Plant Circular RNA Database

Detail information of Os03g0596900_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os03g0596900_circ_g.6
					
						ID in PlantcircBase
						osa_circ_020593
					
						Alias
						Os03circ19602/Os_ciR2955
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 22221160-22223794  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os03g0596900						
					
						Parent gene annotation
						
							GTP-binding signal recognition particle SRP54, G-domain containi
ng protein. (Os03t0596900-01);Hypothetical conserved gene. (Os03
t0596900-02);Hypothetical conserved gene. (Os03t0596900-03)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os03g0596900_circ_g.1 Os03g0596900_circ_g.2 Os03g0596900_circ_g.3 Os03g0596900_circ_g.4 Os03g0596900_circ_g.5 Os03g0596900_circ_g.7 Os03g0596900_circ_g.8 Os03g0596900_circ_g.9 Os03g0596900_circ_g.10 Os03g0596900_circ_g.11 Os03g0596900_circ_g.12 Os03g0596900_circ_g.13 Os03g0596900_circ_g.14 Os03g0596900_circ_g.15 Os03g0596900_circ_g.16 Os03g0596900_circ_g.17 Os03g0596900_circ_g.18 Os03g0596900_circ_g.19 						
					
						Support reads
						4/4/1
					
						Tissues
						leaf and panicle/root/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0596900-02:7
Os03t0596900-03:2
Os03t0596900-01:7

General Information
CircRNA Name	Os03g0596900_circ_g.6
ID in PlantcircBase	osa_circ_020593
Alias	Os03circ19602/Os_ciR2955
Organism	Oryza sativa
Position	chr3: 22221160-22223794 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer, SMALT, Segemehl, find_circ
Parent gene	Os03g0596900
Parent gene annotation	GTP-binding signal recognition particle SRP54, G-domain containi ng protein. (Os03t0596900-01);Hypothetical conserved gene. (Os03 t0596900-02);Hypothetical conserved gene. (Os03t0596900-03)
Parent gene strand	-
Alternative splicing	Os03g0596900_circ_g.1 Os03g0596900_circ_g.2 Os03g0596900_circ_g.3 Os03g0596900_circ_g.4 Os03g0596900_circ_g.5 Os03g0596900_circ_g.7 Os03g0596900_circ_g.8 Os03g0596900_circ_g.9 Os03g0596900_circ_g.10 Os03g0596900_circ_g.11 Os03g0596900_circ_g.12 Os03g0596900_circ_g.13 Os03g0596900_circ_g.14 Os03g0596900_circ_g.15 Os03g0596900_circ_g.16 Os03g0596900_circ_g.17 Os03g0596900_circ_g.18 Os03g0596900_circ_g.19
Support reads	4/4/1
Tissues	leaf and panicle/root/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0596900-02:7 Os03t0596900-03:2 Os03t0596900-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATTCTCATATGCCATATTTTACCTTGCCTTTCCTGCCAAAAAGAACATTGTGAAGAAACTTAA
GATCAGCAGGTTTTTTCCTTGATATTCTGTGCGCCAcgtgttgaaatcaacttttttaaggatt
tcagttatggttttcctcagctcgtccttactgggtagacctacttctgctgattctcctttac
cctttgtc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 876
Transcript exons: 22221160-22221269,22221815-22222202,22222444-22222496,22
222641-22222719,22222839-22222949,22223056-22223111,2222
3716-22223794
CGTGTTGAAATCAACTTTTTTAAGGATTTCAGTTATGGTTTTCCTCAGCTCGTCCTTACTGGGT
AGACCTACTTCTGCTGATTCTCCTTTACCCTTTGTCACCTTTTTACCTGATGACTTCTTGTCTT
TTATCTCCTTTTCAGAGCTTGAAGGACGCTTTGGTGTGACAGATTTCTTCTTCCTAGAGAAGAC
TTTTGCACTGTCCTCAGGGCTCTCCTTTTCCTTGGAAACTTTTGAAGATGGTGTTTTGCTTGAA
CTCTTGCTCACTGTCCTTGGAGTACCTGTCTTGTGGCTGCTCCCTGTTGCAGCCTTCTTTTTAC
TAGCGGTATCTTTTGCATCTGAGGAGTTCTTCTTTGCCTTCTCTTTCTCAGAATCATAGTCATC
TTCCTCACTATCTGACTTCATGGGATCCGCATCATCCTCATCTTCATCAGTATCATATTCCAGA
GCTTTATTCCGCTTTTTACTTGGAGTTATGTCGTCATCATCATCAAATTTCTTGCTAGAACTCT
TGGGTGTGCTTCCTCTCTTGCGTTTCCGAGAATTCGACCCCTGATCATCCGAATGCCCGGAATC
AGCCATAGCATGAGGTTCAGCAATGAAATCCAACAGCTTTGCCACAATATCTTCCTTTCTGATG
TTTGCTTTTGGAGTCGGAATAGCAAGGATCCAACAGAGTTCCAACAACATGTCTTTCACACATT
TGTCAAGCTTCTCCTTAGCCTTCGCCCTCTGCTTTTCATCACTTTCATGCCACACGAAACCAGA
GAACTGGAGTATATGACCTTTAAAATCAAACCTTGCCTTTCCTGCCAAAAAGAACATTGTGAAG
AAACTTAAGATCAGCAGGTTTTTTCCTTGATATTCTGTGCGCCA
Transcript length: 878
Transcript exons: 22221160-22221269,22221815-22222202,22222444-22222496,22
222641-22222719,22222839-22222949,22223056-22223115,2222
3718-22223794
CGTGTTGAAATCAACTTTTTTAAGGATTTCAGTTATGGTTTTCCTCAGCTCGTCCTTACTGGGT
AGACCTACTTCTGCTGATTCTCCTTTACCCTTTGTCACCTTTTTACCTGATGACTTCTTGTCTT
TTATCTCCTTTTCAGAGCTTGAAGGACGCTTTGGTGTGACAGATTTCTTCTTCCTAGAGAAGAC
TTTTGCACTGTCCTCAGGGCTCTCCTTTTCCTTGGAAACTTTTGAAGATGGTGTTTTGCTTGAA
CTCTTGCTCACTGTCCTTGGAGTACCTGTCTTGTGGCTGCTCCCTGTTGCAGCCTTCTTTTTAC
TAGCGGTATCTTTTGCATCTGAGGAGTTCTTCTTTGCCTTCTCTTTCTCAGAATCATAGTCATC
TTCCTCACTATCTGACTTCATGGGATCCGCATCATCCTCATCTTCATCAGTATCATATTCCAGA
GCTTTATTCCGCTTTTTACTTGGAGTTATGTCGTCATCATCATCAAATTTCTTGCTAGAACTCT
TGGGTGTGCTTCCTCTCTTGCGTTTCCGAGAATTCGACCCCTGATCATCCGAATGCCCGGAATC
AGCCATAGCATGAGGTTCAGCAATGAAATCCAACAGCTTTGCCACAATATCTTCCTTTCTGATG
TTTGCTTTTGGAGTCGGAATAGCAAGGATCCAACAGAGTTCCAACAACATGTCTTTCACACATT
TGTCAAGCTTCTCCTTAGCCTTCGCCCTCTGCTTTTCATCACTTTCATGCCACACGAAACCAGA
GAACTGGAGTATATGACCTTTAAAATCAACAGTCTTGCCTTTCCTGCCAAAAAGAACATTGTGA
AGAAACTTAAGATCAGCAGGTTTTTTCCTTGATATTCTGTGCGCCA
						
					

						Genomic sequence
						
							CGTGTTGAAATCAACTTTTTTAAGGATTTCAGTTATGGTTTTCCTCAGCTCGTCCTTACTGGGT
AGACCTACTTCTGCTGATTCTCCTTTACCCTTTGTCACCTTTTTACCTTCAGGAATCAGAATGA
TATGATTAGTTGACTGAGTTGAGACCACACTCCCAATGACATTTAAATAATAAAAATGGAAGGT
ATCATGTAACTATGCGATAGGAATAACTTAATATCCACAGAAAGAACAAGTAATGACACAGCAA
ATGATTCATCACTGCACTTGTCCATCAAGTATATGCTTTAGTAGACAAAAATTTATCATAATAA
TGTAAATTCCAAATCAACAAATGCTGTGAGAATTTAGCACAAGCAGAAAAGCAAAATAAACTGC
AAATTATAAATATGAACCCCAAATATAAGCTGCAGCGCAAGTTTCATTCAGCTAGATTTGAGAC
ACCTGAGAACCAAACAAAACAACAGAGAAAATGGAATTCTACTAGCATGTTACAACTAGGAAAA
TAGTCTAATCTCCATGGGGGAAATAGAAATATGTTGATAACAATTACCAAACATCAAAGAAATG
GGAAGATTTCGAGTATTATACAGTGCTGCATGTAAACTAATATAGTATGATGCTACTACAGTTT
AAGGACAAAAATTACCTGATGACTTCTTGTCTTTTATCTCCTTTTCAGAGCTTGAAGGACGCTT
TGGTGTGACAGATTTCTTCTTCCTAGAGAAGACTTTTGCACTGTCCTCAGGGCTCTCCTTTTCC
TTGGAAACTTTTGAAGATGGTGTTTTGCTTGAACTCTTGCTCACTGTCCTTGGAGTACCTGTCT
TGTGGCTGCTCCCTGTTGCAGCCTTCTTTTTACTAGCGGTATCTTTTGCATCTGAGGAGTTCTT
CTTTGCCTTCTCTTTCTCAGAATCATAGTCATCTTCCTCACTATCTGACTTCATGGGATCCGCA
TCATCCTCATCTTCATCAGTATCATATTCCAGAGCTTTATTCCGCTTTTTACTTGGAGTTATGT
CGTCATCATCATCAAATTTCTGAAACACCGACAATGCAAACAAGGTTACAAGAATAAATAACCA
CAATCATTAATGTGTCAACACAATAGATCATCACATGTACATCTTGGAAGAGACTAGCAAAACT
TCAGTAGTTCAGTTATATAATCAGCAAAAAGACACATGCTGATAAAGATTGCATATATTAATAA
GTCACATTAAAAAATTCCAATTAAAAAATACTGTCAACAGGTTGGATCTGACAAACTTGGCACC
ATACCTTGCTAGAACTCTTGGGTGTGCTTCCTCTCTTGCGTTTCCGAGAATTCGACCCCTAGAA
AGCAGAAGAAAGTAGAGCACAGAGAAAAATATGGTAAATTCCCAATCATTCAAGAACTAATAGC
AACTGTAAGTGGCGGTGAATATAAACACCCAGACAGGAATATTAACAAAACAAGTTATCACATC
TTGATCTTGCCTGATCATCCGAATGCCCGGAATCAGCCATAGCATGAGGTTCAGCAATGAAATC
CAACAGCTTTGCCACAATATCTTCCTACATGAGTTATGAACTATATTAGCGACTAGCAAATCAC
TATTCAATAAGGTCTTGAATTCCATCTCTGTTCTAACAAAAAAAACACATTTGGGAAGGGGGAA
CAAGACATTATATACCTTTCTGATGTTTGCTTTTGGAGTCGGAATAGCAAGGATCCAACAGAGT
TCCAACAACATGTCTTTCACACATTTGTCAAGCTTCTCCTTAGCCTTCGCCCTCTGCTTTTCCT
ACAAATAGATAATAATAGGGCTCTTTAAGTATTAAACAATTACTGTCAGCTAAATATAATTGAG
TTAAATTCATTAAAAATTTGGATGTATTGAAGAAGCTTACATCACTTTCATGCCACACGAAACC
AGAGAACTGGAGTATATGACCTTTAAAATCAACAGTCTGGTACATTACACAAACAGTATTTGTC
AGTATCATACACAACAGTTTTGCTTAAGCAATCCAAACCAATAACTGGCAATCTTATGGTCACC
TAAAAGGTCAAAAACTTAAGATGTCCATCACAAACGGAAAATGAATTTATAGTTGAATAGTATC
CTGCCTACGCAGCTTCTATGGTATTTTGATAACCCAATATTGGCTGCAAGGCTTTACACACTGA
GAAATTCCTCTTCTTTTTTTTTTCTTTTACTACCATTTGTAACTTGAAAGTTGAAACAGCATGC
TAAAAAGTTAGGGTTGTGTTATTTTAGGGCTTCTGGTTCACTTCTTTTGATACAAAACAGCATA
TGCACTGGAGTCAAAACATAGTGGTGTACCAGTATTGCATATACACCATGCCATTTTAAATTCA
TTCTTCAGTGCTGGTTAAGTTATATTAAAACCTATTAAGGGAATCACATACTTCTAATGAAGTT
GAGTACATAAGTTTGCTTGAACACTTTTAATTCAACTGGAATGGACACTGTTTAGGTGCTAAAA
GCTAGTATAGACATCCTGCATCAGCTATGTCAAAAGAAACATTCTCATATGCCATATTTTACCT
TGCCTTTCCTGCCAAAAAGAACATTGTGAAGAAACTTAAGATCAGCAGGTTTTTTCCTTGATAT
TCTGTGCGCCA
						
					

			
		

Sequences
Splice junction sequence	CATTCTCATATGCCATATTTTACCTTGCCTTTCCTGCCAAAAAGAACATTGTGAAGAAACTTAA GATCAGCAGGTTTTTTCCTTGATATTCTGTGCGCCAcgtgttgaaatcaacttttttaaggatt tcagttatggttttcctcagctcgtccttactgggtagacctacttctgctgattctcctttac cctttgtc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 876 Transcript exons: 22221160-22221269,22221815-22222202,22222444-22222496,22 222641-22222719,22222839-22222949,22223056-22223111,2222 3716-22223794 CGTGTTGAAATCAACTTTTTTAAGGATTTCAGTTATGGTTTTCCTCAGCTCGTCCTTACTGGGT AGACCTACTTCTGCTGATTCTCCTTTACCCTTTGTCACCTTTTTACCTGATGACTTCTTGTCTT TTATCTCCTTTTCAGAGCTTGAAGGACGCTTTGGTGTGACAGATTTCTTCTTCCTAGAGAAGAC TTTTGCACTGTCCTCAGGGCTCTCCTTTTCCTTGGAAACTTTTGAAGATGGTGTTTTGCTTGAA CTCTTGCTCACTGTCCTTGGAGTACCTGTCTTGTGGCTGCTCCCTGTTGCAGCCTTCTTTTTAC TAGCGGTATCTTTTGCATCTGAGGAGTTCTTCTTTGCCTTCTCTTTCTCAGAATCATAGTCATC TTCCTCACTATCTGACTTCATGGGATCCGCATCATCCTCATCTTCATCAGTATCATATTCCAGA GCTTTATTCCGCTTTTTACTTGGAGTTATGTCGTCATCATCATCAAATTTCTTGCTAGAACTCT TGGGTGTGCTTCCTCTCTTGCGTTTCCGAGAATTCGACCCCTGATCATCCGAATGCCCGGAATC AGCCATAGCATGAGGTTCAGCAATGAAATCCAACAGCTTTGCCACAATATCTTCCTTTCTGATG TTTGCTTTTGGAGTCGGAATAGCAAGGATCCAACAGAGTTCCAACAACATGTCTTTCACACATT TGTCAAGCTTCTCCTTAGCCTTCGCCCTCTGCTTTTCATCACTTTCATGCCACACGAAACCAGA GAACTGGAGTATATGACCTTTAAAATCAAACCTTGCCTTTCCTGCCAAAAAGAACATTGTGAAG AAACTTAAGATCAGCAGGTTTTTTCCTTGATATTCTGTGCGCCA Transcript length: 878 Transcript exons: 22221160-22221269,22221815-22222202,22222444-22222496,22 222641-22222719,22222839-22222949,22223056-22223115,2222 3718-22223794 CGTGTTGAAATCAACTTTTTTAAGGATTTCAGTTATGGTTTTCCTCAGCTCGTCCTTACTGGGT AGACCTACTTCTGCTGATTCTCCTTTACCCTTTGTCACCTTTTTACCTGATGACTTCTTGTCTT TTATCTCCTTTTCAGAGCTTGAAGGACGCTTTGGTGTGACAGATTTCTTCTTCCTAGAGAAGAC TTTTGCACTGTCCTCAGGGCTCTCCTTTTCCTTGGAAACTTTTGAAGATGGTGTTTTGCTTGAA CTCTTGCTCACTGTCCTTGGAGTACCTGTCTTGTGGCTGCTCCCTGTTGCAGCCTTCTTTTTAC TAGCGGTATCTTTTGCATCTGAGGAGTTCTTCTTTGCCTTCTCTTTCTCAGAATCATAGTCATC TTCCTCACTATCTGACTTCATGGGATCCGCATCATCCTCATCTTCATCAGTATCATATTCCAGA GCTTTATTCCGCTTTTTACTTGGAGTTATGTCGTCATCATCATCAAATTTCTTGCTAGAACTCT TGGGTGTGCTTCCTCTCTTGCGTTTCCGAGAATTCGACCCCTGATCATCCGAATGCCCGGAATC AGCCATAGCATGAGGTTCAGCAATGAAATCCAACAGCTTTGCCACAATATCTTCCTTTCTGATG TTTGCTTTTGGAGTCGGAATAGCAAGGATCCAACAGAGTTCCAACAACATGTCTTTCACACATT TGTCAAGCTTCTCCTTAGCCTTCGCCCTCTGCTTTTCATCACTTTCATGCCACACGAAACCAGA GAACTGGAGTATATGACCTTTAAAATCAACAGTCTTGCCTTTCCTGCCAAAAAGAACATTGTGA AGAAACTTAAGATCAGCAGGTTTTTTCCTTGATATTCTGTGCGCCA
Genomic sequence	CGTGTTGAAATCAACTTTTTTAAGGATTTCAGTTATGGTTTTCCTCAGCTCGTCCTTACTGGGT AGACCTACTTCTGCTGATTCTCCTTTACCCTTTGTCACCTTTTTACCTTCAGGAATCAGAATGA TATGATTAGTTGACTGAGTTGAGACCACACTCCCAATGACATTTAAATAATAAAAATGGAAGGT ATCATGTAACTATGCGATAGGAATAACTTAATATCCACAGAAAGAACAAGTAATGACACAGCAA ATGATTCATCACTGCACTTGTCCATCAAGTATATGCTTTAGTAGACAAAAATTTATCATAATAA TGTAAATTCCAAATCAACAAATGCTGTGAGAATTTAGCACAAGCAGAAAAGCAAAATAAACTGC AAATTATAAATATGAACCCCAAATATAAGCTGCAGCGCAAGTTTCATTCAGCTAGATTTGAGAC ACCTGAGAACCAAACAAAACAACAGAGAAAATGGAATTCTACTAGCATGTTACAACTAGGAAAA TAGTCTAATCTCCATGGGGGAAATAGAAATATGTTGATAACAATTACCAAACATCAAAGAAATG GGAAGATTTCGAGTATTATACAGTGCTGCATGTAAACTAATATAGTATGATGCTACTACAGTTT AAGGACAAAAATTACCTGATGACTTCTTGTCTTTTATCTCCTTTTCAGAGCTTGAAGGACGCTT TGGTGTGACAGATTTCTTCTTCCTAGAGAAGACTTTTGCACTGTCCTCAGGGCTCTCCTTTTCC TTGGAAACTTTTGAAGATGGTGTTTTGCTTGAACTCTTGCTCACTGTCCTTGGAGTACCTGTCT TGTGGCTGCTCCCTGTTGCAGCCTTCTTTTTACTAGCGGTATCTTTTGCATCTGAGGAGTTCTT CTTTGCCTTCTCTTTCTCAGAATCATAGTCATCTTCCTCACTATCTGACTTCATGGGATCCGCA TCATCCTCATCTTCATCAGTATCATATTCCAGAGCTTTATTCCGCTTTTTACTTGGAGTTATGT CGTCATCATCATCAAATTTCTGAAACACCGACAATGCAAACAAGGTTACAAGAATAAATAACCA CAATCATTAATGTGTCAACACAATAGATCATCACATGTACATCTTGGAAGAGACTAGCAAAACT TCAGTAGTTCAGTTATATAATCAGCAAAAAGACACATGCTGATAAAGATTGCATATATTAATAA GTCACATTAAAAAATTCCAATTAAAAAATACTGTCAACAGGTTGGATCTGACAAACTTGGCACC ATACCTTGCTAGAACTCTTGGGTGTGCTTCCTCTCTTGCGTTTCCGAGAATTCGACCCCTAGAA AGCAGAAGAAAGTAGAGCACAGAGAAAAATATGGTAAATTCCCAATCATTCAAGAACTAATAGC AACTGTAAGTGGCGGTGAATATAAACACCCAGACAGGAATATTAACAAAACAAGTTATCACATC TTGATCTTGCCTGATCATCCGAATGCCCGGAATCAGCCATAGCATGAGGTTCAGCAATGAAATC CAACAGCTTTGCCACAATATCTTCCTACATGAGTTATGAACTATATTAGCGACTAGCAAATCAC TATTCAATAAGGTCTTGAATTCCATCTCTGTTCTAACAAAAAAAACACATTTGGGAAGGGGGAA CAAGACATTATATACCTTTCTGATGTTTGCTTTTGGAGTCGGAATAGCAAGGATCCAACAGAGT TCCAACAACATGTCTTTCACACATTTGTCAAGCTTCTCCTTAGCCTTCGCCCTCTGCTTTTCCT ACAAATAGATAATAATAGGGCTCTTTAAGTATTAAACAATTACTGTCAGCTAAATATAATTGAG TTAAATTCATTAAAAATTTGGATGTATTGAAGAAGCTTACATCACTTTCATGCCACACGAAACC AGAGAACTGGAGTATATGACCTTTAAAATCAACAGTCTGGTACATTACACAAACAGTATTTGTC AGTATCATACACAACAGTTTTGCTTAAGCAATCCAAACCAATAACTGGCAATCTTATGGTCACC TAAAAGGTCAAAAACTTAAGATGTCCATCACAAACGGAAAATGAATTTATAGTTGAATAGTATC CTGCCTACGCAGCTTCTATGGTATTTTGATAACCCAATATTGGCTGCAAGGCTTTACACACTGA GAAATTCCTCTTCTTTTTTTTTTCTTTTACTACCATTTGTAACTTGAAAGTTGAAACAGCATGC TAAAAAGTTAGGGTTGTGTTATTTTAGGGCTTCTGGTTCACTTCTTTTGATACAAAACAGCATA TGCACTGGAGTCAAAACATAGTGGTGTACCAGTATTGCATATACACCATGCCATTTTAAATTCA TTCTTCAGTGCTGGTTAAGTTATATTAAAACCTATTAAGGGAATCACATACTTCTAATGAAGTT GAGTACATAAGTTTGCTTGAACACTTTTAATTCAACTGGAATGGACACTGTTTAGGTGCTAAAA GCTAGTATAGACATCCTGCATCAGCTATGTCAAAAGAAACATTCTCATATGCCATATTTTACCT TGCCTTTCCTGCCAAAAAGAACATTGTGAAGAAACTTAAGATCAGCAGGTTTTTTCCTTGATAT TCTGTGCGCCA

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_004949* osi_circ_013272 						
					
						PMCS
						0.214671382

Conservation Information
Conserved circRNAs	osi_circ_004949* osi_circ_013272
PMCS	0.214671382

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							22223745-22221162(-)
						
						Potential amino acid sequence
						
							MFFLAGKARFDFKGHILQFSGFVWHESDEKQRAKAKEKLDKCVKDMLLELCWILAIPTPKANIR
KEDIVAKLLDFIAEPHAMADSGHSDDQGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALE
YDTDEDEDDADPMKSDSEEDDYDSEKEKAKKNSSDAKDTASKKKAATGSSHKTGTPRTVSKSSS
KTPSSKVSKEKESPEDSAKVFSRKKKSVTPKRPSSSEKEIKDKKSSGKKVTKGKGESAEVGLPS
KDELRKTITEILKKVDFNTWRTEYQGKNLLILSFFTMFFLAGKARFDFKGHILQFSGFVWHESD
EKQRAKAKEKLDKCVKDMLLELCWILAIPTPKANIRKEDIVAKLLDFIAEPHAMADSGHSDDQG
SNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEEDDYDSEKEK
AKKNSSDAKDTASKKKAATGSSHKTGTPRTVSKSSSKTPSSKVSKEKESPEDSAKVFSRKKKSV
TPKRPSSSEKEIKDKKSSGKKVTKGKGESAEVGLPSKDELRKTITEILKKVDFNTWRTEYQGKN
LLILSFFTMFFLAGKARFDFKGHILQFSGFVWHESDEKQRAKAKEKLDKCVKDMLLELCWILAI
PTPKANIRKEDIVAKLLDFIAEPHAMADSGHSDDQGSNSRKRKRGSTPKSSSKKFDDDDDITPS
KKRNKALEYDTDEDEDDADPMKSDSEEDDYDSEKEKAKKNSSDAKDTASKKKAATGSSHKTGTP
RTVSKSSSKTPSSKVSKEKESPEDSAKVFSRKKKSVTPKRPSSSEKEIKDKKSSGKKVTKGKGE
SAEVGLPSKDELRKTITEILKKVDFNTWRTEYQGKNLLILSFFTMFFLAGKARFDFKGHILQFS
GFVWHESDEKQRAKAKEKLDKCVKDMLLELCWILAIPTPKANIRKEDIVAKLLDFIAEPHAMAD
SGHSDDQGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEED
DYDSEKEKAKKNSSDAKDTASKKKAATGSSHKTGTPRTVSKSSSKTPSSKVSKEKESPEDSAKV
FSRKKKSVTPKRPSSSEKEIKDKKSSGKKVTKGKGESAEVGLPSKDELRKTITEILKKVDFNT(
-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	22223745-22221162(-)
Potential amino acid sequence	MFFLAGKARFDFKGHILQFSGFVWHESDEKQRAKAKEKLDKCVKDMLLELCWILAIPTPKANIR KEDIVAKLLDFIAEPHAMADSGHSDDQGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALE YDTDEDEDDADPMKSDSEEDDYDSEKEKAKKNSSDAKDTASKKKAATGSSHKTGTPRTVSKSSS KTPSSKVSKEKESPEDSAKVFSRKKKSVTPKRPSSSEKEIKDKKSSGKKVTKGKGESAEVGLPS KDELRKTITEILKKVDFNTWRTEYQGKNLLILSFFTMFFLAGKARFDFKGHILQFSGFVWHESD EKQRAKAKEKLDKCVKDMLLELCWILAIPTPKANIRKEDIVAKLLDFIAEPHAMADSGHSDDQG SNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEEDDYDSEKEK AKKNSSDAKDTASKKKAATGSSHKTGTPRTVSKSSSKTPSSKVSKEKESPEDSAKVFSRKKKSV TPKRPSSSEKEIKDKKSSGKKVTKGKGESAEVGLPSKDELRKTITEILKKVDFNTWRTEYQGKN LLILSFFTMFFLAGKARFDFKGHILQFSGFVWHESDEKQRAKAKEKLDKCVKDMLLELCWILAI PTPKANIRKEDIVAKLLDFIAEPHAMADSGHSDDQGSNSRKRKRGSTPKSSSKKFDDDDDITPS KKRNKALEYDTDEDEDDADPMKSDSEEDDYDSEKEKAKKNSSDAKDTASKKKAATGSSHKTGTP RTVSKSSSKTPSSKVSKEKESPEDSAKVFSRKKKSVTPKRPSSSEKEIKDKKSSGKKVTKGKGE SAEVGLPSKDELRKTITEILKKVDFNTWRTEYQGKNLLILSFFTMFFLAGKARFDFKGHILQFS GFVWHESDEKQRAKAKEKLDKCVKDMLLELCWILAIPTPKANIRKEDIVAKLLDFIAEPHAMAD SGHSDDQGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEED DYDSEKEKAKKNSSDAKDTASKKKAATGSSHKTGTPRTVSKSSSKTPSSKVSKEKESPEDSAKV FSRKKKSVTPKRPSSSEKEIKDKKSSGKKVTKGKGESAEVGLPSKDELRKTITEILKKVDFNT( -)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os03g0596900_circ_g.6

Address

Any questions?

Supported by