Splice junction sequence |
TTTATGGTGTTGTAAAAGATGGACCTGGTGCAACATTGGCTACTGTAACAGAGTACATGGTTGA TGGTTCTCTGAGACATGTTCTAGTCAGGAAAGATAGgatgaaaagtcagaaacaaggaacgctg gacttcccccagttggcccgtctctggcagattacgacacgagtggcttgcaggtatgatggac tatcaatt
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 398 Transcript exons: 5566449-5566529,5566710-5566862,5566988-5567151 GATGAAAAGTCAGAAACAAGGAACGCTGGACTTCCCCCAGTTGGCCCGTCTCTGGCAGATTACG ACACGAGTGGCTTGCAGATCATTATGAATGACGATCTCGAGGAGCTAAAGGAGCTTGGTTCTGG CACATTCGGTACAGTGTATCATGGTAAATGGAGAGGATCAGATGTTGCCATCAAAAGGATAAAG AAGAGTTGCTTTGCTGGCCGATCATCTGAGCAAGAAAGATTAACTGGTGAATTCTGGGGAGAAG CTGAAATTCTTTCAAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTTGTAAAAGATGG ACCTGGTGCAACATTGGCTACTGTAACAGAGTACATGGTTGATGGTTCTCTGAGACATGTTCTA GTCAGGAAAGATAG
|
Genomic sequence |
GATGAAAAGTCAGAAACAAGGAACGCTGGACTTCCCCCAGTTGGCCCGTCTCTGGCAGATTACG ACACGAGTGGCTTGCAGGTATGATGGACTATCAATTCTTACACCTGATAGAAGTTTTATTTATT CTGCATTAGATAAAGGATTGTAAGTTTCAGATTGTTAGAAGAATCAAACATAGTATAGCCCTTG TTTGTCATATAAAATAAATGTCTGCTTCTAATCTCCTCTTGTGATCTTTCTATTCTTAAATGTT TCTAGATCATTATGAATGACGATCTCGAGGAGCTAAAGGAGCTTGGTTCTGGCACATTCGGTAC AGTGTATCATGGTAAATGGAGAGGATCAGATGTTGCCATCAAAAGGATAAAGAAGAGTTGCTTT GCTGGCCGATCATCTGAGCAAGAAAGATTAGTGAGTGTTTCTGCATTTTCTTTTGGAAAATTTT CCTTTGTGCATATGTTAAAAGGATTAGAGAGTGATAACACTTGTCGATTGCTCATCATGGAAAG CTTATGAATACCTTTCTTGTTCGCTAGACTGGTGAATTCTGGGGAGAAGCTGAAATTCTTTCAA AGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTTGTAAAAGATGGACCTGGTGCAACATT GGCTACTGTAACAGAGTACATGGTTGATGGTTCTCTGAGACATGTTCTAGTCAGGAAAGATAG |