Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d017261_circ_g.1 |
ID in PlantcircBase | zma_circ_002109 |
Alias | circ979 |
Organism | Zea mays |
Position | chr5: 190814828-190815662 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d017261 |
Parent gene annotation |
Casein kinase 1-like protein 6 |
Parent gene strand | + |
Alternative splicing | Zm00001d017261_circ_g.2 |
Support reads | 5 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d017261_T011:1 Zm00001d017261_T010:2 Zm00001d017261_T008:2 Zm00001d017261_T019:1 Zm00001d017261_T015:1 Zm00001d017261_T013:2 Zm00001d017261_T005:2 Zm00001d017261_T003:1 Zm00001d017261_T016:2 Zm00001d017261_T001:2 Zm00001d017261_T009:1 Zm00001d017261_T021:2 Zm00001d017261_T012:1 Zm00001d017261_T006:2 Zm00001d017261_T007:2 Zm00001d017261_T002:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.179339002 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |