Splice junction sequence |
GGGCATCCACTGATTACGCAACCAACACCGCCTCCATGAGACTCTCCATAAGTTGCAACCTGGA AGTAGTTCCCAAATACATTTGCAGACGCCTTCACCTcccaatagtcgcggttggcttgaaagct actttgaagtatataatttcaccatttgatatccctccctgcatggacatacacattataaata ctaagaca
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 941 Transcript exons: 8178732-8178797,8178938-8179032,8179141-8179243,8179457- 8179588,8179677-8179757,8179959-8180051,8180208-8180291, 8180472-8180530,8180635-8180711,8180869-8181019 CCCAATAGTCGCGGTTGGCTTGAAAGCTACTTTGAAGTATATAATTTCACCATTTGATATCCCT CCCTGCACACCGCCTGAACGATTAGTTCTTGTTCTCACATTTCCAGCCTCATCCATATAGAACT CATCATTATGCTCACTTCCAGTGTAGTCAGTACCTGCAAATCCACTGCCGATCTCAAACCCCTT GCTTGCAGGAAGAGAAAGCATAGCTTTCGCCAATTCAGCCTCAAGTTTGTCAAATACAGGAGAG CCAATCCCACGAGGAACATTTCTTGCAATGCATGTGACCACACCACCAATCGAATCACCTCTAA CTCGTACTTTATCGATTGCATCAATCATCTTCTGTGCATATTCTGGATCAGGACATCTAACAAT GTTGCTTTCTATCTGTTCCATTGTTACAGTGTCATAATCAACGGCATCTTCTGGTAGTACAACT TGATGCACCTTGGACACAAACGCCAAGATCTCTACTCCAGATTTGAGCTTAAGAATTTTCTTTG CAAGAGCTCCTGCAGCCACCCTTCCAATGGTCTCTCTTGCTGATGATCTTCCACCTCCCTGCAC TGCTCTAACACCGTATTTGAAGTCATAAGTTGCATCTGCATGTGAAGGTCTGTAGGCCTTAGCC ATTTCACTGTAATCACCCCCTCTCTGATCTGTGTTCGGGACAAAAACATGAATTGGTGTCCCAG TGGTCATTCCTTCATGTGTCCCTGAAAGAATTTTGCAAGTGTCAGTCTCCTTTCTTGGGGTGGT TATTCTGCTCTGGCCTGGCCGTCTCCGGTCGAGTTCTACTTGCATATCTGCTTCAGTAAGTGGG ATTCTGGGTGGGCATCCACTGATTACGCAACCAACACCGCCTCCATGAGACTCTCCATAAGTTG CAACCTGGAAGTAGTTCCCAAATACATTTGCAGACGCCTTCACCT
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Genomic sequence |
CCCAATAGTCGCGGTTGGCTTGAAAGCTACTTTGAAGTATATAATTTCACCATTTGATATCCCT CCCTGCATGGACATACACATTATAAATACTAAGACAACGGTGTTATACTATTTACTAGTATTTT TTTAATCTAGAATGCAGCTAGATGTAGCGAAAACAATAAATAATATAACTGTAAAACAACAGGG GACTAGGATAAAACCTGCACACCGCCTGAACGATTAGTTCTTGTTCTCACATTTCCAGCCTCAT CCATATAGAACTCATCATTATGCTCACTTCCAGTGTAGTCAGTACCTGGGCACAAGTTATTAGT TAGTATTGAGGCCAGTAGCAAAGTAGTTGGCATGCACAGCTATTTGCAAAAAATAAATCAACTA ATTATGTGCAGATTAATTCAATTACCTGCAAATCCACTGCCGATCTCAAACCCCTTGCTTGCAG GAAGAGAAAGCATAGCTTTCGCCAATTCAGCCTCAAGTTTGTCAAATACAGGAGAGCCAATCCC CTACAAATTGTCGTTGCTCTATCATATCAGTAGCTCAACAGAGAAAAAATATTTTTCTAATGAA TGATCAAGCTTCAATGTTCAAACAGATTTTGTGCAAATTCCAAAGCAGGGCGGTCATAAGCAGA GAGTGCAAACGATGAGCTTATTTAGTTTATTTTAGCTGGAGGACATATATCAAAATAAACATAA CTGCAGGGTTTAAATACTTACACGAGGAACATTTCTTGCAATGCATGTGACCACACCACCAATC GAATCACCTCTAACTCGTACTTTATCGATTGCATCAATCATCTTCTGTGCATATTCTGGATCAG GACATCTAACAATGTTGCTTTCTATCTGGAAAATAAAATAAATATAATATTCAGCAAATGCCTT CAGAGACTGTCCAGAAGTGTTAAACTTGAAAATGGTGGGAACCACAGACCTGTTCCATTGTTAC AGTGTCATAATCAACGGCATCTTCTGGTAGTACAACTTGATGCACCTTGGACACAAACGCCAAG ATCTGCAATTGAAAATATTTTGCTGCTATGAGACATTGGACAGAATTTGTTGCATGGCTTCAGC ATATTTAGGATGTATATTCGAATGCTGATTCATTTTTCTTCAGCGTCCAATTGTTCATGGATAA GTAAACATGTCAATTGCGATGCTTGATACAAATCTTGATCAGTTAAGAGTAAAAGGTTGCCAAG TAGGATCACACCTCTACTCCAGATTTGAGCTTAAGAATTTTCTTTGCAAGAGCTCCTGCAGCCA CCCTTCCAATGGTCTCTCTTGCTGATGATCTTCCACCTCCCTATCATTCGGTTGATAGAAGATG TTGGTTAGGCATTCAAGTAAGAGAAGTTTAGGTACCACAGTTTTAGACATTCAAATAAGAGAAG TTTAGGTACTACAGTTGATGGTTCAATGAATGGCTATATTACACATTATAAAACATGAAAAAAA GTACCTGCACTGCTCTAACACCGTATTTGAAGTCATAAGTTGCATCTGCATGTGAAGGTCTGTA GGCCTTAGCCATTTCACTGTAATCCTGTGGGAATGAATATGGTTATTTCCAGCTTTAATATGTT ACTCCCTCTGTCCCAAAATATAAGCATTTTTAGCTATGAATCTGGGCAATTGTGTGTCCAGATT CGTAGCCAAAAGTTGTTATATTTTGGGACGGAGGTAGTATTTCAATACATTAATGCGAAAAAAC TTAGGTACTTACACCCCCTCTCTGATCTGTGTTCGGGACAAAAACATGAATTGGTGTCCCAGTG GTCATTCCTGCAGAAAACCCATCAATGCTATCGTGAATATGAGACAAGCTAATACTCTAAATTC AAAAATATTTTTTCCAAGTTTATCCCATGTCCTGAAAGACACCATACCTTCATGTGTCCCTGAA AGAATTTTGCAAGTGTCAGTCTCCTTTCTTGGGGTGGTTATTCTGCTCTGGCCTGGCCGTCTGT GATAATCAAAATTTTATGTCAGTTAACATTATGGTGTAATGTAACATAACAATCATATTCTGCA AGAGGTTAGCAGGATTGCATTTGCATAATCCTGTTTTTGACAGAAGCCAGCTGTCAGCACAGAA ATAATGGATTTTTCAAGAGACAAACCTCCGGTCGAGTTCTACTTGCATATCTGCTTCAGTAAGT GGGATTCTGGGTGGGCATCCACTGATTACGCAACCAACACCGCCTCCATGAGACTCTCCATAAG TTGCAACCTGGAAGTAGTTCCCAAATACATTTGCAGACGCCTTCACCT |