Plant Circular RNA Database

Detail information of Os04g0442300_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os04g0442300_circ_g.4
					
						ID in PlantcircBase
						osa_circ_023952
					
						Alias
						Os04circ05900/Os_ciR889
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 22024210-22026613  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ui-circRNA							
									
						Identification method
						SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os04g0442300						
					
						Parent gene annotation
						
							A-type response regulator, Cytokinin signaling (Os04t0442300-01)
;A-type response regulator, Cytokinin signaling (Os04t0442300-02
)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os04g0442300_circ_g.1 Os04g0442300_circ_g.2 Os04g0442300_circ_g.3 Os04g0442300_circ_g.5 						
					
						Support reads
						11/25
					
						Tissues
						leaf/root
					
						Exon boundary  
						
							No-No							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0442300-02:4
Os04t0442300-01:4

General Information
CircRNA Name	Os04g0442300_circ_g.4
ID in PlantcircBase	osa_circ_023952
Alias	Os04circ05900/Os_ciR889
Organism	Oryza sativa
Position	chr4: 22024210-22026613 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ui-circRNA
Identification method	SMALT, Segemehl, find_circ
Parent gene	Os04g0442300
Parent gene annotation	A-type response regulator, Cytokinin signaling (Os04t0442300-01) ;A-type response regulator, Cytokinin signaling (Os04t0442300-02 )
Parent gene strand	-
Alternative splicing	Os04g0442300_circ_g.1 Os04g0442300_circ_g.2 Os04g0442300_circ_g.3 Os04g0442300_circ_g.5
Support reads	11/25
Tissues	leaf/root
Exon boundary	No-No "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0442300-02:4 Os04t0442300-01:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTCGCCATTTGTTAATGATCTGATCCTCGTTTCTTGCAGGCTTGCAGCAGCAGCAGGGCATCGG
CGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTGgtgaggagttgccatcggcgaaaggaaa
gggcaaggaaaaagctctctgaatgtcacatcgacatatcagccaagatcccaaccaaaaagga
catcagat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 187
Transcript exons: 22024210-22024336,22026554-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGC
TTGCAGCAGCAGCAGGGCATCGGCGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 221
Transcript exons: 22024210-22024357,22025879-22025918,22026581-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTCGAT
TATGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 290
Transcript exons: 22024210-22024394,22025863-22025918,22026565-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGAGGGCT
CAGCGCCTGCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTAGCAGGGCATCGGCG
GCGATTATGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 329
Transcript exons: 22024210-22024347,22025765-22025918,22026577-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTG
GGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAA
CATCCAATGAAGCCATGAGCCAATCACACATCAGGTGCGGCGATTATGGACGGTAATGGCGTTG
GTTTAAGTG
Transcript length: 380
Transcript exons: 22024210-22024401,22025779-22025918,22026566-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCAG
AAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTTTTCCGACGACATGAC
GATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATGAAGCCATGAGCCAAT
CACACATCAGGTGCAGGGCATCGGCGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 402
Transcript exons: 22024210-22024394,22025766-22025918,22026550-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAAAAAAAG
AAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTTTTCCGACGA
CATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATGAAGCCATGA
GCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTATGGACGGTA
ATGGCGTTGGTTTAAGTG
Transcript length: 402
Transcript exons: 22024210-22024396,22025764-22025918,22026554-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCGGAAA
AAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTTTTCCG
ACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATGAAGCC
ATGAGCCAATCACACATCAGGTCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTATGGACGGTA
ATGGCGTTGGTTTAAGTG
Transcript length: 403
Transcript exons: 22024210-22024395,22025766-22025918,22026550-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGAAAAAA
GAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTTTTCCGACG
ACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATGAAGCCATG
AGCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTATGGACGGT
AATGGCGTTGGTTTAAGTG
Transcript length: 411
Transcript exons: 22024210-22024316,22025214-22025321,22025759-22025918,22
026578-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCGTGGATCTCTGTATCTGATA
CAGCATCTTCTCAGAGGTCGAACGCCCATTCGACCAAAGTGCGGATCATAATGGGAAGGCAAGT
ACATGAACAGGCCAAGATGGGGTCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGC
CTCACCTGCTGATCCTCTGGGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAG
AGGGCTCAGCGCCTGCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTCGGCGATTA
TGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 411
Transcript exons: 22024210-22024399,22025758-22025918,22026554-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCGC
TGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCT
CGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCC
AATGAAGCCATGAGCCAATCACACATCAGGTCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTA
TGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 411
Transcript exons: 22024210-22024401,22025764-22025918,22026550-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCAG
GGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTT
TTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATG
AAGCCATGAGCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTA
TGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 417
Transcript exons: 22024210-22024396,22025749-22025918,22026554-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCGAAAC
AGATGCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCT
GGGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAA
ACATCCAATGAAGCCATGAGCCAATCACACATCAGGTCTTGCAGCAGCAGCAGGGCATCGGCGG
CGATTATGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 420
Transcript exons: 22024210-22024395,22025749-22025918,22026550-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGGAAACA
GATGCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTG
GGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAA
CATCCAATGAAGCCATGAGCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGGCATCGG
CGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG
Transcript length: 554
Transcript exons: 22024210-22024400,22025188-22025321,22025754-22025918,22
026550-22026613
GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCAC
AGCAATCAATGAACCACACAAATGTCGTGGATCTCTGTATCTGATACAGCATCTTCTCAGAGGT
CGAACGCCCATTCGACCAAAGTGCGGATCATAATGGGAAGGCAAGTACATGAACAGGCCAAGAT
GGGGTAGATGCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGAT
CCTCTGGGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCC
TGCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGG
CATCGGCGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG
						
					

						Genomic sequence
						
							GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA
TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG
ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCAG
GTTAGAATCTCAAAGCAAACAATCTACCTAAAACTTCCATCATCATCATCATCATCTGTTGTAA
CATTAACCTCCTCTCCATGCTGCTCTTTCAGTGCAGAAAGCTATCGCAAACAAGAAAGAGCTTT
GCCAGTTGCAGCCTGCCTTTGCATTTGGACTGCACCGGTTGCTTCATTCGTCAAGCACACCACA
GGTTGAGGAAGCAGCCGTTTGACCATCTGTGCAGCAGCTCACCCAGGCACAGGATGGCGTACAC
CAGCAGGATGAACTTGAAGAGGAAAGGGAAGTAATGTGACAGCTCGACGCTCGACGAGTGCAGG
ACCTGAAAGAGAAAACGCAGCGGCAAGCAAATTGAGGCGATGGTTCTCTTTCTTGTAAAACTCT
CCGATGGCAACAGGTGACGACAATGCAGGTGGTTGAGTATAGCATATGCAGTGCATGAGGGGGG
GACTTGCCATGGCAACTCCAGCGAAGTGCGCCCGACGCCGGGACGGCGGCGGCGGCGGCGACGC
GGCGGTGGCGTCGACGACGACGTGGTCCGATGGCAGCAGCAGCAGCGGCGGCTTGCCGTCGCTC
CCGGCGTCGCAGCACTGCGTGTTCGCCGGCGAGCAGTTCCTGAGACGCTGTACGTCCTTGCTTT
GAAGAGGCTTTACGATGAAATCTTCAGCACCAGCATTCATGCATCTGTGTTTAGAAAAAGATTT
TTTTTAAGAAAAAAAATCTTCTTATACTGCAGGATCACAGCAGTACTAGTACAGTACTAACAGG
ATATCAGAGATCACGAGACAGCAATCAATGAACCACACAAATGTCGTGGATCTCTGTATCTGAT
ACAGCATCTTCTCAGAGGTCGAACGCCCATTCGACCAAAGTGCGGATCATAATGGGAAGGCAAG
TACATGAACAGGCCAAGATGGGGTATTTACTGAAGCATTATTATTTCTCTTCCACTTCCTCGGT
TATATTTTAAATGCAACTATAAATTTTCGTGTCTAACTTTGATCGTTCGTCTTATTTAAAAATT
TGTTATAATTAGTATTTTTGTTGTTATGAGATGATAAAACATGAATGGTACTTTATGCATGACT
TATGTTTTTAAATTTTTTTAATTTTTTTTTAAATAAGACAGATGATTAAAGTTGAGTATGAAAA
AGTATGGCTACACTTAAAATACGATAGAGGGAGTACAAATCTATGAAGCTTTTTAAATGGATGG
ATGTATATAGCCATACGTATGTACAGTTCGCTACTCAGTTGTACACTCGGTACAGTGTACTCCT
ATTGTGCAGCAGGCAGAGGTATTGGGACCAAATTAAGACAGCTCCCCTTTTTTTTTTTACTTGC
ACAGAAACAGATGCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCT
GATCCTCTGGGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGC
GCCTGCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTTATTACTGGAACTAATCAC
TACTACTGCTAATTAGTACTAGGGACACCAAAATAGTAGTAGCAACAGCGCAAGTCTGAATTTC
TGCATTAACAGTATTTGTATTTATTTTACCTTGATGGCTTTGAGAAGCTCATAACCAGTCATCT
CAGGCATGCAGTAGTCGGTGAGCACCATGTCGATGGCCTGCTCCTGCACATGATATTAAAAAGA
GTTTATTTAGCCATCCAATCACATCCTGGTTAGCTGTAATTACACCCAGCCGTGTCACTACCAC
TCCTGTGTTGAGCTCACAGGGCACACCAAGAATCAAACCCATGCCATTAACCAATCCCATTAAC
CCAAGCTTGGTGTCATCAAGACACCAGACAGCTCTGTCAGGCTGCTGTAAGACGGCGAGTTTTT
CTCTCTTTTTTAGTAGTATTTTTTTTCTTCTTCCTCTGCATGTCTCTCTCCCCCATGAAAAGAG
GCCACCTTTTGCTCCCAAAAGGCGGAGACGAGGAGGAACAGAAACCCTCACGCGCGCACGCGCG
CCGTACGGCCGGCGTACGGCCGGCGGTGCAGCGCCGCCGGCGAGAGGAGGAAAACAAAAATGGC
GTCGCCATTTGTTAATGATCTGATCCTCGTTTCTTGCAGGCTTGCAGCAGCAGCAGGGCATCGG
CGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG
						
					

			
		

Sequences
Splice junction sequence	GTCGCCATTTGTTAATGATCTGATCCTCGTTTCTTGCAGGCTTGCAGCAGCAGCAGGGCATCGG CGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTGgtgaggagttgccatcggcgaaaggaaa gggcaaggaaaaagctctctgaatgtcacatcgacatatcagccaagatcccaaccaaaaagga catcagat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 187 Transcript exons: 22024210-22024336,22026554-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGC TTGCAGCAGCAGCAGGGCATCGGCGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 221 Transcript exons: 22024210-22024357,22025879-22025918,22026581-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTCGAT TATGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 290 Transcript exons: 22024210-22024394,22025863-22025918,22026565-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGAGGGCT CAGCGCCTGCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTAGCAGGGCATCGGCG GCGATTATGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 329 Transcript exons: 22024210-22024347,22025765-22025918,22026577-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTG GGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAA CATCCAATGAAGCCATGAGCCAATCACACATCAGGTGCGGCGATTATGGACGGTAATGGCGTTG GTTTAAGTG Transcript length: 380 Transcript exons: 22024210-22024401,22025779-22025918,22026566-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCAG AAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTTTTCCGACGACATGAC GATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATGAAGCCATGAGCCAAT CACACATCAGGTGCAGGGCATCGGCGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 402 Transcript exons: 22024210-22024394,22025766-22025918,22026550-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAAAAAAAG AAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTTTTCCGACGA CATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATGAAGCCATGA GCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTATGGACGGTA ATGGCGTTGGTTTAAGTG Transcript length: 402 Transcript exons: 22024210-22024396,22025764-22025918,22026554-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCGGAAA AAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTTTTCCG ACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATGAAGCC ATGAGCCAATCACACATCAGGTCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTATGGACGGTA ATGGCGTTGGTTTAAGTG Transcript length: 403 Transcript exons: 22024210-22024395,22025766-22025918,22026550-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGAAAAAA GAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTTTTCCGACG ACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATGAAGCCATG AGCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTATGGACGGT AATGGCGTTGGTTTAAGTG Transcript length: 411 Transcript exons: 22024210-22024316,22025214-22025321,22025759-22025918,22 026578-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCGTGGATCTCTGTATCTGATA CAGCATCTTCTCAGAGGTCGAACGCCCATTCGACCAAAGTGCGGATCATAATGGGAAGGCAAGT ACATGAACAGGCCAAGATGGGGTCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGC CTCACCTGCTGATCCTCTGGGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAG AGGGCTCAGCGCCTGCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTCGGCGATTA TGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 411 Transcript exons: 22024210-22024399,22025758-22025918,22026554-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCGC TGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCT CGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCC AATGAAGCCATGAGCCAATCACACATCAGGTCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTA TGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 411 Transcript exons: 22024210-22024401,22025764-22025918,22026550-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCAG GGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTGGGGCTCGTT TTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAACATCCAATG AAGCCATGAGCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGGCATCGGCGGCGATTA TGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 417 Transcript exons: 22024210-22024396,22025749-22025918,22026554-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCGAAAC AGATGCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCT GGGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAA ACATCCAATGAAGCCATGAGCCAATCACACATCAGGTCTTGCAGCAGCAGCAGGGCATCGGCGG CGATTATGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 420 Transcript exons: 22024210-22024395,22025749-22025918,22026550-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGGAAACA GATGCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGATCCTCTG GGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCCTGCAAA CATCCAATGAAGCCATGAGCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGGCATCGG CGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG Transcript length: 554 Transcript exons: 22024210-22024400,22025188-22025321,22025754-22025918,22 026550-22026613 GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCAC AGCAATCAATGAACCACACAAATGTCGTGGATCTCTGTATCTGATACAGCATCTTCTCAGAGGT CGAACGCCCATTCGACCAAAGTGCGGATCATAATGGGAAGGCAAGTACATGAACAGGCCAAGAT GGGGTAGATGCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCTGAT CCTCTGGGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGCGCC TGCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTCAGGCTTGCAGCAGCAGCAGGG CATCGGCGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG
Genomic sequence	GTGAGGAGTTGCCATCGGCGAAAGGAAAGGGCAAGGAAAAAGCTCTCTGAATGTCACATCGACA TATCAGCCAAGATCCCAACCAAAAAGGACATCAGATACTGCCTCATTATGCTTTTTGTACAAGG ATACAAGGATTGGTTCTTCCTCCCTCCTCTCATCAATCAAAGGCCAAGAAGAACCAAGCTCCAG GTTAGAATCTCAAAGCAAACAATCTACCTAAAACTTCCATCATCATCATCATCATCTGTTGTAA CATTAACCTCCTCTCCATGCTGCTCTTTCAGTGCAGAAAGCTATCGCAAACAAGAAAGAGCTTT GCCAGTTGCAGCCTGCCTTTGCATTTGGACTGCACCGGTTGCTTCATTCGTCAAGCACACCACA GGTTGAGGAAGCAGCCGTTTGACCATCTGTGCAGCAGCTCACCCAGGCACAGGATGGCGTACAC CAGCAGGATGAACTTGAAGAGGAAAGGGAAGTAATGTGACAGCTCGACGCTCGACGAGTGCAGG ACCTGAAAGAGAAAACGCAGCGGCAAGCAAATTGAGGCGATGGTTCTCTTTCTTGTAAAACTCT CCGATGGCAACAGGTGACGACAATGCAGGTGGTTGAGTATAGCATATGCAGTGCATGAGGGGGG GACTTGCCATGGCAACTCCAGCGAAGTGCGCCCGACGCCGGGACGGCGGCGGCGGCGGCGACGC GGCGGTGGCGTCGACGACGACGTGGTCCGATGGCAGCAGCAGCAGCGGCGGCTTGCCGTCGCTC CCGGCGTCGCAGCACTGCGTGTTCGCCGGCGAGCAGTTCCTGAGACGCTGTACGTCCTTGCTTT GAAGAGGCTTTACGATGAAATCTTCAGCACCAGCATTCATGCATCTGTGTTTAGAAAAAGATTT TTTTTAAGAAAAAAAATCTTCTTATACTGCAGGATCACAGCAGTACTAGTACAGTACTAACAGG ATATCAGAGATCACGAGACAGCAATCAATGAACCACACAAATGTCGTGGATCTCTGTATCTGAT ACAGCATCTTCTCAGAGGTCGAACGCCCATTCGACCAAAGTGCGGATCATAATGGGAAGGCAAG TACATGAACAGGCCAAGATGGGGTATTTACTGAAGCATTATTATTTCTCTTCCACTTCCTCGGT TATATTTTAAATGCAACTATAAATTTTCGTGTCTAACTTTGATCGTTCGTCTTATTTAAAAATT TGTTATAATTAGTATTTTTGTTGTTATGAGATGATAAAACATGAATGGTACTTTATGCATGACT TATGTTTTTAAATTTTTTTAATTTTTTTTTAAATAAGACAGATGATTAAAGTTGAGTATGAAAA AGTATGGCTACACTTAAAATACGATAGAGGGAGTACAAATCTATGAAGCTTTTTAAATGGATGG ATGTATATAGCCATACGTATGTACAGTTCGCTACTCAGTTGTACACTCGGTACAGTGTACTCCT ATTGTGCAGCAGGCAGAGGTATTGGGACCAAATTAAGACAGCTCCCCTTTTTTTTTTTACTTGC ACAGAAACAGATGCTGAAGGAAAAAAGAAAGAAAAAGGATGAAAGCCTCTCTGCCTCACCTGCT GATCCTCTGGGGCTCGTTTTCCGACGACATGACGATCACTGGGATCGGCTTCAGAGGGCTCAGC GCCTGCAAACATCCAATGAAGCCATGAGCCAATCACACATCAGGTTATTACTGGAACTAATCAC TACTACTGCTAATTAGTACTAGGGACACCAAAATAGTAGTAGCAACAGCGCAAGTCTGAATTTC TGCATTAACAGTATTTGTATTTATTTTACCTTGATGGCTTTGAGAAGCTCATAACCAGTCATCT CAGGCATGCAGTAGTCGGTGAGCACCATGTCGATGGCCTGCTCCTGCACATGATATTAAAAAGA GTTTATTTAGCCATCCAATCACATCCTGGTTAGCTGTAATTACACCCAGCCGTGTCACTACCAC TCCTGTGTTGAGCTCACAGGGCACACCAAGAATCAAACCCATGCCATTAACCAATCCCATTAAC CCAAGCTTGGTGTCATCAAGACACCAGACAGCTCTGTCAGGCTGCTGTAAGACGGCGAGTTTTT CTCTCTTTTTTAGTAGTATTTTTTTTCTTCTTCCTCTGCATGTCTCTCTCCCCCATGAAAAGAG GCCACCTTTTGCTCCCAAAAGGCGGAGACGAGGAGGAACAGAAACCCTCACGCGCGCACGCGCG CCGTACGGCCGGCGTACGGCCGGCGGTGCAGCGCCGCCGGCGAGAGGAGGAAAACAAAAATGGC GTCGCCATTTGTTAATGATCTGATCCTCGTTTCTTGCAGGCTTGCAGCAGCAGCAGGGCATCGG CGGCGATTATGGACGGTAATGGCGTTGGTTTAAGTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_005489* osi_circ_014403 osi_circ_014402 						
					
						PMCS
						0.702687537

Conservation Information
Conserved circRNAs	osi_circ_005489* osi_circ_014403 osi_circ_014402
PMCS	0.702687537

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015

circRNA

Detail information of Os04g0442300_circ_g.4

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