Plant Circular RNA Database

Detail information of Os08g0478500_circ_g.5

			
						 General Information
					
						CircRNA Name
						Os08g0478500_circ_g.5
					
						ID in PlantcircBase
						osa_circ_037354
					
						Alias
						Os_ciR11495
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 23596474-23598919  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os08g0478500						
					
						Parent gene annotation
						
							Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family pr
otein. (Os08t0478500-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os08g0478500_circ_g.4 Os08g0478500_circ_g.6 Os08g0478500_circ_g.7 Os08g0478500_circ_g.8 						
					
						Support reads
						2/1
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0478500-01:6

General Information
CircRNA Name	Os08g0478500_circ_g.5
ID in PlantcircBase	osa_circ_037354
Alias	Os_ciR11495
Organism	Oryza sativa
Position	chr8: 23596474-23598919 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os08g0478500
Parent gene annotation	Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family pr otein. (Os08t0478500-01)
Parent gene strand	-
Alternative splicing	Os08g0478500_circ_g.4 Os08g0478500_circ_g.6 Os08g0478500_circ_g.7 Os08g0478500_circ_g.8
Support reads	2/1
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0478500-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGAAAGTTCAGCCACATCATCATGATTAGCATCAGTGCTTGGTGGGCGGCATTCATTTTTATGA
CCCTGTCTCCAGTGGGCTATCTGGCATTTGAAGGAActgctgcatttatatttattatctccat
ccaagacttctgtagatgtaaatcgctcaagtgctccttccagtgaactgatgtcgccatctat
ttcaacag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1473
Transcript exons: 23596474-23596631,23596747-23596867,23597323-23597485,23
597572-23597657,23597902-23597984,23598058-23598919
CTGCTGCATTTATATTTATTATCTCCATCCAAGACTTCTGTAGATGTAAATCGCTCAAGTGCTC
CTTCCAGTGAACTGATGTCGCCATCTATTTCAACAGTAAGATCCAAAATACGCTCATGTTGCTC
GGAAGTAGCATCACATCTTGTGCATCTTATCTTAGATCGCAGATAGCCCCCAAATATTAATTGC
ATAAGTGTTGTTTCTTCGTGTAACCGATGAGTGCCGCTTTTCCTGGCTTCCTTCATGCATACAG
ATTGCATAGCATCAATGGCGTACCTAAGGAATTCATGAGCATCTTCTTGTTTACCAGGACCAAA
GCTACTTCCAATGTCAGGCAAATGAGAGAGTATCCCAGTTGGTGACAAAGCAATCTTGCCTTGT
CTGCCCTCCCCAACGAGTTTTTCAAATTCACACATGAAGCACCATTCCTTTTTGGAACAATTTT
TTGAATGAAGCCCTCCCAAAAGATATGATGTAAGTGGTCGGGTAAACATTAAGCACTGAAGAAC
AGCATTTGCATAGCAACTATTGCCAAGGTTATGAAGACCAAACGGTTGCAATTCAACCTTTTCA
TAGAGCTTAATGAAAAGCTCATATGGAAAATGTGTTGGCTCTGATGGATAATGCCTCACAACTT
TTGGTGCTGTTTGCTGCCTGACAATTTTTTTCAGAGATGTTGCCAGGCTATTTGCTGTTGAAAT
TGATTTCTCTGATGGTTTAGAATTCCTTTCAGCAATATTATCAGCCCTTTTTGATGAATTAGGT
GTAACAGAACGTCCACCGGGAACAGGAGAAACTTTATCAACAGTCAAAACAGATGGCACCATTT
TTGACACACCAATGTTGTCTGAGCCAGCAGCTTTTGTCTTGGAGTGTCCAACTTCCACATGAAG
AGCAGTCCTGGAAGTTTTAGGTTCTACTGCAACAGGTAGAGCAGCTTGAGCATTGTTGTTATCT
GCATATTTTTTGCTGTTACTAGTTTGAGAGCAATCCTGGTGCTTCTTGGAATCAATTAAGGACT
CTTTGTTGATAAGACTTCCAGAGCCACTAATCTTTGGTGGAGAAGGTTGAAATCTACACACCAA
CGCCTCATCTAAGTCCTTTGTGTAAGAACCATTTTCAACAGGAGTTGTAGGTTTCATATTTGAT
TCTGTCTTTCTACTGCCAAGAGAAGCTACTTGTGAAGAACTTTGAGGGAGTTTGACCGCACTGA
CAGAATGGTCATCATCAGGAACCTCCACCGAAGCAAGTACTTCTGAGGGCATATCTTTTGTTTT
ATCATTTAAATTCTTCACGGTGGCTGCCGTGTTGGTTTCAGCTATGTTTTCTTCAGAAGCACTT
GTCTGCTCAATTTTCCTTTCCTTTGCAACAGAAAGTTCAGCCACATCATCATGATTAGCATCAG
TGCTTGGTGGGCGGCATTCATTTTTATGACCCTGTCTCCAGTGGGCTATCTGGCATTTGAAGGA
A
						
					

						Genomic sequence
						
							CTGCTGCATTTATATTTATTATCTCCATCCAAGACTTCTGTAGATGTAAATCGCTCAAGTGCTC
CTTCCAGTGAACTGATGTCGCCATCTATTTCAACAGTAAGATCCAAAATACGCTCATGTTGCTC
GGAAGTAGCATCACATCTTGTGCATCTTATCTAGAAGAAGGAAAAAAGCAGTCAATAGGAGTGG
GGCTTCATTACACAGCTGATCTCAGGTAATTGAGTACAAACAACAGAAATTTAAACTTGTTCTG
TGAACTGTGAAGAAAACCTTAGATCGCAGATAGCCCCCAAATATTAATTGCATAAGTGTTGTTT
CTTCGTGTAACCGATGAGTGCCGCTTTTCCTGGCTTCCTTCATGCATACAGATTGCATAGCATC
AATGGCGTACCTACAACAGATCAGGTAGTGCGGTTCCATCAGACACTATTGTTGAAAAGAACTG
GTTGAGCACAATTAACTAAGCTAATTCAAAACAAGGACATTGGCAATGCCAATTCATACCCAAA
ATAATATGTTTAGGTTGTTTCTACCAGGATTACAACATTATACTGATGCAAACCACCACCAAAA
CTCCGAATCCAGATGATAGGGAAAAAGGTTGTCATTGCTCATTAGATTCTTCATGCAGACCACA
GACCACAGAACCTAATAAGCACTCCGGCTACCACTCAAATATTCAAGTAGGCCTATTAACTTTA
ATTTTCTGCATGAATATGTGATATGATACCCCCGCTCTTATCCCCCAGTGCATTCCTCGTTGAG
GCACATAAATGTTCCTAACTTCTGCTAAACTAATTCTTAACTTCTTAAACTGGAAACTGTCAAT
TAAAAAAAATAACTTACCTAAGGAATTCATGAGCATCTTCTTGTTTACCAGGACCAAAGCTACT
TCCAATGTCAGGCAAATGAGAGAGTATCCCAGTTGGTGACAAAGCAATCTTGCCTTGTCTGCCC
TCCCCAACGAGTTTTTCAAATTCACACATGAAGCACCATTCCTTTTTGGAACCTAGAGAGTATG
ATATATTAAATAATTACTCAAAGAAATGCTTTATGGGAAACAATGATGTAATAAACACAGTAAT
AGAACATTACAATTTTTTGAATGAAGCCCTCCCAAAAGATATGATGTAAGTGGTCGGGTAAACA
TTAAGCACTGAAGAACAGCATTTGCATAGCAACTGCAAGAGAGAGGAAAAAACAAGGTGAAACA
GGGTGAACACAGAACACTGTACTAAGCTAATTCCTGCATAAACACCACAAATTATCATAAAATT
CGATGCAAGCTGTGATATGTAGCCTGATAGCCACAAAAGGATGGGGAGAGCTAAGTTATAAATC
TTAGAGAAATGCTAAAATAATGAGATAAGCAAAAAAGAAACACATATATGTGTTCCAACTATCC
AGAAATAATCCAAAACTTACCTATTGCCAAGGTTATGAAGACCAAACGGTTGCAATTCAACCTT
TTCATAGAGCTTAATGAAAAGCTCATATGGAAAATGTGTCTGAAAAAAATAAAACTATTAGCAG
ATAGAAAACTCCTACTAACTATAAACACAGCAGTTCAGTTTTGCTTACTGGCTCTGATGGATAA
TGCCTCACAACTTTTGGTGCTGTTTGCTGCCTGACAATTTTTTTCAGAGATGTTGCCAGGCTAT
TTGCTGTTGAAATTGATTTCTCTGATGGTTTAGAATTCCTTTCAGCAATATTATCAGCCCTTTT
TGATGAATTAGGTGTAACAGAACGTCCACCGGGAACAGGAGAAACTTTATCAACAGTCAAAACA
GATGGCACCATTTTTGACACACCAATGTTGTCTGAGCCAGCAGCTTTTGTCTTGGAGTGTCCAA
CTTCCACATGAAGAGCAGTCCTGGAAGTTTTAGGTTCTACTGCAACAGGTAGAGCAGCTTGAGC
ATTGTTGTTATCTGCATATTTTTTGCTGTTACTAGTTTGAGAGCAATCCTGGTGCTTCTTGGAA
TCAATTAAGGACTCTTTGTTGATAAGACTTCCAGAGCCACTAATCTTTGGTGGAGAAGGTTGAA
ATCTACACACCAACGCCTCATCTAAGTCCTTTGTGTAAGAACCATTTTCAACAGGAGTTGTAGG
TTTCATATTTGATTCTGTCTTTCTACTGCCAAGAGAAGCTACTTGTGAAGAACTTTGAGGGAGT
TTGACCGCACTGACAGAATGGTCATCATCAGGAACCTCCACCGAAGCAAGTACTTCTGAGGGCA
TATCTTTTGTTTTATCATTTAAATTCTTCACGGTGGCTGCCGTGTTGGTTTCAGCTATGTTTTC
TTCAGAAGCACTTGTCTGCTCAATTTTCCTTTCCTTTGCAACAGAAAGTTCAGCCACATCATCA
TGATTAGCATCAGTGCTTGGTGGGCGGCATTCATTTTTATGACCCTGTCTCCAGTGGGCTATCT
GGCATTTGAAGGAA
						
					

			
		

Sequences
Splice junction sequence	AGAAAGTTCAGCCACATCATCATGATTAGCATCAGTGCTTGGTGGGCGGCATTCATTTTTATGA CCCTGTCTCCAGTGGGCTATCTGGCATTTGAAGGAActgctgcatttatatttattatctccat ccaagacttctgtagatgtaaatcgctcaagtgctccttccagtgaactgatgtcgccatctat ttcaacag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1473 Transcript exons: 23596474-23596631,23596747-23596867,23597323-23597485,23 597572-23597657,23597902-23597984,23598058-23598919 CTGCTGCATTTATATTTATTATCTCCATCCAAGACTTCTGTAGATGTAAATCGCTCAAGTGCTC CTTCCAGTGAACTGATGTCGCCATCTATTTCAACAGTAAGATCCAAAATACGCTCATGTTGCTC GGAAGTAGCATCACATCTTGTGCATCTTATCTTAGATCGCAGATAGCCCCCAAATATTAATTGC ATAAGTGTTGTTTCTTCGTGTAACCGATGAGTGCCGCTTTTCCTGGCTTCCTTCATGCATACAG ATTGCATAGCATCAATGGCGTACCTAAGGAATTCATGAGCATCTTCTTGTTTACCAGGACCAAA GCTACTTCCAATGTCAGGCAAATGAGAGAGTATCCCAGTTGGTGACAAAGCAATCTTGCCTTGT CTGCCCTCCCCAACGAGTTTTTCAAATTCACACATGAAGCACCATTCCTTTTTGGAACAATTTT TTGAATGAAGCCCTCCCAAAAGATATGATGTAAGTGGTCGGGTAAACATTAAGCACTGAAGAAC AGCATTTGCATAGCAACTATTGCCAAGGTTATGAAGACCAAACGGTTGCAATTCAACCTTTTCA TAGAGCTTAATGAAAAGCTCATATGGAAAATGTGTTGGCTCTGATGGATAATGCCTCACAACTT TTGGTGCTGTTTGCTGCCTGACAATTTTTTTCAGAGATGTTGCCAGGCTATTTGCTGTTGAAAT TGATTTCTCTGATGGTTTAGAATTCCTTTCAGCAATATTATCAGCCCTTTTTGATGAATTAGGT GTAACAGAACGTCCACCGGGAACAGGAGAAACTTTATCAACAGTCAAAACAGATGGCACCATTT TTGACACACCAATGTTGTCTGAGCCAGCAGCTTTTGTCTTGGAGTGTCCAACTTCCACATGAAG AGCAGTCCTGGAAGTTTTAGGTTCTACTGCAACAGGTAGAGCAGCTTGAGCATTGTTGTTATCT GCATATTTTTTGCTGTTACTAGTTTGAGAGCAATCCTGGTGCTTCTTGGAATCAATTAAGGACT CTTTGTTGATAAGACTTCCAGAGCCACTAATCTTTGGTGGAGAAGGTTGAAATCTACACACCAA CGCCTCATCTAAGTCCTTTGTGTAAGAACCATTTTCAACAGGAGTTGTAGGTTTCATATTTGAT TCTGTCTTTCTACTGCCAAGAGAAGCTACTTGTGAAGAACTTTGAGGGAGTTTGACCGCACTGA CAGAATGGTCATCATCAGGAACCTCCACCGAAGCAAGTACTTCTGAGGGCATATCTTTTGTTTT ATCATTTAAATTCTTCACGGTGGCTGCCGTGTTGGTTTCAGCTATGTTTTCTTCAGAAGCACTT GTCTGCTCAATTTTCCTTTCCTTTGCAACAGAAAGTTCAGCCACATCATCATGATTAGCATCAG TGCTTGGTGGGCGGCATTCATTTTTATGACCCTGTCTCCAGTGGGCTATCTGGCATTTGAAGGA A
Genomic sequence	CTGCTGCATTTATATTTATTATCTCCATCCAAGACTTCTGTAGATGTAAATCGCTCAAGTGCTC CTTCCAGTGAACTGATGTCGCCATCTATTTCAACAGTAAGATCCAAAATACGCTCATGTTGCTC GGAAGTAGCATCACATCTTGTGCATCTTATCTAGAAGAAGGAAAAAAGCAGTCAATAGGAGTGG GGCTTCATTACACAGCTGATCTCAGGTAATTGAGTACAAACAACAGAAATTTAAACTTGTTCTG TGAACTGTGAAGAAAACCTTAGATCGCAGATAGCCCCCAAATATTAATTGCATAAGTGTTGTTT CTTCGTGTAACCGATGAGTGCCGCTTTTCCTGGCTTCCTTCATGCATACAGATTGCATAGCATC AATGGCGTACCTACAACAGATCAGGTAGTGCGGTTCCATCAGACACTATTGTTGAAAAGAACTG GTTGAGCACAATTAACTAAGCTAATTCAAAACAAGGACATTGGCAATGCCAATTCATACCCAAA ATAATATGTTTAGGTTGTTTCTACCAGGATTACAACATTATACTGATGCAAACCACCACCAAAA CTCCGAATCCAGATGATAGGGAAAAAGGTTGTCATTGCTCATTAGATTCTTCATGCAGACCACA GACCACAGAACCTAATAAGCACTCCGGCTACCACTCAAATATTCAAGTAGGCCTATTAACTTTA ATTTTCTGCATGAATATGTGATATGATACCCCCGCTCTTATCCCCCAGTGCATTCCTCGTTGAG GCACATAAATGTTCCTAACTTCTGCTAAACTAATTCTTAACTTCTTAAACTGGAAACTGTCAAT TAAAAAAAATAACTTACCTAAGGAATTCATGAGCATCTTCTTGTTTACCAGGACCAAAGCTACT TCCAATGTCAGGCAAATGAGAGAGTATCCCAGTTGGTGACAAAGCAATCTTGCCTTGTCTGCCC TCCCCAACGAGTTTTTCAAATTCACACATGAAGCACCATTCCTTTTTGGAACCTAGAGAGTATG ATATATTAAATAATTACTCAAAGAAATGCTTTATGGGAAACAATGATGTAATAAACACAGTAAT AGAACATTACAATTTTTTGAATGAAGCCCTCCCAAAAGATATGATGTAAGTGGTCGGGTAAACA TTAAGCACTGAAGAACAGCATTTGCATAGCAACTGCAAGAGAGAGGAAAAAACAAGGTGAAACA GGGTGAACACAGAACACTGTACTAAGCTAATTCCTGCATAAACACCACAAATTATCATAAAATT CGATGCAAGCTGTGATATGTAGCCTGATAGCCACAAAAGGATGGGGAGAGCTAAGTTATAAATC TTAGAGAAATGCTAAAATAATGAGATAAGCAAAAAAGAAACACATATATGTGTTCCAACTATCC AGAAATAATCCAAAACTTACCTATTGCCAAGGTTATGAAGACCAAACGGTTGCAATTCAACCTT TTCATAGAGCTTAATGAAAAGCTCATATGGAAAATGTGTCTGAAAAAAATAAAACTATTAGCAG ATAGAAAACTCCTACTAACTATAAACACAGCAGTTCAGTTTTGCTTACTGGCTCTGATGGATAA TGCCTCACAACTTTTGGTGCTGTTTGCTGCCTGACAATTTTTTTCAGAGATGTTGCCAGGCTAT TTGCTGTTGAAATTGATTTCTCTGATGGTTTAGAATTCCTTTCAGCAATATTATCAGCCCTTTT TGATGAATTAGGTGTAACAGAACGTCCACCGGGAACAGGAGAAACTTTATCAACAGTCAAAACA GATGGCACCATTTTTGACACACCAATGTTGTCTGAGCCAGCAGCTTTTGTCTTGGAGTGTCCAA CTTCCACATGAAGAGCAGTCCTGGAAGTTTTAGGTTCTACTGCAACAGGTAGAGCAGCTTGAGC ATTGTTGTTATCTGCATATTTTTTGCTGTTACTAGTTTGAGAGCAATCCTGGTGCTTCTTGGAA TCAATTAAGGACTCTTTGTTGATAAGACTTCCAGAGCCACTAATCTTTGGTGGAGAAGGTTGAA ATCTACACACCAACGCCTCATCTAAGTCCTTTGTGTAAGAACCATTTTCAACAGGAGTTGTAGG TTTCATATTTGATTCTGTCTTTCTACTGCCAAGAGAAGCTACTTGTGAAGAACTTTGAGGGAGT TTGACCGCACTGACAGAATGGTCATCATCAGGAACCTCCACCGAAGCAAGTACTTCTGAGGGCA TATCTTTTGTTTTATCATTTAAATTCTTCACGGTGGCTGCCGTGTTGGTTTCAGCTATGTTTTC TTCAGAAGCACTTGTCTGCTCAATTTTCCTTTCCTTTGCAACAGAAAGTTCAGCCACATCATCA TGATTAGCATCAGTGCTTGGTGGGCGGCATTCATTTTTATGACCCTGTCTCCAGTGGGCTATCT GGCATTTGAAGGAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.326849932

Conservation Information
Conserved circRNAs	NA
PMCS	0.326849932

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							23598842-23596544(+)
23598716-23596476(-)
23596563-23598902(-)
						
					

						Potential amino acid sequence
						
							MISISAWWAAFIFMTLSPVGYLAFEGTAAFIFIISIQDFCRCKSLKCSFQ*(+)
MPSEVLASVEVPDDDHSVSAVKLPQSSSQVASLGSRKTESNMKPTTPVENGSYTKDLDEALVCR
FQPSPPKISGSGSLINKESLIDSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRTALHVE
VGHSKTKAAGSDNIGVSKMVPSVLTVDKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSISTA
NSLATSLKKIVRQQTAPKVVRHYPSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQC
LMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQGKIALSPTGILSHLPDIGSSFGPG
KQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQHE
RILDLTVEIDGDISSLEGALERFTSTEVLDGDNKYKCSSSFKCQIAHWRQGHKNECRPPSTDAN
HDDVAELSVAKERKIEQTSASEENIAETNTAATVKNLNDKTKDMPSEVLASVEVPDDDHSVSAV
KLPQSSSQVASLGSRKTESNMKPTTPVENGSYTKDLDEALVCRFQPSPPKISGSGSLINKESLI
DSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRTALHVEVGHSKTKAAGSDNIGVSKMVP
SVLTVDKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSISTANSLATSLKKIVRQQTAPKVVR
HYPSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCS
KKEWCFMCEFEKLVGEGRQGKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM
KEARKSGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALE
RFTSTEVLDGDNKYKCSSSFKCQIAHWRQGHKNECRPPSTDANHDDVAELSVAKERKIEQTSAS
EENIAETNTAATVKNLNDKTKDMPSEVLASVEVPDDDHSVSAVKLPQSSSQVASLGSRKTESNM
KPTTPVENGSYTKDLDEALVCRFQPSPPKISGSGSLINKESLIDSKKHQDCSQTSNSKKYADNN
NAQAALPVAVEPKTSRTALHVEVGHSKTKAAGSDNIGVSKMVPSVLTVDKVSPVPGGRSVTPNS
SKRADNIAERNSKPSEKSISTANSLATSLKKIVRQQTAPKVVRHYPSEPTHFPYELFIKLYEKV
ELQPFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQGK
IALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLMQLI
FGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLDGDNKYKCSSSFK
CQIAHWRQGHKNECRPPSTDANHDDVAELSVAKERKIEQTSASEENIAETNTAATVKNLNDKTK
DMPSEVLASVEVPDDDHSVSAVKLPQSSSQVASLGSRKTESNMKPTTPVENGSYTKDLDEALVC
RFQPSPPKISGSGSLINKESLIDSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRTALHV
EVGHSKTKAAGSDNIGVSKMVPSVLTVDKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSIST
ANSLATSLKKIVRQQTAPKVVRHYPSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQ
CLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQGKIALSPTGILSHLPDIGSSFGP
GKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQH
ERILDLTVEIDGDISSLEGALERFTSTEVLDGDNKYKCS(-)
MATSVHWKEHLSDLHLQKSWMEIININAAVPSNAR*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	23598842-23596544(+) 23598716-23596476(-) 23596563-23598902(-)
Potential amino acid sequence	MISISAWWAAFIFMTLSPVGYLAFEGTAAFIFIISIQDFCRCKSLKCSFQ(+) MPSEVLASVEVPDDDHSVSAVKLPQSSSQVASLGSRKTESNMKPTTPVENGSYTKDLDEALVCR FQPSPPKISGSGSLINKESLIDSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRTALHVE VGHSKTKAAGSDNIGVSKMVPSVLTVDKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSISTA NSLATSLKKIVRQQTAPKVVRHYPSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQC LMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQGKIALSPTGILSHLPDIGSSFGPG KQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQHE RILDLTVEIDGDISSLEGALERFTSTEVLDGDNKYKCSSSFKCQIAHWRQGHKNECRPPSTDAN HDDVAELSVAKERKIEQTSASEENIAETNTAATVKNLNDKTKDMPSEVLASVEVPDDDHSVSAV KLPQSSSQVASLGSRKTESNMKPTTPVENGSYTKDLDEALVCRFQPSPPKISGSGSLINKESLI DSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRTALHVEVGHSKTKAAGSDNIGVSKMVP SVLTVDKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSISTANSLATSLKKIVRQQTAPKVVR HYPSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCS KKEWCFMCEFEKLVGEGRQGKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM KEARKSGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALE RFTSTEVLDGDNKYKCSSSFKCQIAHWRQGHKNECRPPSTDANHDDVAELSVAKERKIEQTSAS EENIAETNTAATVKNLNDKTKDMPSEVLASVEVPDDDHSVSAVKLPQSSSQVASLGSRKTESNM KPTTPVENGSYTKDLDEALVCRFQPSPPKISGSGSLINKESLIDSKKHQDCSQTSNSKKYADNN NAQAALPVAVEPKTSRTALHVEVGHSKTKAAGSDNIGVSKMVPSVLTVDKVSPVPGGRSVTPNS SKRADNIAERNSKPSEKSISTANSLATSLKKIVRQQTAPKVVRHYPSEPTHFPYELFIKLYEKV ELQPFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQGK IALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLMQLI FGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLDGDNKYKCSSSFK CQIAHWRQGHKNECRPPSTDANHDDVAELSVAKERKIEQTSASEENIAETNTAATVKNLNDKTK DMPSEVLASVEVPDDDHSVSAVKLPQSSSQVASLGSRKTESNMKPTTPVENGSYTKDLDEALVC RFQPSPPKISGSGSLINKESLIDSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRTALHV EVGHSKTKAAGSDNIGVSKMVPSVLTVDKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSIST ANSLATSLKKIVRQQTAPKVVRHYPSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQ CLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQGKIALSPTGILSHLPDIGSSFGP GKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQH ERILDLTVEIDGDISSLEGALERFTSTEVLDGDNKYKCS(-) MATSVHWKEHLSDLHLQKSWMEIININAAVPSNAR(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os08g0478500_circ_g.5

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