Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d039165_circ_g.1 |
ID in PlantcircBase | zma_circ_009194 |
Alias | zma_circ_0002442 |
Organism | Zea mays |
Position | chr6: 171556201-171570929 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d039165 |
Parent gene annotation |
DNA damage-binding protein 1a |
Parent gene strand | - |
Alternative splicing | Zm00001d039165_circ_g.2 Zm00001d039165_circ_g.3 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d039165_T009:18 Zm00001d039165_T008:18 Zm00001d039165_T013:18 Zm00001d039165_T016:16 Zm00001d039165_T021:18 Zm00001d039165_T005:18 Zm00001d039165_T012:18 Zm00001d039165_T017:6 Zm00001d039165_T004:16 Zm00001d039165_T010:17 Zm00001d039165_T002:17 Zm00001d039165_T022:18 Zm00001d039165_T019:18 Zm00001d039165_T003:18 Zm00001d039165_T011:19 Zm00001d039165_T018:17 Zm00001d039165_T014:18 Zm00001d039165_T015:19 Zm00001d039165_T020:18 Zm00001d039165_T006:16 Zm00001d039165_T001:18 Zm00001d039165_T007:17 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.090524992 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |