Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | orai.003G041300_circ_g.2 |
| ID in PlantcircBase | gra_circ_000237 |
| Alias | Chr03:4886732|4891589 |
| Organism | Gossypium raimondii |
| Position | chrChr03: 4886732-4891589 JBrowse» |
| Reference genome | Graimondii_221 |
| Type | e-circRNA |
| Identification method | CIRI |
| Parent gene | Gorai.003G041300 |
| Parent gene annotation | NA |
| Parent gene strand | - |
| Alternative splicing | orai.003G041300_circ_g.1 orai.003G041300_circ_g.3 |
| Support reads | 35 |
| Tissues | ovule |
| Exon boundary | Yes-Yes |
| Splicing signals | CT-AC |
| Number of exons covered | Gorai.003G041300.9:2 Gorai.003G041300.3:2 Gorai.003G041300.8:1 Gorai.003G041300.5:2 Gorai.003G041300.1:2 Gorai.003G041300.6:2 Gorai.003G041300.7:2 Gorai.003G041300.2:1 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 1.114592034 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | gra-miR8743e |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Zhao et al., 2017b |