Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G08620_circ_g.2 |
ID in PlantcircBase | ath_circ_001430 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 2736847-2737245 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | CIRCexplorer |
Parent gene | AT1G08620 |
Parent gene annotation |
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
Parent gene strand | + |
Alternative splicing | AT1G08620_circ_g.1 |
Support reads | 1 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GA-AG |
Number of exons covered | AT1G08620.3:1 AT1G08620.4:1 AT1G08620.1:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.325245672 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |