Splice junction sequence |
TCATTGTGTGCAAAAAAGACGACTGATCTCCCCCTGCAAATGTGTACGGAGGAAGCCTATGATT GGTATTACAACTCGTATTGATGAGCACTACACCATGgctgcgtgtgcgcggaggaaaggaatct ttatggagccaaaatttcgcagagataggaatggaatccttacgaagccaaaatttcgcagaga ggaggata
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 198 Transcript exons: 41510306-41510418,41512928-41513012 GCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAA TCCTTACGAAGCCAAAATTTCGCAGAGAGGAGGATATCTGTTTGAGGAAAAGACGACTGATCTC CCCCTGCAAATGTGTACGGAGGAAGCCTATGATTGGTATTACAACTCGTATTGATGAGCACTAC ACCATG
Transcript length: 203 Transcript exons: 41510306-41510357,41512862-41513012 GCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGGGAAACCCATGA TGCCAAAATTTTGCAGATAGGAGATGGAGGAGATTCAGTTCATTGTGTGCAAAAAAGACGACTG ATCTCCCCCTGCAAATGTGTACGGAGGAAGCCTATGATTGGTATTACAACTCGTATTGATGAGC ACTACACCATG
Transcript length: 240 Transcript exons: 41510306-41510392,41512860-41513012 GCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAA TCCTTACGAAGCCAAAATTTCGCAAGGAAACCCATGATGCCAAAATTTTGCAGATAGGAGATGG AGGAGATTCAGTTCATTGTGTGCAAAAAAGACGACTGATCTCCCCCTGCAAATGTGTACGGAGG AAGCCTATGATTGGTATTACAACTCGTATTGATGAGCACTACACCATG
Transcript length: 248 Transcript exons: 41510306-41510403,41512863-41513012 GCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAA TCCTTACGAAGCCAAAATTTCGCAGAGAGGAGGAGAAACCCATGATGCCAAAATTTTGCAGATA GGAGATGGAGGAGATTCAGTTCATTGTGTGCAAAAAAGACGACTGATCTCCCCCTGCAAATGTG TACGGAGGAAGCCTATGATTGGTATTACAACTCGTATTGATGAGCACTACACCATG
Transcript length: 253 Transcript exons: 41510306-41510362,41511115-41511174,41512877-41513012 GCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGTGATGTT ACCGTTTGATGTGACGTACCTTAGTTTGTACGCGAGATTCAACAAGATGAAGGCAAAATTTTGC AGATAGGAGATGGAGGAGATTCAGTTCATTGTGTGCAAAAAAGACGACTGATCTCCCCCTGCAA ATGTGTACGGAGGAAGCCTATGATTGGTATTACAACTCGTATTGATGAGCACTACACCATG
Transcript length: 291 Transcript exons: 41510306-41510417,41512825-41512925,41512935-41513012 GCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAA TCCTTACGAAGCCAAAATTTCGCAGAGAGGAGGATATCTGTTTGAGGAGGCCGGTGGGCAAGGC GTCACTTATTTGCGGAGGAAAGGAAACCCATGATGCCAAAATTTTGCAGATAGGAGATGGAGGA GATTCAGTTCATTGTGTGCAACTGATCTCCCCCTGCAAATGTGTACGGAGGAAGCCTATGATTG GTATTACAACTCGTATTGATGAGCACTACACCATG
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Genomic sequence |
GCTGCGTGTGCGCGGAGGAAAGGAATCTTTATGGAGCCAAAATTTCGCAGAGATAGGAATGGAA TCCTTACGAAGCCAAAATTTCGCAGAGAGGAGGATATCTGTTTGAGGAAAAAAAGGACGGGGTC TCCCTTCCTGCAACAGAGTACGGATGAAGTCCAACATATGATTAGTGAAGTACTACTAGTAGCC TATTTGCTCTGCTTTCATTTCTTCTCTGGTGTTTGATTGATTGGGTGTGTTGATGATTTCTCAT CGTTTCAAGATCCAGATGTGGTGCACCTACAGATGCAGTCTAGTTGCAAACCCTAGCTGCTAGG CTGTGTTTAGTTCACGTCAAAATTGAAAGTTTGGTTGAAATTGGAACGATGTGACGGGAAAGTT GTAAGTCTATGTGTGTAGGAAAGTTTTGATGTGATCGAAAAAGTTGAGATTTTAAAGAAAAATT TTGAAACTAAACACAGCCCTAGTATCAGATCGTTAGTGTTTAATACTACTACTATTTCTTCTCG CCCGGCGGTTTTATTTTTTTGCTTTCATTTGGTTGCTCAGTTGGACCGATGGATTTGCCGATTC ATATTCAACATTATTATAAGTACTACTCCAAGCATGGCAACAATCAGTCTGATTGGTTGGTCGG CTGGATTGATTGAGCTGTGGTCTGTGGATTATTATTATCATTATCCTATTTTTACTTGTAACCT ATATTTCCCCTGGTTTACATACACAGCCAGTGCGCTTTTAGCAGTATGTTTTACATGCTTTACT TTACATTAATCGTAATTTTTTTTTTTTTGCAGACCGCGTGATGATGTTACCGTTTGATGTGACG TACCTTAGTTTGTACGCGAGATTCAACAAGATGAAGGTAATTAAACGAATTACTTCTCTTGTGC TATGTCTACTACTCCTGTAGTACATGTGTTGCACTGTATTGCACTGTATTGACCCAGTAATTGG ATTGTGAATACGCTCCATATGGGGCGTCCAATCTGGGGGACAAAAACAGGCGCCCCACATAGCT ATTCATTCACTCATTTCTCTCTCCCGTATCTCACTCATCTCTCTAACTTATCTTCCTGCTCGTT TTCTCTCCTCTACTTTACTCTTTCTCTCTCTCACCAAGGCTTTGATGTGAGGACGAGGGCGCAG CGTCCCCGTCACTACTTAAAAAAACGATTTTTCATGACGACACCCTTTTATTTTTGCCGGCGGA TTAATGAAACAAACGCTAGTAAAAACATATGGGAGGATTCTCGCTCATGAGCCGCCAGCGAAAA CCGATTTTCGCTAGCGGAAACTTAGGAGGTACGTCATAAAAAATAACACTATTTTTTAGGCGGA CCTCTTAAGTGTGGCGGTAGAGCACCGCTCGTAAAAAAAAATAAATCCCATTGCCCCACCACCC ACAGCCCACCGCTCCTAACTACCCACCGCGCATTGGTTTCAATTTTCGCAAACAGTATTCTGAC CGCTTGTGGAAAGTAAGGATTTTCACTGGCCTTTACCTGCTGGCGCGCCTGTGCAAATGTTTTT AGGCCGTCAGTAAAAATGTTTTTTCTAGTAGTGCGTAGCACCGCCACCGAAGATGGCGATGGAG AGGACGCCCGCAGCAGCGGCAAAGAGGAGGCGTGGGGCAGCCCATCGTGGCTAAGGAAGTTGAA GTACGTATCACCGGGTCATCGCGTTGCAGCACTTGAGGTTGTCGAAGGAAGCCTGATCCAACTA ACGGAGAGGAGGAAGAAGCCAGACCTAGCCAGCATTGATTTTGTGAAATTTCCAGTGTTTCAGT CAATGCATTTTTGATGTTTCTTTTGTTGGATTGAAATGTTGTACCAAGTATTTTAATGTTGTTT CATTATTTTGTCTTCGATTCATTGCAGATGTGTAGATATTTTTGATTCACTGCAGATGTGTTGA TATTTCACCAAATTGAATTTGAATGTTTTGTGTGAGACCAAAATGTTTCAGGCCTAAGGCCCTA ATTGTAGTGTATTTTTATCACTATTTCTTTCATTTAGCTCGCAATCTAAGGCTTTAAAATTCAT TAGGTGGAACGTCTTGTTTTTGCTGTTTAAGGGCATTAGCATTGCGATGCATTGTGTGCACGTA CTACTATGCATCTATGCCACACGGGTTGGGTGCTTTTTTATACAACTAGTAACATGTAAAAGTG ATAAGGGCTTAGTATCACATTCCTTGCTGTGATAATTGCAAATCAAACCTTGTATTTTTCGTGG GCTGTCCTACAGCAGACAATTCCATACTATGGTACGGTGCGCTCGCTCATAGACGGGTATCAAT TTGATTTGTTGTTTTTACGATGCTGAACAATTTTATCTATCTGAGTTCCACCGCATAAATATGT AAATAGAGATGTTATATCTGTGGATGGGTAACCAACGACCACTTCCATTCACGTGAAGAGTTAA ACTAAGTTTAAATTGTACTGTCATGCATCAAAATTAATTGATCCCCCATTACGTGACACCACTT TGAATCTTCTATCATGCCGCAGGGGCCGGTGGGCAAGGCGTCACTTATTTGCGGAGGAAAGGAA ACCCATGATGCCAAAATTTTGCAGATAGGAGATGGAGGAGATTCAGTTCATTGTGTGCAAAAAA GACGACTGATCTCCCCCTGCAAATGTGTACGGAGGAAGCCTATGATTGGTATTACAACTCGTAT TGATGAGCACTACACCATG |