Splice junction sequence |
AGCTTAAAATCAATGAAAGACAAACCTAGTCCGCAAGATAAAGAGACGCCGGAGGTCTCTGGTC TGAAAACTGCTGGACCTGAGGGGGAGATAACAGCAGattgctgaatacgcgcaacacaatgatg ccatactgctggttatagtgcctgctagccaggcatctgaaatttcatcatcccgagccctgaa gattgcaa
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 1261 Transcript exons: 3372264-3372381,3372528-3372864,3372970-3373117,3373444- 3373545,3373626-3373745,3374013-3374096,3374181-3374308, 3374412-3374496,3374614-3374752 ATTGCTGAATACGCGCAACACAATGATGCCATACTGCTGGTTATAGTGCCTGCTAGCCAGGCAT CTGAAATTTCATCATCCCGAGCCCTGAAGATTGCAAAGGAGTATGATCCAGAGAGTACTAGGAC AATAGGCATTATTGGAAAAATTGACCAGGCAGCAGAGAACTCGAAAGCCCTTGCAGCTGTTCAG GCTCTTCTTTCAAATCAAGGACCTCCAAAAACAACTGACATTCCATGGGTTGCTGTTATTGGCC AATCCGTTTCAATTGCGTCAGCACAGTCTGGAAGTGGTGAGAACTCCTTAGAAACTGCTTGGCG TGCTGAGAGTGAAAGTCTTAAGTCCATTTTGACTGGGGCTCCACAAAGCAAGCTTGGCAGAATT GCGTTGGTGGATACCCTTGCTAGCCAGATTCGTAGCAGAATGAAGCTCAGGCTTCCAAGTGTCC TGTCTGGGCTCCAGGGTAAGTCTCAAATAGTGCAGGATGAGCTAGCGAGGCTTGGTGAACAACT AGTTAACAGTGCTGAAGGTACAAGGGCTATAGCTTTGGAGCTTTGCCGTGAGTTTGAAGACAAG TTTCTTCTGCACTTGGCTGGTGGTGAAGGAAGTGGTTGGAAAGTTGTTGCAAGTTTTGAAGGAA ATTTCCCCAACCGTATCAAGCAGCTTCCATTGGATAGACATTTTGACCTGAACAATGTTAAAAG GGTTGTTTTGGAGGCAGATGGTTATCAACCTTATCTTATATCTCCAGAGAAAGGGTTGAGATCG TTGATAAAGATTGTCCTTGAGTTGGCTAAAGACCCGGCACGCCTTTGTGTTGATGAGGTTCACC GAGTTCTTGTTGACATAGTTTCAGCTTCTGCAAATGCTACACCTGGACTTGGGAGATATCCTCC TTTCAAGCGAGAGGTTGTAGCTATAGCAAGTGCAGCACTTGATGGTTTCAAGAATGAAGCCAAG AAAATGGTGGTTGCACTAGTTGATATGGAACGCGCTTTTGTACCACCTCAACATTTTATCCGTC TTGTGCAAAGGAGAATGGAAAGACAACGTCGCGAGGAAGAGCTGAAAGGGCGATCTTCTAAGAA GGGACAAGATGCAGAGCAGTCCCTTTTAAGCAGGGCTACTAGTCCTCAGCCAGATGGGCCAACA GCTGGTGGTAGCTTAAAATCAATGAAAGACAAACCTAGTCCGCAAGATAAAGAGACGCCGGAGG TCTCTGGTCTGAAAACTGCTGGACCTGAGGGGGAGATAACAGCAG
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Genomic sequence |
ATTGCTGAATACGCGCAACACAATGATGCCATACTGCTGGTTATAGTGCCTGCTAGCCAGGCAT CTGAAATTTCATCATCCCGAGCCCTGAAGATTGCAAAGGAGTATGATCCAGAGAGTGAGTACAT CTGTATTTCCGATCTGTCTTATCTTAATATTGTTTATTATTTGTATACCTGATAAGAACTGTTG ATTTACCTACCTATTATCACTTCAGTTTGCTTAAAATACTCATTAGCTAACATCACTCCTCCCT ACTTATAGGTACTAGGACAATAGGCATTATTGGAAAAATTGACCAGGCAGCAGAGAACTCGAAA GCCCTTGCAGCTGTTCAGGCTCTTCTTTCAAATCAAGGACCTCCAAAAACAACTGACATTCCAT GGGTTGCTGTTATTGGCCAATCCGTTTCAATTGCGTCAGCACAGTCTGGAAGTGGTGAGAACTC CTTAGAAACTGCTTGGCGTGCTGAGAGTGAAAGTCTTAAGTCCATTTTGACTGGGGCTCCACAA AGCAAGCTTGGCAGAATTGCGTTGGTGGATACCCTTGCTAGCCAGATTCGTAGCAGAATGAAGC TCAGGCTTCCAAGTGTCCTGTCTGGGTATTGCTTCTCTCCATATATGTGCTTTCTTCATGATTT TTATTATGGTGTTGGCATATGACATTGGTTGCTTGAACGCATATGGCTTTCAAATTCTTTGTAC AGGCTCCAGGGTAAGTCTCAAATAGTGCAGGATGAGCTAGCGAGGCTTGGTGAACAACTAGTTA ACAGTGCTGAAGGTACAAGGGCTATAGCTTTGGAGCTTTGCCGTGAGTTTGAAGACAAGTTTCT TCTGCACTTGGCTGGTGGTGAAGTAAGTACATTCTTACAAAAGTTAACTAGATTTAGTCGAAAA TTCAAGAATATAGTGAGAGAGAAGAACTCTTCAAATATTAGCAATCAGCCATTTCAGATTTGGT ACTAGTGTAGTGGAAAGTCTCTTGCTAGCCTACGCTTGGTAAGAGCACATTATATTGTTGGGAA TCTCATGAATCTGATAGTGGATGTTTATAATATGTGTATAAGCCAACTGAGTGTTTGATATAGA GTTTTTGTACTTGTCTGTGTTCAGTTTATGGGCTGAAGTCCCTTTTGGAGCTTGGCAAATGTTT TTCTCAAAACTTTTTGATTCTTGTTCAGGGAAGTGGTTGGAAAGTTGTTGCAAGTTTTGAAGGA AATTTCCCCAACCGTATCAAGCAGCTTCCATTGGATAGACATTTTGACCTGAACAATGTTAAAA GGGTGGGTGTCTTCTTCTGTCCTAAGTTTCTGCACGAGACAAGTTTTGAGACTTGATTTGTCAA AATATCTTTGATTTTCAGGTTGTTTTGGAGGCAGATGGTTATCAACCTTATCTTATATCTCCAG AGAAAGGGTTGAGATCGTTGATAAAGATTGTCCTTGAGTTGGCTAAAGACCCGGCACGCCTTTG TGTTGATGAGGTGTGCTTGTTTACATGTTTTTTTAGGTACATGCAGTAGGATTGAATTTTAGAA ATTTACTGCATTGTGAACTGGCTATGGCTTGTCTCACTTTAATTCTTCGAACTGTTATTTAGAG TTCTGTCAAGTTTTCTGGTTTATAAGCCTTAGTAAGTTAATATCCCTTACCGTAGATGTAGCTA TTTTTTGGTTCCTACTTTAAAACTCATGCATCCAGCTTCTGTCTTATTTACGTGTTGAGCTAAC ATGGTCTTAACTTTTGATTAGGTTCACCGAGTTCTTGTTGACATAGTTTCAGCTTCTGCAAATG CTACACCTGGACTTGGGAGATATCCTCCTTTCAAGCGAGAGGTAATAATGATTTTTTGGTGCTT TATTCAGTAATATTTTATCATTTCGGTAACAGTTATTCCTTTCTGACTAATCATCAACCAGGTT GTAGCTATAGCAAGTGCAGCACTTGATGGTTTCAAGAATGAAGCCAAGAAAATGGTGGTTGCAC TAGTTGATATGGAACGCGCTTTTGTACCACCTCAACATTTTATCCGTCTTGTGCAAAGGAGGTA TTTTGGCTTGTCTTTCTTTGCAATTTTTGTTTTTATTTTCAATGGTTCATGACTGAAAATTATT TCTCTTTCTGACGATGCACTGTATTGACTCCATCAGAATGGAAAGACAACGTCGCGAGGAAGAG CTGAAAGGGCGATCTTCTAAGAAGGGACAAGATGCAGAGCAGTCCCTTTTAAGCAGGGTGTGTG TTCATTCTGTATCAATTTGGATATACGTAGTGAAAAATGTTTTTTTTTTTTTTTTATCGTTTTA CATGAAAATATATAATGTGGAAATTCTCTACATATATGTTTATCAGGCTACTAGTCCTCAGCCA GATGGGCCAACAGCTGGTGGTAGCTTAAAATCAATGAAAGACAAACCTAGTCCGCAAGATAAAG AGACGCCGGAGGTCTCTGGTCTGAAAACTGCTGGACCTGAGGGGGAGATAACAGCAG |