Plant Circular RNA Database

Detail information of Os02g0816300_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os02g0816300_circ_g.6
					
						ID in PlantcircBase
						osa_circ_017148
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 34983752-34988189  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os02g0816300						
					
						Parent gene annotation
						
							Armadillo-type fold domain containing protein. (Os02t0816300-01)
;Hypothetical conserved gene. (Os02t0816300-02);Hypothetical con
served gene. (Os02t0816300-03)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os02g0816300_circ_g.1 Os02g0816300_circ_g.2 Os02g0816300_circ_g.3 Os02g0816300_circ_g.4 Os02g0816300_circ_g.5 Os02g0816300_circ_g.7 Os02g0816300_circ_g.8 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0816300-02:6
Os02t0816300-03:6
Os02t0816300-01:12

General Information
CircRNA Name	Os02g0816300_circ_g.6
ID in PlantcircBase	osa_circ_017148
Alias	NA
Organism	Oryza sativa
Position	chr2: 34983752-34988189 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os02g0816300
Parent gene annotation	Armadillo-type fold domain containing protein. (Os02t0816300-01) ;Hypothetical conserved gene. (Os02t0816300-02);Hypothetical con served gene. (Os02t0816300-03)
Parent gene strand	+
Alternative splicing	Os02g0816300_circ_g.1 Os02g0816300_circ_g.2 Os02g0816300_circ_g.3 Os02g0816300_circ_g.4 Os02g0816300_circ_g.5 Os02g0816300_circ_g.7 Os02g0816300_circ_g.8
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0816300-02:6 Os02t0816300-03:6 Os02t0816300-01:12

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGTATCTTAAGTGTTTAATCCAAATAAGCAGGCAATTGCTTCTCAGTTGGCCAACCAGGATGAA
AAAGTTCTTATTGTCAGCATCAACAGTTTGAGCAAGgcatgccatttgctaaatttcttatcaa
aagaactgctacgtgactttgaaccgtgcgctgaactgcttattccggtatgttgctaacctat
ttttacat

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GCATGCCATTTGCTAAATTTCTTATCAAAAGAACTGCTACGTGACTTTGAACCGTGCGCTGAAC
TGCTTATTCCGGTATGTTGCTAACCTATTTTTACATCTGTTGGAAGTTAACAGTATCATCCTGG
ATACTTCTAAAATGACCTCGTTACCATCTTATATTTGTAGGTCCTTCTTAAGAATGTTGTGATC
ACTATTCATGTAATTGCTGAGTCCTCGGATAATTGTATAAAAGAGGTAATATACCGAAGAAATT
TTGTTTTCCATTTGATTTCATCATTTTTATGTTCATTACTTCCAAATACAGATGCTGCGGAACT
GCAAAGTAGCTCGTATTCTACCAAAAATTATTGAATTTGCAAAGAATGATAAAAGTGCAGTTCT
CCGTGCCAGGTAAGAGAAACACAATATTATAGTATAGCTATAATCTTGGATGAATGATTAAAAA
GGCATTTGCTGTTGTAGGTGTTGTGAGTACGCAATATTGATGTTGGAGTTATGGGTTGATACTC
CAGAAATACAGAGATCAGTTGATCTGTATGAAGAATTCATAAAATGTTGTATAGAAGATGCAAC
TAGTGAGGTATTTATACGGCACGATTATTTGAAATGTATGAAAGGCACTTACACATTTCTTCCT
TATCTTTTCCATCCTCCTTTTACCTTTGCAGAAACTTTTTAGTGGATTTTCTTTGCGTTATATA
TCACATATATTTAGTTAAATGTACTGTACACCTCAAATGCATAACTACTAGCCATGAATTAAGT
ATCTTTTCGTTATTACCAAAAAAAATAAAAATACATACCACATTGCGATGACAAAAGGATTGAA
AGGAAAACCAGGAAAAATAAAAGGTATAATGTAATTTTTAGCCACTGTATAAGATAAAATACCT
GCATAAAAATAGTGATTTTTCCAGTTTCTTAAAAAAAAGGGTAATCTGGAACATTGGTCCTGGA
AATTTTTTCAAGAACACATCTCAACCTTTGATTATGGTTAAGGCCATAATTTAGGCAGATGGTT
CACTATATTTCACTAAACACTTACATTTTTGTGCACTGCATTGCACTTAAACTAGTGGTCCTGT
GTGGATGTTCTTTTAATGTTCATCTTGATGACTTAATCAGAGATTTACACTGATTTTCCAATTC
GAAGGTCCGATCAAGTGCTAGAGCATGCTACAGAATGTTTTCAAGGATTTGGCCTGAACGTTCG
CATCAGTTGTTTTCATCGTTTGAATCATCCAGGCAGAAAGTATATCCTCAGATTTAACTGATAT
ATTTACCTAATTTGTTCTATAATTTAACATTATTTTGTTGAATTGCATAGATGATAAATGATGA
AGATGCTGAGACACAGCAAAGGCATCTTTCTCCTGTAGAAAGAGTTAAATTGATGCAGCCTCAA
TCTAGTTCTTGTAATTCAACTGAAATTGACAAAGTTGTCAAGGTCGATTCTGGAACATCGTTTT
CTTCTGTAGACCTTCAATCAGTACAAGTGAAAGCATCCGTTCAGCATGATGATATGACCTCAAA
AATTCAGCCTGAAGGCAAAACTGATGGCACTACAACTACTGGAAGTTCATTTAAAGATACCAGT
ACGTTAGAAAAAGAAACAAGCCCAGACAAAGGCCCTGATCCTGATAAATGTGATTCAGGTATAT
GTCATGCAGAAATAATTTATTTATATTTTATCTGCTAGCAAATCAGGATCCATTGACCAAGTAA
TTGAATCCAGCCAATACTGCAGGTGTCAATTTATCATCTTGTGATCCATCCTCTGCCACTCAAT
TTATACTAGAACCTACTTCAGAATTGCTACCGTCTGATGCAACTGTTGTAACAATTGTTCAAGA
CAAGGCTGAATGCAGGCCAAATACTGAACAGCTGACTCAGCAAGTTCAAGTTTTGGGACATCCT
TCTGATCTGCTGAACCGTTCACCTCCTGTTAGTTTGAAAGAATCAGGAAACTCGCTGAAACATA
ACCCTATTCAAGTGAACTTTGATGGTAGCTCAGGTGGAAAACTAGGAGCTCAGAAAGTGAAGCA
TCATACTAGCGCTCCTAATAAGAGTGTTGTTCGTAAGGAGCCGCGGAACAATTACATTCCCAAC
TTCCGGCGTCCTCTCTTGAGTAAGCAGATGACAAACTGGTTTTATGCCAGTAACAGAAGTGATT
TAGATGACAAGCAACTCATTTTGGGTGAAATGGTCAGCAACATGGATGTGCCCTCCTCTCTCAC
CGAGGCACTTTCTTTGGGTCTTAAACCAAAGTCAGATTGGATGATGAGGGTATACGCATTCAAT
TTCTTAAGACAATCTTTGCTAGAGCAGGGACCAAGAGGCATTCAGGAGGTTGCACAAAATTTTG
ACAAGGTTATGAGGTTTGTTAGTCGTTACCTGGCTGATCCTCATCATAAAATAGCACAGGCTGC
TCTCTCATCACTTTCAGAGATCATGCCAGTTTTTAAGAAGCCTTTTGAACATTATCTGGACAAG
ACTCTGCCTCATGTTTTCTCTCAGCTGAATGATCCAAAGGAATCCATCAAGCAGCAGTGCTCAG
CAATTTTGAAACTTGCAGGTGAAATCTATTCCATTGATTCGCTCTTACCGGCCCTACTTCGTAC
ACTAGAAGAACAGAAATCTCCCAAGTCAAAATTGGCAATTATTGAGTTTGCAAACTCTTCTTTT
GTAAAATGCACAGTCAGTTCTGACAACTATTCTAGCAGCAGCTTCCTTAAGCCATGGCTTGAAA
AGCTAGCTCTTTTGTTCAAGGACAAAAACAGTAAGCTAAAAGAGGTTAGCGTTGCTGGTTTCTC
ATCAATCTATTCTCACTACGATCCTGCATCTTTGTTAAGCTTTCTAGTTAGCTTGTCAATGGAA
GAACAAAAGAGATTAAGACGGGCAATAAAGCAGTTGATCCCTACAATAGAGAGCGACTTGGAAG
AGTTTTTGCAACAAAGGAAACATAAGCCAAAGGTGCCACTATTTGATTCTTTTGTTGGTGCATA
TCAACCTTATGCTAAAGGTTTAGTCATAAAGCAAAATAAGCACCATCTGCATGCCACATATCAG
TCTGATTGCCTTCAGGCTGATGATGTGTTCGATTCTGCACTCCACTGTCTCCCAAGAATTTCTT
TGGAAGTTCGTGAGCGACGCGCTGGGAAAATTGAATCTGAATCTTACGATGAATCTAATGGTCA
TGATGCTGAAATGATGGACAAGAAATCTAGTGATACAAGGTCGAGTGACCCCCCTAGAACATTT
GATTATAATGTGATATCAGATAACACAGTTGAGAGTCCAAGAAAAGAGGGTACTGACATCAAGA
GATTTGAGGAATCAAACGAGAGTGAACTGAACATAACTGTCAGAAATAGGAATGTCATATTGAA
TAGCTGTCAAGATCATGGACCAAGCATTTCCAGGACATATCATCAGGTTTCTAACTACTTGATT
GACCCGCCTAATGTTTTGTCTGATCATTGTTTTTTTTAGATTATTCCCATTTCGGTCAGTCTAT
TTTCTTTTGTGGTTTCTATTATACAGTATGATCACATATATTATTTTTGATAAACAGGATGAAA
TGAGTCAAATGGAAGAAGTTCCAGAGATAAATGGCCCTTCCGTGTCAATCAAGGTTAGATAAGG
CTTCGATCTGAAGCTTTAAGTGGCATTGTCCTGTAATTAGTCCTGCTGTCTTTTTTCTAGGGAA
TATGCAAAATGCTTCCGTACTATTGCATTGAGATAGAAAGCCTTTTGCAAAATGATCTAACTAT
ACATAGGGTATAGGCATTAGATCCAGCAACCTGAGAAAAAAAAGTATTCTTTTTAACTAGTTCC
CTTTTCAGAATTTACAACAGATGTCCTCTTCTCTACTTGAGATGCTTGATGATCCAGAGGAATC
CACCAGAGAGCTTGCACTTACTCTATTGGTTGAAATTCTTGAAAAGCAAGTAAGTGTTTCTGAA
GTTATTTAAGAGTGTGTTCTTGGTGTGGCATCATTTAAATGCCATCTTCCATGAAAATGACATT
TGTCATGGCCATGTAATCCAGCGAAAGGCAATGGAGAACTGTATCGATACTCTTATAGTTAAAT
TGCTGCATGCAACCAAAGATGCTGCCTTGAAGGTACTGCACTGACAGTGTTCTTTTCAGCTTGC
AGTTCTTGATGCCATAAAGTTATTGCCCTCTCAAGCCTTTTATGACATTGTCATTGCAGGTTGT
AAATCAAGCCCATATCTGTTTGACAACGGTGGTTACTCAATTTGATCCGCTGACATGCCTAAGA
GTATGTATTATTTGTCTTTGGGATATTTTATTTTCCCTTTTGTAGTAGTTGGTATCTTAAGTGT
TTAATCCAAATAAGCAGGCAATTGCTTCTCAGTTGGCCAACCAGGATGAAAAAGTTCTTATTGT
CAGCATCAACAGTTTGAGCAAG
						
					

			
		

Sequences
Splice junction sequence	GGTATCTTAAGTGTTTAATCCAAATAAGCAGGCAATTGCTTCTCAGTTGGCCAACCAGGATGAA AAAGTTCTTATTGTCAGCATCAACAGTTTGAGCAAGgcatgccatttgctaaatttcttatcaa aagaactgctacgtgactttgaaccgtgcgctgaactgcttattccggtatgttgctaacctat ttttacat
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GCATGCCATTTGCTAAATTTCTTATCAAAAGAACTGCTACGTGACTTTGAACCGTGCGCTGAAC TGCTTATTCCGGTATGTTGCTAACCTATTTTTACATCTGTTGGAAGTTAACAGTATCATCCTGG ATACTTCTAAAATGACCTCGTTACCATCTTATATTTGTAGGTCCTTCTTAAGAATGTTGTGATC ACTATTCATGTAATTGCTGAGTCCTCGGATAATTGTATAAAAGAGGTAATATACCGAAGAAATT TTGTTTTCCATTTGATTTCATCATTTTTATGTTCATTACTTCCAAATACAGATGCTGCGGAACT GCAAAGTAGCTCGTATTCTACCAAAAATTATTGAATTTGCAAAGAATGATAAAAGTGCAGTTCT CCGTGCCAGGTAAGAGAAACACAATATTATAGTATAGCTATAATCTTGGATGAATGATTAAAAA GGCATTTGCTGTTGTAGGTGTTGTGAGTACGCAATATTGATGTTGGAGTTATGGGTTGATACTC CAGAAATACAGAGATCAGTTGATCTGTATGAAGAATTCATAAAATGTTGTATAGAAGATGCAAC TAGTGAGGTATTTATACGGCACGATTATTTGAAATGTATGAAAGGCACTTACACATTTCTTCCT TATCTTTTCCATCCTCCTTTTACCTTTGCAGAAACTTTTTAGTGGATTTTCTTTGCGTTATATA TCACATATATTTAGTTAAATGTACTGTACACCTCAAATGCATAACTACTAGCCATGAATTAAGT ATCTTTTCGTTATTACCAAAAAAAATAAAAATACATACCACATTGCGATGACAAAAGGATTGAA AGGAAAACCAGGAAAAATAAAAGGTATAATGTAATTTTTAGCCACTGTATAAGATAAAATACCT GCATAAAAATAGTGATTTTTCCAGTTTCTTAAAAAAAAGGGTAATCTGGAACATTGGTCCTGGA AATTTTTTCAAGAACACATCTCAACCTTTGATTATGGTTAAGGCCATAATTTAGGCAGATGGTT CACTATATTTCACTAAACACTTACATTTTTGTGCACTGCATTGCACTTAAACTAGTGGTCCTGT GTGGATGTTCTTTTAATGTTCATCTTGATGACTTAATCAGAGATTTACACTGATTTTCCAATTC GAAGGTCCGATCAAGTGCTAGAGCATGCTACAGAATGTTTTCAAGGATTTGGCCTGAACGTTCG CATCAGTTGTTTTCATCGTTTGAATCATCCAGGCAGAAAGTATATCCTCAGATTTAACTGATAT ATTTACCTAATTTGTTCTATAATTTAACATTATTTTGTTGAATTGCATAGATGATAAATGATGA AGATGCTGAGACACAGCAAAGGCATCTTTCTCCTGTAGAAAGAGTTAAATTGATGCAGCCTCAA TCTAGTTCTTGTAATTCAACTGAAATTGACAAAGTTGTCAAGGTCGATTCTGGAACATCGTTTT CTTCTGTAGACCTTCAATCAGTACAAGTGAAAGCATCCGTTCAGCATGATGATATGACCTCAAA AATTCAGCCTGAAGGCAAAACTGATGGCACTACAACTACTGGAAGTTCATTTAAAGATACCAGT ACGTTAGAAAAAGAAACAAGCCCAGACAAAGGCCCTGATCCTGATAAATGTGATTCAGGTATAT GTCATGCAGAAATAATTTATTTATATTTTATCTGCTAGCAAATCAGGATCCATTGACCAAGTAA TTGAATCCAGCCAATACTGCAGGTGTCAATTTATCATCTTGTGATCCATCCTCTGCCACTCAAT TTATACTAGAACCTACTTCAGAATTGCTACCGTCTGATGCAACTGTTGTAACAATTGTTCAAGA CAAGGCTGAATGCAGGCCAAATACTGAACAGCTGACTCAGCAAGTTCAAGTTTTGGGACATCCT TCTGATCTGCTGAACCGTTCACCTCCTGTTAGTTTGAAAGAATCAGGAAACTCGCTGAAACATA ACCCTATTCAAGTGAACTTTGATGGTAGCTCAGGTGGAAAACTAGGAGCTCAGAAAGTGAAGCA TCATACTAGCGCTCCTAATAAGAGTGTTGTTCGTAAGGAGCCGCGGAACAATTACATTCCCAAC TTCCGGCGTCCTCTCTTGAGTAAGCAGATGACAAACTGGTTTTATGCCAGTAACAGAAGTGATT TAGATGACAAGCAACTCATTTTGGGTGAAATGGTCAGCAACATGGATGTGCCCTCCTCTCTCAC CGAGGCACTTTCTTTGGGTCTTAAACCAAAGTCAGATTGGATGATGAGGGTATACGCATTCAAT TTCTTAAGACAATCTTTGCTAGAGCAGGGACCAAGAGGCATTCAGGAGGTTGCACAAAATTTTG ACAAGGTTATGAGGTTTGTTAGTCGTTACCTGGCTGATCCTCATCATAAAATAGCACAGGCTGC TCTCTCATCACTTTCAGAGATCATGCCAGTTTTTAAGAAGCCTTTTGAACATTATCTGGACAAG ACTCTGCCTCATGTTTTCTCTCAGCTGAATGATCCAAAGGAATCCATCAAGCAGCAGTGCTCAG CAATTTTGAAACTTGCAGGTGAAATCTATTCCATTGATTCGCTCTTACCGGCCCTACTTCGTAC ACTAGAAGAACAGAAATCTCCCAAGTCAAAATTGGCAATTATTGAGTTTGCAAACTCTTCTTTT GTAAAATGCACAGTCAGTTCTGACAACTATTCTAGCAGCAGCTTCCTTAAGCCATGGCTTGAAA AGCTAGCTCTTTTGTTCAAGGACAAAAACAGTAAGCTAAAAGAGGTTAGCGTTGCTGGTTTCTC ATCAATCTATTCTCACTACGATCCTGCATCTTTGTTAAGCTTTCTAGTTAGCTTGTCAATGGAA GAACAAAAGAGATTAAGACGGGCAATAAAGCAGTTGATCCCTACAATAGAGAGCGACTTGGAAG AGTTTTTGCAACAAAGGAAACATAAGCCAAAGGTGCCACTATTTGATTCTTTTGTTGGTGCATA TCAACCTTATGCTAAAGGTTTAGTCATAAAGCAAAATAAGCACCATCTGCATGCCACATATCAG TCTGATTGCCTTCAGGCTGATGATGTGTTCGATTCTGCACTCCACTGTCTCCCAAGAATTTCTT TGGAAGTTCGTGAGCGACGCGCTGGGAAAATTGAATCTGAATCTTACGATGAATCTAATGGTCA TGATGCTGAAATGATGGACAAGAAATCTAGTGATACAAGGTCGAGTGACCCCCCTAGAACATTT GATTATAATGTGATATCAGATAACACAGTTGAGAGTCCAAGAAAAGAGGGTACTGACATCAAGA GATTTGAGGAATCAAACGAGAGTGAACTGAACATAACTGTCAGAAATAGGAATGTCATATTGAA TAGCTGTCAAGATCATGGACCAAGCATTTCCAGGACATATCATCAGGTTTCTAACTACTTGATT GACCCGCCTAATGTTTTGTCTGATCATTGTTTTTTTTAGATTATTCCCATTTCGGTCAGTCTAT TTTCTTTTGTGGTTTCTATTATACAGTATGATCACATATATTATTTTTGATAAACAGGATGAAA TGAGTCAAATGGAAGAAGTTCCAGAGATAAATGGCCCTTCCGTGTCAATCAAGGTTAGATAAGG CTTCGATCTGAAGCTTTAAGTGGCATTGTCCTGTAATTAGTCCTGCTGTCTTTTTTCTAGGGAA TATGCAAAATGCTTCCGTACTATTGCATTGAGATAGAAAGCCTTTTGCAAAATGATCTAACTAT ACATAGGGTATAGGCATTAGATCCAGCAACCTGAGAAAAAAAAGTATTCTTTTTAACTAGTTCC CTTTTCAGAATTTACAACAGATGTCCTCTTCTCTACTTGAGATGCTTGATGATCCAGAGGAATC CACCAGAGAGCTTGCACTTACTCTATTGGTTGAAATTCTTGAAAAGCAAGTAAGTGTTTCTGAA GTTATTTAAGAGTGTGTTCTTGGTGTGGCATCATTTAAATGCCATCTTCCATGAAAATGACATT TGTCATGGCCATGTAATCCAGCGAAAGGCAATGGAGAACTGTATCGATACTCTTATAGTTAAAT TGCTGCATGCAACCAAAGATGCTGCCTTGAAGGTACTGCACTGACAGTGTTCTTTTCAGCTTGC AGTTCTTGATGCCATAAAGTTATTGCCCTCTCAAGCCTTTTATGACATTGTCATTGCAGGTTGT AAATCAAGCCCATATCTGTTTGACAACGGTGGTTACTCAATTTGATCCGCTGACATGCCTAAGA GTATGTATTATTTGTCTTTGGGATATTTTATTTTCCCTTTTGTAGTAGTTGGTATCTTAAGTGT TTAATCCAAATAAGCAGGCAATTGCTTCTCAGTTGGCCAACCAGGATGAAAAAGTTCTTATTGT CAGCATCAACAGTTTGAGCAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.130127571

Conservation Information
Conserved circRNAs	NA
PMCS	0.130127571

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							34984060-34988186(+)
34983762-34988036(-)
						
					

						Potential amino acid sequence
						
							MLRNCKVARILPKIIEFAKNDKSAVLRARCCEYAILMLELWVDTPEIQRSVDLYEEFIKCCIED
ATSEVRSSARACYRMFSRIWPERSHQLFSSFESSRQKMINDEDAETQQRHLSPVERVKLMQPQS
SSCNSTEIDKVVKVDSGTSFSSVDLQSVQVKASVQHDDMTSKIQPEGKTDGTTTTGSSFKDTST
LEKETSPDKGPDPDKCDSGVNLSSCDPSSATQFILEPTSELLPSDATVVTIVQDKAECRPNTEQ
LTQQVQVLGHPSDLLNRSPPVSLKESGNSLKHNPIQVNFDGSSGGKLGAQKVKHHTSAPNKSVV
RKEPRNNYIPNFRRPLLSKQMTNWFYASNRSDLDDKQLILGEMVSNMDVPSSLTEALSLGLKPK
SDWMMRVYAFNFLRQSLLEQGPRGIQEVAQNFDKVMRFVSRYLADPHHKIAQAALSSLSEIMPV
FKKPFEHYLDKTLPHVFSQLNDPKESIKQQCSAILKLAGEIYSIDSLLPALLRTLEEQKSPKSK
LAIIEFANSSFVKCTVSSDNYSSSSFLKPWLEKLALLFKDKNSKLKEVSVAGFSSIYSHYDPAS
LLSFLVSLSMEEQKRLRRAIKQLIPTIESDLEEFLQQRKHKPKVPLFDSFVGAYQPYAKGLVIK
QNKHHLHATYQSDCLQADDVFDSALHCLPRISLEVRERRAGKIESESYDESNGHDAEMMDKKSS
DTRSSDPPRTFDYNVISDNTVESPRKEGTDIKRFEESNESELNITVRNRNVILNSCQDHGPSIS
RTYHQDEMSQMEEVPEINGPSVSIKNLQQMSSSLLEMLDDPEESTRELALTLLVEILEKQRKAM
ENCIDTLIVKLLHATKDAALKVVNQAHICLTTVVTQFDPLTCLRAIASQLANQDEKVLIVSINS
LSKACHLLNFLSKELLRDFEPCAELLIPVLLKNVVITIHVIAESSDNCIKEMLRNCKVARILPK
IIEFAKNDKSAVLRARCCEYAILMLELWVDTPEIQRSVDLYEEFIKCCIEDATSEVRSSARACY
RMFSRIWPERSHQLFSSFESSRQKMINDEDAETQQRHLSPVERVKLMQPQSSSCNSTEIDKVVK
VDSGTSFSSVDLQSVQVKASVQHDDMTSKIQPEGKTDGTTTTGSSFKDTSTLEKETSPDKGPDP
DKCDSGVNLSSCDPSSATQFILEPTSELLPSDATVVTIVQDKAECRPNTEQLTQQVQVLGHPSD
LLNRSPPVSLKESGNSLKHNPIQVNFDGSSGGKLGAQKVKHHTSAPNKSVVRKEPRNNYIPNFR
RPLLSKQMTNWFYASNRSDLDDKQLILGEMVSNMDVPSSLTEALSLGLKPKSDWMMRVYAFNFL
RQSLLEQGPRGIQEVAQNFDKVMRFVSRYLADPHHKIAQAALSSLSEIMPVFKKPFEHYLDKTL
PHVFSQLNDPKESIKQQCSAILKLAGEIYSIDSLLPALLRTLEEQKSPKSKLAIIEFANSSFVK
CTVSSDNYSSSSFLKPWLEKLALLFKDKNSKLKEVSVAGFSSIYSHYDPASLLSFLVSLSMEEQ
KRLRRAIKQLIPTIESDLEEFLQQRKHKPKVPLFDSFVGAYQPYAKGLVIKQNKHHLHATYQSD
CLQADDVFDSALHCLPRISLEVRERRAGKIESESYDESNGHDAEMMDKKSSDTRSSDPPRTFDY
NVISDNTVESPRKEGTDIKRFEESNESELNITVRNRNVILNSCQDHGPSISRTYHQDEMSQMEE
VPEINGPSVSIKNLQQMSSSLLEMLDDPEESTRELALTLLVEILEKQRKAMENCIDTLIVKLLH
ATKDAALKVVNQAHICLTTVVTQFDPLTCLRAIASQLANQDEKVLIVSINSLSKACHLLNFLSK
ELLRDFEPCAELLIPVLLKNVVITIHVIAESSDNCIKEMLRNCKVARILPKIIEFAKNDKSAVL
RARCCEYAILMLELWVDTPEIQRSVDLYEEFIKCCIEDATSEVRSSARACYRMFSRIWPERSHQ
LFSSFESSRQKMINDEDAETQQRHLSPVERVKLMQPQSSSCNSTEIDKVVKVDSGTSFSSVDLQ
SVQVKASVQHDDMTSKIQPEGKTDGTTTTGSSFKDTSTLEKETSPDKGPDPDKCDSGVNLSSCD
PSSATQFILEPTSELLPSDATVVTIVQDKAECRPNTEQLTQQVQVLGHPSDLLNRSPPVSLKES
GNSLKHNPIQVNFDGSSGGKLGAQKVKHHTSAPNKSVVRKEPRNNYIPNFRRPLLSKQMTNWFY
ASNRSDLDDKQLILGEMVSNMDVPSSLTEALSLGLKPKSDWMMRVYAFNFLRQSLLEQGPRGIQ
EVAQNFDKVMRFVSRYLADPHHKIAQAALSSLSEIMPVFKKPFEHYLDKTLPHVFSQLNDPKES
IKQQCSAILKLAGEIYSIDSLLPALLRTLEEQKSPKSKLAIIEFANSSFVKCTVSSDNYSSSSF
LKPWLEKLALLFKDKNSKLKEVSVAGFSSIYSHYDPASLLSFLVSLSMEEQKRLRRAIKQLIPT
IESDLEEFLQQRKHKPKVPLFDSFVGAYQPYAKGLVIKQNKHHLHATYQSDCLQADDVFDSALH
CLPRISLEVRERRAGKIESESYDESNGHDAEMMDKKSSDTRSSDPPRTFDYNVISDNTVESPRK
EGTDIKRFEESNESELNITVRNRNVILNSCQDHGPSISRTYHQDEMSQMEEVPEINGPSVSIKN
LQQMSSSLLEMLDDPEESTRELALTLLVEILEKQRKAMENCIDTLIVKLLHATKDAALKVVNQA
HICLTTVVTQFDPLTCLRAIASQLANQDEKVLIVSINSLSKACHLLNFLSKELLRDFEPCAELL
IPVLLKNVVITIHVIAESSDNCIKEMLRNCKVARILPKIIEFAKNDKSAVLRARCCEYAILMLE
LWVDTPEIQRSVDLYEEFIKCCIEDATSEVRSSARACYRMFSRIWPERSHQLFSSFESSRQKMI
NDEDAETQQRHLSPVERVKLMQPQSSSCNSTEIDKVVKVDSGTSFSSVDLQSVQVKASVQHDDM
TSKIQPEGKTDGTTTTGSSFKDTSTLEKETSPDKGPDPDKCDSGVNLSSCDPSSATQFILEPTS
ELLPSDATVVTIVQDKAECRPNTEQLTQQVQVLGHPSDLLNRSPPVSLKESGNSLKHNPIQVNF
DGSSGGKLGAQKVKHHTSAPNKSVVRKEPRNNYIPNFRRPLLSKQMTNWFYASNRSDLDDKQLI
LGEMVSNMDVPSSLTEALSLGLKPKSDWMMRVYAFNFLRQSLLEQGPRGIQEVAQNFDKVMRFV
SRYLADPHHKIAQAALSSLSEIMPVFKKPFEHYLDKTLPHVFSQLNDPKESIKQQCSAILKLAG
EIYSIDSLLPALLRTLEEQKSPKSKLAIIEFANSSFVKCTVSSDNYSSSSFLKPWLEKLALLFK
DKNSKLKEVSVAGFSSIYSHYDPASLLSFLVSLSMEEQKRLRRAIKQLIPTIESDLEEFLQQRK
HKPKVPLFDSFVGAYQPYAKGLVIKQNKHHLHATYQSDCLQADDVFDSALHCLPRISLEVRERR
AGKIESESYDESNGHDAEMMDKKSSDTRSSDPPRTFDYNVISDNTVESPRKEGTDIKRFEESNE
SELNITVRNRNVILNSCQDHGPSISRTYHQDEMSQMEEVPEINGPSVSIKNLQQMSSSLLEMLD
DPEESTRELALTLLVEILEKQRKAMENCIDTLIVKLLHATKDAALKVVNQAHICLTTVVTQFDP
LTCLRAIASQLANQDEKVLIVSINSLSK(+)
MACLAQTVDADNKNFFILVGQLRSNCS*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	34984060-34988186(+) 34983762-34988036(-)
Potential amino acid sequence	MLRNCKVARILPKIIEFAKNDKSAVLRARCCEYAILMLELWVDTPEIQRSVDLYEEFIKCCIED ATSEVRSSARACYRMFSRIWPERSHQLFSSFESSRQKMINDEDAETQQRHLSPVERVKLMQPQS SSCNSTEIDKVVKVDSGTSFSSVDLQSVQVKASVQHDDMTSKIQPEGKTDGTTTTGSSFKDTST LEKETSPDKGPDPDKCDSGVNLSSCDPSSATQFILEPTSELLPSDATVVTIVQDKAECRPNTEQ LTQQVQVLGHPSDLLNRSPPVSLKESGNSLKHNPIQVNFDGSSGGKLGAQKVKHHTSAPNKSVV RKEPRNNYIPNFRRPLLSKQMTNWFYASNRSDLDDKQLILGEMVSNMDVPSSLTEALSLGLKPK SDWMMRVYAFNFLRQSLLEQGPRGIQEVAQNFDKVMRFVSRYLADPHHKIAQAALSSLSEIMPV FKKPFEHYLDKTLPHVFSQLNDPKESIKQQCSAILKLAGEIYSIDSLLPALLRTLEEQKSPKSK LAIIEFANSSFVKCTVSSDNYSSSSFLKPWLEKLALLFKDKNSKLKEVSVAGFSSIYSHYDPAS LLSFLVSLSMEEQKRLRRAIKQLIPTIESDLEEFLQQRKHKPKVPLFDSFVGAYQPYAKGLVIK QNKHHLHATYQSDCLQADDVFDSALHCLPRISLEVRERRAGKIESESYDESNGHDAEMMDKKSS DTRSSDPPRTFDYNVISDNTVESPRKEGTDIKRFEESNESELNITVRNRNVILNSCQDHGPSIS RTYHQDEMSQMEEVPEINGPSVSIKNLQQMSSSLLEMLDDPEESTRELALTLLVEILEKQRKAM ENCIDTLIVKLLHATKDAALKVVNQAHICLTTVVTQFDPLTCLRAIASQLANQDEKVLIVSINS LSKACHLLNFLSKELLRDFEPCAELLIPVLLKNVVITIHVIAESSDNCIKEMLRNCKVARILPK IIEFAKNDKSAVLRARCCEYAILMLELWVDTPEIQRSVDLYEEFIKCCIEDATSEVRSSARACY RMFSRIWPERSHQLFSSFESSRQKMINDEDAETQQRHLSPVERVKLMQPQSSSCNSTEIDKVVK VDSGTSFSSVDLQSVQVKASVQHDDMTSKIQPEGKTDGTTTTGSSFKDTSTLEKETSPDKGPDP DKCDSGVNLSSCDPSSATQFILEPTSELLPSDATVVTIVQDKAECRPNTEQLTQQVQVLGHPSD LLNRSPPVSLKESGNSLKHNPIQVNFDGSSGGKLGAQKVKHHTSAPNKSVVRKEPRNNYIPNFR RPLLSKQMTNWFYASNRSDLDDKQLILGEMVSNMDVPSSLTEALSLGLKPKSDWMMRVYAFNFL RQSLLEQGPRGIQEVAQNFDKVMRFVSRYLADPHHKIAQAALSSLSEIMPVFKKPFEHYLDKTL PHVFSQLNDPKESIKQQCSAILKLAGEIYSIDSLLPALLRTLEEQKSPKSKLAIIEFANSSFVK CTVSSDNYSSSSFLKPWLEKLALLFKDKNSKLKEVSVAGFSSIYSHYDPASLLSFLVSLSMEEQ KRLRRAIKQLIPTIESDLEEFLQQRKHKPKVPLFDSFVGAYQPYAKGLVIKQNKHHLHATYQSD CLQADDVFDSALHCLPRISLEVRERRAGKIESESYDESNGHDAEMMDKKSSDTRSSDPPRTFDY NVISDNTVESPRKEGTDIKRFEESNESELNITVRNRNVILNSCQDHGPSISRTYHQDEMSQMEE VPEINGPSVSIKNLQQMSSSLLEMLDDPEESTRELALTLLVEILEKQRKAMENCIDTLIVKLLH ATKDAALKVVNQAHICLTTVVTQFDPLTCLRAIASQLANQDEKVLIVSINSLSKACHLLNFLSK ELLRDFEPCAELLIPVLLKNVVITIHVIAESSDNCIKEMLRNCKVARILPKIIEFAKNDKSAVL RARCCEYAILMLELWVDTPEIQRSVDLYEEFIKCCIEDATSEVRSSARACYRMFSRIWPERSHQ LFSSFESSRQKMINDEDAETQQRHLSPVERVKLMQPQSSSCNSTEIDKVVKVDSGTSFSSVDLQ SVQVKASVQHDDMTSKIQPEGKTDGTTTTGSSFKDTSTLEKETSPDKGPDPDKCDSGVNLSSCD PSSATQFILEPTSELLPSDATVVTIVQDKAECRPNTEQLTQQVQVLGHPSDLLNRSPPVSLKES GNSLKHNPIQVNFDGSSGGKLGAQKVKHHTSAPNKSVVRKEPRNNYIPNFRRPLLSKQMTNWFY ASNRSDLDDKQLILGEMVSNMDVPSSLTEALSLGLKPKSDWMMRVYAFNFLRQSLLEQGPRGIQ EVAQNFDKVMRFVSRYLADPHHKIAQAALSSLSEIMPVFKKPFEHYLDKTLPHVFSQLNDPKES IKQQCSAILKLAGEIYSIDSLLPALLRTLEEQKSPKSKLAIIEFANSSFVKCTVSSDNYSSSSF LKPWLEKLALLFKDKNSKLKEVSVAGFSSIYSHYDPASLLSFLVSLSMEEQKRLRRAIKQLIPT IESDLEEFLQQRKHKPKVPLFDSFVGAYQPYAKGLVIKQNKHHLHATYQSDCLQADDVFDSALH CLPRISLEVRERRAGKIESESYDESNGHDAEMMDKKSSDTRSSDPPRTFDYNVISDNTVESPRK EGTDIKRFEESNESELNITVRNRNVILNSCQDHGPSISRTYHQDEMSQMEEVPEINGPSVSIKN LQQMSSSLLEMLDDPEESTRELALTLLVEILEKQRKAMENCIDTLIVKLLHATKDAALKVVNQA HICLTTVVTQFDPLTCLRAIASQLANQDEKVLIVSINSLSKACHLLNFLSKELLRDFEPCAELL IPVLLKNVVITIHVIAESSDNCIKEMLRNCKVARILPKIIEFAKNDKSAVLRARCCEYAILMLE LWVDTPEIQRSVDLYEEFIKCCIEDATSEVRSSARACYRMFSRIWPERSHQLFSSFESSRQKMI NDEDAETQQRHLSPVERVKLMQPQSSSCNSTEIDKVVKVDSGTSFSSVDLQSVQVKASVQHDDM TSKIQPEGKTDGTTTTGSSFKDTSTLEKETSPDKGPDPDKCDSGVNLSSCDPSSATQFILEPTS ELLPSDATVVTIVQDKAECRPNTEQLTQQVQVLGHPSDLLNRSPPVSLKESGNSLKHNPIQVNF DGSSGGKLGAQKVKHHTSAPNKSVVRKEPRNNYIPNFRRPLLSKQMTNWFYASNRSDLDDKQLI LGEMVSNMDVPSSLTEALSLGLKPKSDWMMRVYAFNFLRQSLLEQGPRGIQEVAQNFDKVMRFV SRYLADPHHKIAQAALSSLSEIMPVFKKPFEHYLDKTLPHVFSQLNDPKESIKQQCSAILKLAG EIYSIDSLLPALLRTLEEQKSPKSKLAIIEFANSSFVKCTVSSDNYSSSSFLKPWLEKLALLFK DKNSKLKEVSVAGFSSIYSHYDPASLLSFLVSLSMEEQKRLRRAIKQLIPTIESDLEEFLQQRK HKPKVPLFDSFVGAYQPYAKGLVIKQNKHHLHATYQSDCLQADDVFDSALHCLPRISLEVRERR AGKIESESYDESNGHDAEMMDKKSSDTRSSDPPRTFDYNVISDNTVESPRKEGTDIKRFEESNE SELNITVRNRNVILNSCQDHGPSISRTYHQDEMSQMEEVPEINGPSVSIKNLQQMSSSLLEMLD DPEESTRELALTLLVEILEKQRKAMENCIDTLIVKLLHATKDAALKVVNQAHICLTTVVTQFDP LTCLRAIASQLANQDEKVLIVSINSLSK(+) MACLAQTVDADNKNFFILVGQLRSNCS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os02g0816300_circ_g.6

Address

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