAAATGCAATGGGTATTGCGATGAAGAACACGCCTACAAAAATAATTTACAACAATACAGA
GTAAAACATACCTGAAAACATGAAGTTCTGCGAGCAAAGTTCATGCATCCACATATAGTACATA
TCCAATCACATGGCGCAGCAGCAGTCCTGTGCCCATAGTTATACCTTGTAAAATTTTCTTCTCC
ATGAGAAGGCCCACTCATCCCACTAGTTGGTTTACTA
						
					

			
		

Sequences
Splice junction sequence	CCAATCACATGGCGCAGCAGCAGTCCTGTGCCCATAGTTATACCTTGTAAAATTTTCTTCTCCA TGAGAAGGCCCACTCATCCCACTAGTTGGTTTACTAttggatccagtccatcattatcacttcc aagtgaagaagatgatccatatagatttcgcctttctgcagcccgatctctgtactgtgaatgt cctggagc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1679 Transcript exons: 3625212-3626150,3626314-3626482,3626704-3626874,3626951- 3627019,3627097-3627187,3627264-3627349,3627847-3628000 TTGGATCCAGTCCATCATTATCACTTCCAAGTGAAGAAGATGATCCATATAGATTTCGCCTTTC TGCAGCCCGATCTCTGTACTGTGAATGTCCTGGAGCCTCAGAAAACCGACGTTTACCACTCCCT GAAACTCCAGATGGAGTATAAGATGCTAGAGCAGATAATTCTGTTTTGAAGGGAGCAGAAGTAG GTGCCCCAGCATTTGCTGTTAACCCACATGTGCTTGTTGGTATGTTGGAGAAAGAATCAGCACC ACCAGCATCAGATGGCGCATGAAATGCAGTGTCTGATCTGACTATTCCTCTACCAGAGCCTCTT ATGACACCCATAATGGTAGTTCCTAAACTGTTACTGACAGGTGTAGGCTTTATATCAGAATCTA TCATTTCTGTGGGTGCAGCTGTTCGTCCAAGAGAATTATAGCTAGCAGGCGAGTTCATGTCCTT AGCATTTCCAACATCAGATTTAGGCTTAGCTTTCACTGCAAATCCAGTTGAATTGTGTAAATTG TTTAATTTATCATCAGCAGAGTTGGATGGTTCCTTGTCATCAAGGATAGCACGCCCTGCCTGGC CTTCTTGATTTCTTTGTTTCCACATTGCTAGGACATTATTCATCTTTTTCTTATTCGCCAAAAG ACTACCTTTTGATGCCAACTTGATCTCTTTTGCTCTCTCCTTTTCTTTCTTTTCTGCAGCCAGC GCTGCACTTGCAGCAGCTTGAACAGCTTCAGGTAATGAAGTTTTCTCACTTTGTTTAATCGTGG CTGCAGGTGCAGAAATCACTACATTTTTACCACTACTTTCTGAGGTCTTCGTGCTAGTATTTGC CATGTCCCCAGCTGCTTTACTGCTGTTCTGTTCACTACAAGGGACATACTGTTGAGTTTGTTGA TCATATGAATACCACACTCCAGCATTACCATCATAGTAAAGTCCGGTATTTCCATCATAATAGA ATCCTGAGGCTGAATCATAGTAATAACCAGACTTTTCATCCCAAACAAATCCAGACTGTGGAGC AGAGCCACTGCTCTGAGGTTCCGAGTTGCTATTCAGTTTGTCATCAGGATTGTACTCTTTTGGG GCCCAACCTATAGCATCATACTGCTGAGAAAATGATGCAGCCTCAATGGCAGCTGCAGCAAGGC TGTTTGACTGTGAAGCCCCTGATACCGGTCCATGTGTGCTTTTAGCATAAGTTACACGTAAAAC CTGACCATTCTTCTCAAGTGTAATCCCATTCGTAGCTTCAAGAGCTTTTGTAGCTTCTTCCACT GAATGAAAATGGATGAAAGCAAAACCTCTGGACACATGAGTAAACTTATCCCGAACAAGGCGAA TGTCCTTTATAGGTGCATGCTTGGCAAATTCATATCGAAGCATTTCCTCGTCAGCATTTTCATC CAGACCACGAACAACTAAAACATGAGTTGGACCTAGTTCAGATCCCCTTTTTGGATGGAGTGGA GTAGAACTTGTTGGATCAGCTGGTAGAGAATCTTCCGTTCGTGGTTCATTACACTGAAAACATG AAGTTCTGCGAGCAAAGTTCATGCATCCACATATAGTACATATCCAATCACATGGCGCAGCAGC AGTCCTGTGCCCATAGTTATACCTTGTAAAATTTTCTTCTCCATGAGAAGGCCCACTCATCCCA CTAGTTGGTTTACTA
Genomic sequence	TTGGATCCAGTCCATCATTATCACTTCCAAGTGAAGAAGATGATCCATATAGATTTCGCCTTTC TGCAGCCCGATCTCTGTACTGTGAATGTCCTGGAGCCTCAGAAAACCGACGTTTACCACTCCCT GAAACTCCAGATGGAGTATAAGATGCTAGAGCAGATAATTCTGTTTTGAAGGGAGCAGAAGTAG GTGCCCCAGCATTTGCTGTTAACCCACATGTGCTTGTTGGTATGTTGGAGAAAGAATCAGCACC ACCAGCATCAGATGGCGCATGAAATGCAGTGTCTGATCTGACTATTCCTCTACCAGAGCCTCTT ATGACACCCATAATGGTAGTTCCTAAACTGTTACTGACAGGTGTAGGCTTTATATCAGAATCTA TCATTTCTGTGGGTGCAGCTGTTCGTCCAAGAGAATTATAGCTAGCAGGCGAGTTCATGTCCTT AGCATTTCCAACATCAGATTTAGGCTTAGCTTTCACTGCAAATCCAGTTGAATTGTGTAAATTG TTTAATTTATCATCAGCAGAGTTGGATGGTTCCTTGTCATCAAGGATAGCACGCCCTGCCTGGC CTTCTTGATTTCTTTGTTTCCACATTGCTAGGACATTATTCATCTTTTTCTTATTCGCCAAAAG ACTACCTTTTGATGCCAACTTGATCTCTTTTGCTCTCTCCTTTTCTTTCTTTTCTGCAGCCAGC GCTGCACTTGCAGCAGCTTGAACAGCTTCAGGTAATGAAGTTTTCTCACTTTGTTTAATCGTGG CTGCAGGTGCAGAAATCACTACATTTTTACCACTACTTTCTGAGGTCTTCGTGCTAGTATTTGC CATGTCCCCAGCTGCTTTACTGCTGTTCTGTTCACTACAAGGGACATACTGTTGAGTTTGTTGA TCATATGAATACCACACTCCAGCATTACCATCATAGTAAAGTCCTGAAAACAAATACAAGGTTA TAAACTGTAATACTTTAACAATTGACATGGAGCAAACATTTTTTTTTAAAAAAAAGGAAAATTG GAAAACATTTCAAAAACAAGTCACATGGAAAGTATTTCTGAATTGATCATAGTAAGAAAATTGT GGCAATATACATACCGGTATTTCCATCATAATAGAATCCTGAGGCTGAATCATAGTAATAACCA GACTTTTCATCCCAAACAAATCCAGACTGTGGAGCAGAGCCACTGCTCTGAGGTTCCGAGTTGC TATTCAGTTTGTCATCAGGATTGTACTCTTTTGGGGCCCAACCTATAGCATCATACTGGTCCAA AGGGTAAAAGAAATAAAATAATAAGCATCATGTCTATAATCTGCATAAATTGTATGTGAAAAAC AATTGCACCTTACCCTACAGGGTGAGAAATTATTGGTTTTAGTGCATCATTTAATGGAGTTACA TAACAGCAGTTCTCATTTTCTTCAATGCACTGTTTACTTTCCTGTGCACATGGTGACAAATTAC AAGTAGGGGCTACAACTGACCTGCTGAGAAAATGATGCAGCCTCAATGGCAGCTGCAGCAAGGC TGTTTGACTGTGAAGCCCCTGATACCGGTCCATGTGTGCTTTTAGCATAAGTTACACGTAAAAC CTGACCATTCTTCTCAAGTGTAATCCCATTCGTAGCTTCAAGAGCTTTTGTAGCTTCTTCCACC TAACACAATTGGATGCAGATAAATATGGGAGTAGACATCAAAGGAAAACTCAACATTTTTCCCA CCACTACTTACTGAATGAAAATGGATGAAAGCAAAACCTCTGGACACATGAGTAAACTTATCCC GAACAAGGCGAATGTCCTGCACAACAACAGCATGTCATTCTCTCAACAGAAACGGAACACTGCA AATTTCAAGAGTCATAAGCTTCTTCCCACCTTTATAGGTGCATGCTTGGCAAATTCATATCGAA GCATTTCCTCGTCAGCATTTTCATCCAGACCACGAACAACTAAAACATGAGTTGGACCTGAAAA TGCTAGTGTCTAATAAGGCAACTGGCAAAATAGTTTTAATAATCCTACAATAGAAGAACAGAGC TTTGCCTAGTTCAGATCCCCTTTTTGGATGGAGTGGAGTAGAACTTGTTGGATCAGCTGGTAGA GAATCTTCCGTTCGTGGTTCATTACACTACAAGAATAGAATGCAATTAGGCAAAAAAAAATCAA GAGCTTAAATAAACAAACATACAATCAGTTAGAAAGAAATGTTATTCCCCTGATGCCTTTATAA TTGTCATCTTGGTCCTTGGAGATAGACAAAGTAGTTTTCATGACAAATTCACTAATGGCATTTT CCATGTGACACATCTTATTATTTTGTTTATATTTATACTAGTGGCTAATGATCCAAACATCATG AGTTAATCCAAAAGCTTACAGTTTATGCAATTATGACACTACTTAATTTGCAACTTCTCATTAA CAATAGGGATGTTGAATCGAAAGGGAAAACAGTACTCCATCAAGGAAATCGAGGACAGAGAAAC AATCCAAGCATGCTAGATTGGATTTATAAACAGAAATGACATCATGCAAACTTCTGTAAGACAA TACTAAATGCAATGGGTATTGCGATGAAGAACACGCCTACAAAAATAATTTACAACAATACAGA GTAAAACATACCTGAAAACATGAAGTTCTGCGAGCAAAGTTCATGCATCCACATATAGTACATA TCCAATCACATGGCGCAGCAGCAGTCCTGTGCCCATAGTTATACCTTGTAAAATTTTCTTCTCC ATGAGAAGGCCCACTCATCCCACTAGTTGGTTTACTA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.359061835

Conservation Information
Conserved circRNAs	NA
PMCS	0.359061835

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							3627965-3625357(+)
3627983-3627980(-)
						
						Potential amino acid sequence
						
							MRRPTHPTSWFTIGSSPSLSLPSEEDDPYRFRLSAARSLYCECPGASENRRLPLPETPDGV*(+
)
MSGPSHGEENFTRYNYGHRTAAAPCDWICTICGCMNFARRTSCFQCNEPRTEDSLPADPTSSTP
LHPKRGSELGPTHVLVVRGLDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFIHFHSV
EEATKALEATNGITLEKNGQVLRVTYAKSTHGPVSGASQSNSLAAAAIEAASFSQQYDAIGWAP
KEYNPDDKLNSNSEPQSSGSAPQSGFVWDEKSGYYYDSASGFYYDGNTGLYYDGNAGVWYSYDQ
QTQQYVPCSEQNSSKAAGDMANTSTKTSESSGKNVVISAPAATIKQSEKTSLPEAVQAAASAAL
AAEKKEKERAKEIKLASKGSLLANKKKMNNVLAMWKQRNQEGQAGRAILDDKEPSNSADDKLNN
LHNSTGFAVKAKPKSDVGNAKDMNSPASYNSLGRTAAPTEMIDSDIKPTPVSNSLGTTIMGVIR
GSGRGIVRSDTAFHAPSDAGGADSFSNIPTSTCGLTANAGAPTSAPFKTELSALASYTPSGVSG
SGKRRFSEAPGHSQYRDRAAERRNLYGSSSSLGSDNDGLDPIVNQLVG*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	3627965-3625357(+) 3627983-3627980(-)
Potential amino acid sequence	MRRPTHPTSWFTIGSSPSLSLPSEEDDPYRFRLSAARSLYCECPGASENRRLPLPETPDGV(+ ) MSGPSHGEENFTRYNYGHRTAAAPCDWICTICGCMNFARRTSCFQCNEPRTEDSLPADPTSSTP LHPKRGSELGPTHVLVVRGLDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFIHFHSV EEATKALEATNGITLEKNGQVLRVTYAKSTHGPVSGASQSNSLAAAAIEAASFSQQYDAIGWAP KEYNPDDKLNSNSEPQSSGSAPQSGFVWDEKSGYYYDSASGFYYDGNTGLYYDGNAGVWYSYDQ QTQQYVPCSEQNSSKAAGDMANTSTKTSESSGKNVVISAPAATIKQSEKTSLPEAVQAAASAAL AAEKKEKERAKEIKLASKGSLLANKKKMNNVLAMWKQRNQEGQAGRAILDDKEPSNSADDKLNN LHNSTGFAVKAKPKSDVGNAKDMNSPASYNSLGRTAAPTEMIDSDIKPTPVSNSLGTTIMGVIR GSGRGIVRSDTAFHAPSDAGGADSFSNIPTSTCGLTANAGAPTSAPFKTELSALASYTPSGVSG SGKRRFSEAPGHSQYRDRAAERRNLYGSSSSLGSDNDGLDPIVNQLVG(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os02g0167500_circ_g.3

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