Plant Circular RNA Database

Detail information of Os02g0639000_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os02g0639000_circ_g.1
					
						ID in PlantcircBase
						osa_circ_015731
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 25628679-25632979  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os02g0639000						
					
						Parent gene annotation
						
							Double stranded RNA binding domain (dsRBD) containing protein, R
egulation of stress responses (Os02t0639000-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os02g0639000_circ_g.2 Os02g0639000_circ_g.3 Os02g0639000_circ_g.4 Os02g0639000_circ_g.5 Os02g0639000_circ_g.6 Os02g0639000_circ_g.7 Os02g0639000_circ_g.8 Os02g0639000_circ_g.9 Os02g0639000_circ_g.10 Os02g0639000_circ_g.11 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0639000-01:11

General Information
CircRNA Name	Os02g0639000_circ_g.1
ID in PlantcircBase	osa_circ_015731
Alias	NA
Organism	Oryza sativa
Position	chr2: 25628679-25632979 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os02g0639000
Parent gene annotation	Double stranded RNA binding domain (dsRBD) containing protein, R egulation of stress responses (Os02t0639000-01)
Parent gene strand	+
Alternative splicing	Os02g0639000_circ_g.2 Os02g0639000_circ_g.3 Os02g0639000_circ_g.4 Os02g0639000_circ_g.5 Os02g0639000_circ_g.6 Os02g0639000_circ_g.7 Os02g0639000_circ_g.8 Os02g0639000_circ_g.9 Os02g0639000_circ_g.10 Os02g0639000_circ_g.11
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0639000-01:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGT
GTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAactgcagttgttccactaggagaggaag
aattgcatttagtggcaatgacatccaggagaaacctgacaaatcacgcatgtttctggggata
taaagtgc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACC
TGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGAC
TATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAAT
ACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATC
CACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAA
GCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTG
GTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGA
ATATTATCTTGACGAGAATAAATCCTTTGGTATGTGATTCATTAGTTGAATTTGCATTACAACT
GTTTTCACGAGCATATATTGGTCAGCAGATAGATACATTGTGATTCCAGTTTATGCTGGATGTC
TTTTTGAATTTTCCTTGCACATCATACCTCCTAGGAGTCTTATATTTGTGCTGTCTAGTATGCA
GTTGACTTGTTCCTTGATCTCTCTCTCTCATTATCAAGAAAGGTTCTCTAGAATTTACATGCAT
TCTCTATTGGGAAAATAGAAGTTTGTAAGTTGAGCAATAGCAATGACAGTTCAGCGTGCCTTTT
CACATTGCTTTGATGTGGCCTGACTTTGGTTGCATAAGTTTGTACAAAACTTCCAGGCTAAGGC
TTTTTTTTTTTTTTTTTGTGTAGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATG
GGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACA
ATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTA
ACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTATGTGTCTCTTTTCTGATTA
AGTATGTCATGAACTTAGTACAATGTTGTTTTCAAATGTTCCACAATTAGAGCTCTGGTCATGA
TTGCAGCTTCAATGCTTCCATCACCCTTTATGCATATTGTTTGATCCATCCTACTGAAGCTAAC
AGCGACTTTTTTTTTCTAGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCC
ATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAG
AGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGTAACGGTCATGCTC
CATACCAATGCAAATAGTATCTTCTTGCTTGGACACTAAAGAATCTCCTTCAACTTTACAGGCA
AACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCT
TTAAGTAAGATTATCGGCTCTGCTAATGCGCTTTCCATATTATATATCATGGGCTCATGGTACT
CTACTATCAAACTAAGTCGGACTGATTGACATAGAACTTTCATGATTCAATTTGCAGGGACTTT
GATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCAT
CTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGTAAAAAAATTGGTAAATGCAATGCTACC
ATGTTCACCTCTCAGTAATTAACTGTTCTTCTGATCTTCATTAGGATGAGAATGTTGCGGCAGT
GAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATG
AAGGTTTGAGCTCTTTGCGCCTTTATCTGGATGTTTGATTGTGGGCTGACAAAATCACAAAAAG
AAGAGACATCCAAGAATAATTCATAGAAAGCTGTTTTTTTTAACATTGGTTTAGATGTTGAACT
CCTGAAGCATGTTGCATTATTTTAAGTAACAATTGTTGAAACATTTACCTAGTCAAGTACCAAT
GATATAACATATAGATTGTGCTGGATCTGTTCTTTCAGTTTGTTACATCTTCCGATCTTCCTGT
ATAATAGCTCCACACATCTTCCTTTAAAGCTGTATTCAATATATGACGGTAATAGAGATTGCAA
CAACTATTAATGTCTATATTTCTAATATTGTCTTTAAAACAGTAAAATGATAAGTTATTTTGTT
AATGTGGCATCAACAAAATTATAATTTCAGCATGAGATACGCTTGTCATGAGCTATGTAACATT
TAATGAAACATTCTGAGCAGAATATTCGAAAGGAAATTATTTGCCGATAGCTTCATATGCTTCT
TTACATATACATCTGTTTTGAAATTTTGCGTCATTTCTCTCACATATTGCACTTGCATCATTTC
TCCCTCACATATTGCCCTTCAACTATTTTTCAGGAAGCATCTGGAAATGCTCAAGCTTTTACTA
CAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGC
ACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACT
CAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTG
AAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCA
AGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCA
GTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGG
GTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCC
ATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTAT
CCCTCCCAGGTAGGCGATTCAACTTTTGTAGTCTCTGCAATTGCTATCAAGACATTTCTATACC
ACTCTGTAACAAACATTTTCTTGACTCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAA
CCATGCACCGTCAAGATACAGATCCTTCCCTGGTATTCTTACTATTTCCATTTGGAATTCTGAT
GTTGATCTTTTAGGGTGGTCCTGAGAATTAGGCAGAGACGTCGTGCATTTGTTGATAAACAAGG
TCCTATTTTTTGCGAAAAGGAGTTTCTTAGGTTCAGCCACCAACAGACAAAAATGAGAACTCTT
CAAAACATTAAAAGACAATGAAGTTAAGGTTTAGGGCTGTAATTTTGTTTCTAGCACTTGGCAT
TCTGGCTTGCTATACTATCTGTATGACCATATGAGTTTGTTGTGCTTTACTGCCTGTGATGTAG
TAAGTTAACTTTGTTTGTTTTAGATTATATATGCTGTTGACTATGATTTTACAAACTCAAGTAT
AGGTGCACTCATTAATTCATTATGGCTTGTACACTTTCTCACTTAAACGAGTTCTCAAATATTT
TGCCTAGATAATTGTTATGTAAAGTGTAACTTAATTTCCATAGTGGAAATTGCAATCGAATTCC
GTAAGAACGTTAAAAAGCTTTTGTTCTTTGCAAAGTTGAGTATAGCATAAAAACTTTACTATGC
TTAACTGTATCTCCATCCTGAAGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGA
AACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAG
AGGAGATTGCTATGAAGTGTGGTTCTAAGGTAGTTTTGAACATTCAGGTCGCACCATACAATCC
AGTTTATAATCATTGACACTTTTCATTGTTTTTAGGTGGAGTACAGGTCAGCACTATGTGATAC
TGCGGATTTACAGTTCTCAATCGAGGTAGATTGGAACTTCTATTCAATGTTTATTATTGGTATC
TCTGCAGTAAATTTAGTTCCAAAAAATCAGAGCTCCTCTCCTGGACTTGTTGAAAATTGTAAGC
TTACCTTATTTATATCCCTTTCTTATGTCTATTACCTCTTTCAGGTTTGGATTGTTGGAGAAAA
AGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTA
AGAAATTTAGCTA
						
					

			
		

Sequences
Splice junction sequence	CAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGT GTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAactgcagttgttccactaggagaggaag aattgcatttagtggcaatgacatccaggagaaacctgacaaatcacgcatgtttctggggata taaagtgc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACC TGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGAC TATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAAT ACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATC CACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAA GCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTG GTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGA ATATTATCTTGACGAGAATAAATCCTTTGGTATGTGATTCATTAGTTGAATTTGCATTACAACT GTTTTCACGAGCATATATTGGTCAGCAGATAGATACATTGTGATTCCAGTTTATGCTGGATGTC TTTTTGAATTTTCCTTGCACATCATACCTCCTAGGAGTCTTATATTTGTGCTGTCTAGTATGCA GTTGACTTGTTCCTTGATCTCTCTCTCTCATTATCAAGAAAGGTTCTCTAGAATTTACATGCAT TCTCTATTGGGAAAATAGAAGTTTGTAAGTTGAGCAATAGCAATGACAGTTCAGCGTGCCTTTT CACATTGCTTTGATGTGGCCTGACTTTGGTTGCATAAGTTTGTACAAAACTTCCAGGCTAAGGC TTTTTTTTTTTTTTTTTGTGTAGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATG GGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACA ATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTA ACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTATGTGTCTCTTTTCTGATTA AGTATGTCATGAACTTAGTACAATGTTGTTTTCAAATGTTCCACAATTAGAGCTCTGGTCATGA TTGCAGCTTCAATGCTTCCATCACCCTTTATGCATATTGTTTGATCCATCCTACTGAAGCTAAC AGCGACTTTTTTTTTCTAGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCC ATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAG AGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGTAACGGTCATGCTC CATACCAATGCAAATAGTATCTTCTTGCTTGGACACTAAAGAATCTCCTTCAACTTTACAGGCA AACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCT TTAAGTAAGATTATCGGCTCTGCTAATGCGCTTTCCATATTATATATCATGGGCTCATGGTACT CTACTATCAAACTAAGTCGGACTGATTGACATAGAACTTTCATGATTCAATTTGCAGGGACTTT GATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCAT CTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGTAAAAAAATTGGTAAATGCAATGCTACC ATGTTCACCTCTCAGTAATTAACTGTTCTTCTGATCTTCATTAGGATGAGAATGTTGCGGCAGT GAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATG AAGGTTTGAGCTCTTTGCGCCTTTATCTGGATGTTTGATTGTGGGCTGACAAAATCACAAAAAG AAGAGACATCCAAGAATAATTCATAGAAAGCTGTTTTTTTTAACATTGGTTTAGATGTTGAACT CCTGAAGCATGTTGCATTATTTTAAGTAACAATTGTTGAAACATTTACCTAGTCAAGTACCAAT GATATAACATATAGATTGTGCTGGATCTGTTCTTTCAGTTTGTTACATCTTCCGATCTTCCTGT ATAATAGCTCCACACATCTTCCTTTAAAGCTGTATTCAATATATGACGGTAATAGAGATTGCAA CAACTATTAATGTCTATATTTCTAATATTGTCTTTAAAACAGTAAAATGATAAGTTATTTTGTT AATGTGGCATCAACAAAATTATAATTTCAGCATGAGATACGCTTGTCATGAGCTATGTAACATT TAATGAAACATTCTGAGCAGAATATTCGAAAGGAAATTATTTGCCGATAGCTTCATATGCTTCT TTACATATACATCTGTTTTGAAATTTTGCGTCATTTCTCTCACATATTGCACTTGCATCATTTC TCCCTCACATATTGCCCTTCAACTATTTTTCAGGAAGCATCTGGAAATGCTCAAGCTTTTACTA CAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGC ACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACT CAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTG AAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCA AGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCA GTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGG GTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCC ATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTAT CCCTCCCAGGTAGGCGATTCAACTTTTGTAGTCTCTGCAATTGCTATCAAGACATTTCTATACC ACTCTGTAACAAACATTTTCTTGACTCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAA CCATGCACCGTCAAGATACAGATCCTTCCCTGGTATTCTTACTATTTCCATTTGGAATTCTGAT GTTGATCTTTTAGGGTGGTCCTGAGAATTAGGCAGAGACGTCGTGCATTTGTTGATAAACAAGG TCCTATTTTTTGCGAAAAGGAGTTTCTTAGGTTCAGCCACCAACAGACAAAAATGAGAACTCTT CAAAACATTAAAAGACAATGAAGTTAAGGTTTAGGGCTGTAATTTTGTTTCTAGCACTTGGCAT TCTGGCTTGCTATACTATCTGTATGACCATATGAGTTTGTTGTGCTTTACTGCCTGTGATGTAG TAAGTTAACTTTGTTTGTTTTAGATTATATATGCTGTTGACTATGATTTTACAAACTCAAGTAT AGGTGCACTCATTAATTCATTATGGCTTGTACACTTTCTCACTTAAACGAGTTCTCAAATATTT TGCCTAGATAATTGTTATGTAAAGTGTAACTTAATTTCCATAGTGGAAATTGCAATCGAATTCC GTAAGAACGTTAAAAAGCTTTTGTTCTTTGCAAAGTTGAGTATAGCATAAAAACTTTACTATGC TTAACTGTATCTCCATCCTGAAGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGA AACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAG AGGAGATTGCTATGAAGTGTGGTTCTAAGGTAGTTTTGAACATTCAGGTCGCACCATACAATCC AGTTTATAATCATTGACACTTTTCATTGTTTTTAGGTGGAGTACAGGTCAGCACTATGTGATAC TGCGGATTTACAGTTCTCAATCGAGGTAGATTGGAACTTCTATTCAATGTTTATTATTGGTATC TCTGCAGTAAATTTAGTTCCAAAAAATCAGAGCTCCTCTCCTGGACTTGTTGAAAATTGTAAGC TTACCTTATTTATATCCCTTTCTTATGTCTATTACCTCTTTCAGGTTTGGATTGTTGGAGAAAA AGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTA AGAAATTTAGCTA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.122269703

Conservation Information
Conserved circRNAs	NA
PMCS	0.122269703

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							25628725-25628770(+)
25628783-25632947(-)
						
						Potential amino acid sequence
						
							MTSRRNLTNHACFWGYKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRK
LSNETDPQRINGMIAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPELVPPLSDNHQPMTRPV
IRLQEKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRL
LDPDSRLINSVQLNDRMVCVKSGLRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRVHVVP
AFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVFYEDEINEIPSAPDVG
NYLISEDENVAAVNGNRDPLAFDGMADAEVERRMKEASGNAQAFTTTAANFVMPVLPGQNFVSS
SVAPVAPSLGMVPLSNNQGPPPFTQPVAQLSLSDPLQGSPAREEGEVPESELDPDTRRRLLILQ
HGQDTRDPTPPLPAVPPVQVPVPPVQPHGNWFPVEDGMNPNNLNRGSAGFPLESETMHYDKKQL
PHPFFHGGENPISSDRFSYQNQRYPSQLPHSEDHRVLQNHAPSRYRSFPGEELATRHVSSSQRN
NQIVPGQHFARHAGSSAGILEEIAMKCGSKVEYRSALCDTADLQFSIEVWIVGEKVGEGIGRTR
KEAQCQAAEISLRNLANCSCSTRRGRIAFSGNDIQEKPDKSRMFLGI*(+)
MALYIPRNMRDLSGFSWMSLPLNAILPLLVEQLQLAKFLNEISAA*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	25628725-25628770(+) 25628783-25632947(-)
Potential amino acid sequence	MTSRRNLTNHACFWGYKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRK LSNETDPQRINGMIAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPELVPPLSDNHQPMTRPV IRLQEKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRL LDPDSRLINSVQLNDRMVCVKSGLRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRVHVVP AFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVFYEDEINEIPSAPDVG NYLISEDENVAAVNGNRDPLAFDGMADAEVERRMKEASGNAQAFTTTAANFVMPVLPGQNFVSS SVAPVAPSLGMVPLSNNQGPPPFTQPVAQLSLSDPLQGSPAREEGEVPESELDPDTRRRLLILQ HGQDTRDPTPPLPAVPPVQVPVPPVQPHGNWFPVEDGMNPNNLNRGSAGFPLESETMHYDKKQL PHPFFHGGENPISSDRFSYQNQRYPSQLPHSEDHRVLQNHAPSRYRSFPGEELATRHVSSSQRN NQIVPGQHFARHAGSSAGILEEIAMKCGSKVEYRSALCDTADLQFSIEVWIVGEKVGEGIGRTR KEAQCQAAEISLRNLANCSCSTRRGRIAFSGNDIQEKPDKSRMFLGI(+) MALYIPRNMRDLSGFSWMSLPLNAILPLLVEQLQLAKFLNEISAA(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os02g0639000_circ_g.1

Address

Any questions?

Supported by