Plant Circular RNA Database

Detail information of AT4G33270_circ_g.1

			
						 General Information
					
						CircRNA Name
						AT4G33270_circ_g.1
					
						ID in PlantcircBase
						ath_circ_034384
					
						Alias
						Ath_circ_FC2958, AT4G33270_C1
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 16044793-16046106  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder, circRNA_finder, find_circ, CIRI2
					
						Parent gene
						
							AT4G33270						
					
						Parent gene annotation
						
							Cell division cycle 20.1, cofactor of APC complex
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT4G33250_circ_g.1 AT4G33250_circ_g.2 AT4G33250_circ_g.3 AT4G33250_circ_g.4 4_circ_ag.5 AT4G33260_circ_g.1 AT4G33260_circ_g.2 AT4G33260_circ_g.3 4_circ_ag.4 4_circ_ag.5 AT4G33260_circ_g.6 4_circ_ag.7 4_circ_ag.8 AT4G33260_circ_g.9 4_circ_ag.10 4_circ_ag.11 AT4G33270_circ_g.2 AT4G33270_circ_g.3 						
					
						Support reads
						58
					
						Tissues
						root, aerial, inflorescences, whole_plant, leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G33270.1:3

General Information
CircRNA Name	AT4G33270_circ_g.1
ID in PlantcircBase	ath_circ_034384
Alias	Ath_circ_FC2958, AT4G33270_C1
Organism	Arabidpsis thaliana
Position	chr4: 16044793-16046106 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder, circRNA_finder, find_circ, CIRI2
Parent gene	AT4G33270
Parent gene annotation	Cell division cycle 20.1, cofactor of APC complex
Parent gene strand	-
Alternative splicing	AT4G33250_circ_g.1 AT4G33250_circ_g.2 AT4G33250_circ_g.3 AT4G33250_circ_g.4 4_circ_ag.5 AT4G33260_circ_g.1 AT4G33260_circ_g.2 AT4G33260_circ_g.3 4_circ_ag.4 4_circ_ag.5 AT4G33260_circ_g.6 4_circ_ag.7 4_circ_ag.8 AT4G33260_circ_g.9 4_circ_ag.10 4_circ_ag.11 AT4G33270_circ_g.2 AT4G33270_circ_g.3
Support reads	58
Tissues	root, aerial, inflorescences, whole_plant, leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G33270.1:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTACCGCTGCAGTCTGATCCTTACCTTTTCTTCCTTCAGTGAGGGCAAAGTGAGCATAGTCAAA
ATTCATCGCTGATCTGTTCGGTATGAACCTGTCCAGctgggccatatatagaactcttgatgta
tgaccagtgagctcagccattttcaccatggatggatacttccaaagtgtgagctgattctgtg
taaacccg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1131
Transcript exons: 16044793-16045374,16045456-16045725,16045828-16046106
CTGGGCCATATATAGAACTCTTGATGTATGACCAGTGAGCTCAGCCATTTTCACCATGGATGGA
TACTTCCAAAGTGTGAGCTGATTCTGTGTAAACCCGTGTGAGCTAAGCAACTCTCTTTCATTCT
TGCTCCATAACAACGAACAAACTTGGGAACCAGTGTCTACTGAATTCAAGCAAGCCCCAGTGTG
AGTATTCCAGAACTTGATCGTCCTGTCTCCTCCACCACCACCAGTTGCAAGCAAATTCGCTTGG
AAAGGGCACCACGCAAGAGCCTTCACAGCAGATGTATGTTCCTCAAGCCTGTGCAGCCATTGTG
TGGTTGAGTTTGAGGAAGCGACAGAACGATCCCAGATGTGTACCACATTGTCGTTGCCACCACT
TGCTAGTTGTTGTCCAGATCCTGACCACTTGAGCCCACAAACTTCTTGAGTGTGACCTCTGTAA
GTTTCCACAATGGGTGATCTGATCCTCACATCATTGTTGATGATCAGTCCATCCATTCCTCCAG
TAGTAAGGATGTGATTGTTCCATGCCAGTGATCCTACTCGTGACTGGTGACCACCCTTCAATGT
TCTCAGTTGACGGTTGGATGCAGAATCCCACAGCTGGACTTCAGAGTTGTTGAGTCCAACTGCA
ACATGACGACCATCAGGAGCCCAGTTGATACTTGTGACAGGTCCCTTCTCCTCATCAATGGTCA
CAAGCTCAGATGTAGAACCAGTGGAAGCATCCCACAAGTAGACAGTGTGGTCCAACGCTATGGC
TAAGACATTTGCACTTCCCCAGTCCAGCAAGTTGAGGTAGAAATCGTCAACAATGTCAGGTGCA
TCCAAGGTCCTCTCAGAAGTCTGAGGAATGTATCGACGAGGCTTTACAGATTTGGGCTGTTGGT
GAAGAGAAGCAGAGTGATTGCTGGGAAGCAGTTCGACAGGAGCCTGAGGTTTGTTTCTGAAGGC
GAGAATCCTTGTGTGGTTCAAGTTCATGGTCTCAGCCAATTGCTTCCTGTAGGCCTCTTTGGAT
GGTGAACTTACCGCTGCAGTCTGATCCTTACCTTTTCTTCCTTCAGTGAGGGCAAAGTGAGCAT
AGTCAAAATTCATCGCTGATCTGTTCGGTATGAACCTGTCCAG
Transcript length: 644
Transcript exons: 16044793-16044923,16045188-16045374,16045626-16045728,16
045828-16045989,16046046-16046106
CTGGGCCATATATAGAACTCTTGATGTATGACCAGTGAGCTCAGCCATTTTCACCATGGATGGA
TACTTCCAAAGTGTGAGCTGATTCTGTGTAAACCCGTGTGAGCTAAGCAACTCTCTTTCATTCT
TGCGTCCAGATCCTGACCACTTGAGCCCACAAACTTCTTGAGTGTGACCTCTGTAAGTTTCCAC
AATGGGTGATCTGATCCTCACATCATTGTTGATGATCAGTCCATCCATTCCTCCAGTAGTAAGG
ATGTGATTGTTCCATGCCAGTGATCCTACTCGTGACTGGTGACCACCCTTCAATGTTCTCAGGG
TCCAACGCTATGGCTAAGACATTTGCACTTCCCCAGTCCAGCAAGTTGAGGTAGAAATCGTCAA
CAATGTCAGGTGCATCCAAGGTCCTCTCAGAAGTCTGCTGAGGAATGTATCGACGAGGCTTTAC
AGATTTGGGCTGTTGGTGAAGAGAAGCAGAGTGATTGCTGGGAAGCAGTTCGACAGGAGCCTGA
GGTTTGTTTCTGAAGGCGAGAATCCTTGTGTGGTTCAAGTTCATGGTCTCAGCCAATTGCTTCC
TGTAGGCTGAGGGCAAAGTGAGCATAGTCAAAATTCATCGCTGATCTGTTCGGTATGAACCTGT
CCAG
Transcript length: 923
Transcript exons: 16044793-16045007,16045143-16045374,16045532-16045728,16
045828-16046106
CTGGGCCATATATAGAACTCTTGATGTATGACCAGTGAGCTCAGCCATTTTCACCATGGATGGA
TACTTCCAAAGTGTGAGCTGATTCTGTGTAAACCCGTGTGAGCTAAGCAACTCTCTTTCATTCT
TGCTCCATAACAACGAACAAACTTGGGAACCAGTGTCTACTGAATTCAAGCAAGCCCCAGTGTG
AGTATTCCAGAACTTGATCGTCCCCCAGATGTGTACCACATTGTCGTTGCCACCACTTGCTAGT
TGTTGTCCAGATCCTGACCACTTGAGCCCACAAACTTCTTGAGTGTGACCTCTGTAAGTTTCCA
CAATGGGTGATCTGATCCTCACATCATTGTTGATGATCAGTCCATCCATTCCTCCAGTAGTAAG
GATGTGATTGTTCCATGCCAGTGATCCTACTCGTGACTGGTGACCACCCTTCAATGTTCTCAGG
CCCAGTTGATACTTGTGACAGGTCCCTTCTCCTCATCAATGGTCACAAGCTCAGATGTAGAACC
AGTGGAAGCATCCCACAAGTAGACAGTGTGGTCCAACGCTATGGCTAAGACATTTGCACTTCCC
CAGTCCAGCAAGTTGAGGTAGAAATCGTCAACAATGTCAGGTGCATCCAAGGTCCTCTCAGAAG
TCTGCTGAGGAATGTATCGACGAGGCTTTACAGATTTGGGCTGTTGGTGAAGAGAAGCAGAGTG
ATTGCTGGGAAGCAGTTCGACAGGAGCCTGAGGTTTGTTTCTGAAGGCGAGAATCCTTGTGTGG
TTCAAGTTCATGGTCTCAGCCAATTGCTTCCTGTAGGCCTCTTTGGATGGTGAACTTACCGCTG
CAGTCTGATCCTTACCTTTTCTTCCTTCAGTGAGGGCAAAGTGAGCATAGTCAAAATTCATCGC
TGATCTGTTCGGTATGAACCTGTCCAG
						
					

						Genomic sequence
						
							CTGGGCCATATATAGAACTCTTGATGTATGACCAGTGAGCTCAGCCATTTTCACCATGGATGGA
TACTTCCAAAGTGTGAGCTGATTCTGTGTAAACCCGTGTGAGCTAAGCAACTCTCTTTCATTCT
TGCTCCATAACAACGAACAAACTTGGGAACCAGTGTCTACTGAATTCAAGCAAGCCCCAGTGTG
AGTATTCCAGAACTTGATCGTCCTGTCTCCTCCACCACCACCAGTTGCAAGCAAATTCGCTTGG
AAAGGGCACCACGCAAGAGCCTTCACAGCAGATGTATGTTCCTCAAGCCTGTGCAGCCATTGTG
TGGTTGAGTTTGAGGAAGCGACAGAACGATCCCAGATGTGTACCACATTGTCGTTGCCACCACT
TGCTAGTTGTTGTCCAGATCCTGACCACTTGAGCCCACAAACTTCTTGAGTGTGACCTCTGTAA
GTTTCCACAATGGGTGATCTGATCCTCACATCATTGTTGATGATCAGTCCATCCATTCCTCCAG
TAGTAAGGATGTGATTGTTCCATGCCAGTGATCCTACTCGTGACTGGTGACCACCCTTCAATGT
TCTCAGCTGCAAGTATATGATAAAACACATGAGACTAAGAACACCGGATATTATATCTCAACAT
AAAAGAGAGAGAGTAGTAATTACTTGACGGTTGGATGCAGAATCCCACAGCTGGACTTCAGAGT
TGTTGAGTCCAACTGCAACATGACGACCATCAGGAGCCCAGTTGATACTTGTGACAGGTCCCTT
CTCCTCATCAATGGTCACAAGCTCAGATGTAGAACCAGTGGAAGCATCCCACAAGTAGACAGTG
TGGTCCAACGCTATGGCTAAGACATTTGCACTTCCCCAGTCCAGCAAGTTGAGGTAGAAATCGT
CAACAATGTCAGGTGCATCCAAGGTCCTCTCAGAAGTCTGTTAATCACAACAGAAAGTTTAGCA
ACAGATCAATACAACTCAAAAGCAGCAACCAGTAAGTGAGCTTTAAGGATCAAACGCATTAAAT
ACAGTACATACCTGAGGAATGTATCGACGAGGCTTTACAGATTTGGGCTGTTGGTGAAGAGAAG
CAGAGTGATTGCTGGGAAGCAGTTCGACAGGAGCCTGAGGTTTGTTTCTGAAGGCGAGAATCCT
TGTGTGGTTCAAGTTCATGGTCTCAGCCAATTGCTTCCTGTAGGCCTCTTTGGATGGTGAACTT
ACCGCTGCAGTCTGATCCTTACCTTTTCTTCCTTCAGTGAGGGCAAAGTGAGCATAGTCAAAAT
TCATCGCTGATCTGTTCGGTATGAACCTGTCCAG
						
					

			
		

Sequences
Splice junction sequence	TTACCGCTGCAGTCTGATCCTTACCTTTTCTTCCTTCAGTGAGGGCAAAGTGAGCATAGTCAAA ATTCATCGCTGATCTGTTCGGTATGAACCTGTCCAGctgggccatatatagaactcttgatgta tgaccagtgagctcagccattttcaccatggatggatacttccaaagtgtgagctgattctgtg taaacccg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1131 Transcript exons: 16044793-16045374,16045456-16045725,16045828-16046106 CTGGGCCATATATAGAACTCTTGATGTATGACCAGTGAGCTCAGCCATTTTCACCATGGATGGA TACTTCCAAAGTGTGAGCTGATTCTGTGTAAACCCGTGTGAGCTAAGCAACTCTCTTTCATTCT TGCTCCATAACAACGAACAAACTTGGGAACCAGTGTCTACTGAATTCAAGCAAGCCCCAGTGTG AGTATTCCAGAACTTGATCGTCCTGTCTCCTCCACCACCACCAGTTGCAAGCAAATTCGCTTGG AAAGGGCACCACGCAAGAGCCTTCACAGCAGATGTATGTTCCTCAAGCCTGTGCAGCCATTGTG TGGTTGAGTTTGAGGAAGCGACAGAACGATCCCAGATGTGTACCACATTGTCGTTGCCACCACT TGCTAGTTGTTGTCCAGATCCTGACCACTTGAGCCCACAAACTTCTTGAGTGTGACCTCTGTAA GTTTCCACAATGGGTGATCTGATCCTCACATCATTGTTGATGATCAGTCCATCCATTCCTCCAG TAGTAAGGATGTGATTGTTCCATGCCAGTGATCCTACTCGTGACTGGTGACCACCCTTCAATGT TCTCAGTTGACGGTTGGATGCAGAATCCCACAGCTGGACTTCAGAGTTGTTGAGTCCAACTGCA ACATGACGACCATCAGGAGCCCAGTTGATACTTGTGACAGGTCCCTTCTCCTCATCAATGGTCA CAAGCTCAGATGTAGAACCAGTGGAAGCATCCCACAAGTAGACAGTGTGGTCCAACGCTATGGC TAAGACATTTGCACTTCCCCAGTCCAGCAAGTTGAGGTAGAAATCGTCAACAATGTCAGGTGCA TCCAAGGTCCTCTCAGAAGTCTGAGGAATGTATCGACGAGGCTTTACAGATTTGGGCTGTTGGT GAAGAGAAGCAGAGTGATTGCTGGGAAGCAGTTCGACAGGAGCCTGAGGTTTGTTTCTGAAGGC GAGAATCCTTGTGTGGTTCAAGTTCATGGTCTCAGCCAATTGCTTCCTGTAGGCCTCTTTGGAT GGTGAACTTACCGCTGCAGTCTGATCCTTACCTTTTCTTCCTTCAGTGAGGGCAAAGTGAGCAT AGTCAAAATTCATCGCTGATCTGTTCGGTATGAACCTGTCCAG Transcript length: 644 Transcript exons: 16044793-16044923,16045188-16045374,16045626-16045728,16 045828-16045989,16046046-16046106 CTGGGCCATATATAGAACTCTTGATGTATGACCAGTGAGCTCAGCCATTTTCACCATGGATGGA TACTTCCAAAGTGTGAGCTGATTCTGTGTAAACCCGTGTGAGCTAAGCAACTCTCTTTCATTCT TGCGTCCAGATCCTGACCACTTGAGCCCACAAACTTCTTGAGTGTGACCTCTGTAAGTTTCCAC AATGGGTGATCTGATCCTCACATCATTGTTGATGATCAGTCCATCCATTCCTCCAGTAGTAAGG ATGTGATTGTTCCATGCCAGTGATCCTACTCGTGACTGGTGACCACCCTTCAATGTTCTCAGGG TCCAACGCTATGGCTAAGACATTTGCACTTCCCCAGTCCAGCAAGTTGAGGTAGAAATCGTCAA CAATGTCAGGTGCATCCAAGGTCCTCTCAGAAGTCTGCTGAGGAATGTATCGACGAGGCTTTAC AGATTTGGGCTGTTGGTGAAGAGAAGCAGAGTGATTGCTGGGAAGCAGTTCGACAGGAGCCTGA GGTTTGTTTCTGAAGGCGAGAATCCTTGTGTGGTTCAAGTTCATGGTCTCAGCCAATTGCTTCC TGTAGGCTGAGGGCAAAGTGAGCATAGTCAAAATTCATCGCTGATCTGTTCGGTATGAACCTGT CCAG Transcript length: 923 Transcript exons: 16044793-16045007,16045143-16045374,16045532-16045728,16 045828-16046106 CTGGGCCATATATAGAACTCTTGATGTATGACCAGTGAGCTCAGCCATTTTCACCATGGATGGA TACTTCCAAAGTGTGAGCTGATTCTGTGTAAACCCGTGTGAGCTAAGCAACTCTCTTTCATTCT TGCTCCATAACAACGAACAAACTTGGGAACCAGTGTCTACTGAATTCAAGCAAGCCCCAGTGTG AGTATTCCAGAACTTGATCGTCCCCCAGATGTGTACCACATTGTCGTTGCCACCACTTGCTAGT TGTTGTCCAGATCCTGACCACTTGAGCCCACAAACTTCTTGAGTGTGACCTCTGTAAGTTTCCA CAATGGGTGATCTGATCCTCACATCATTGTTGATGATCAGTCCATCCATTCCTCCAGTAGTAAG GATGTGATTGTTCCATGCCAGTGATCCTACTCGTGACTGGTGACCACCCTTCAATGTTCTCAGG CCCAGTTGATACTTGTGACAGGTCCCTTCTCCTCATCAATGGTCACAAGCTCAGATGTAGAACC AGTGGAAGCATCCCACAAGTAGACAGTGTGGTCCAACGCTATGGCTAAGACATTTGCACTTCCC CAGTCCAGCAAGTTGAGGTAGAAATCGTCAACAATGTCAGGTGCATCCAAGGTCCTCTCAGAAG TCTGCTGAGGAATGTATCGACGAGGCTTTACAGATTTGGGCTGTTGGTGAAGAGAAGCAGAGTG ATTGCTGGGAAGCAGTTCGACAGGAGCCTGAGGTTTGTTTCTGAAGGCGAGAATCCTTGTGTGG TTCAAGTTCATGGTCTCAGCCAATTGCTTCCTGTAGGCCTCTTTGGATGGTGAACTTACCGCTG CAGTCTGATCCTTACCTTTTCTTCCTTCAGTGAGGGCAAAGTGAGCATAGTCAAAATTCATCGC TGATCTGTTCGGTATGAACCTGTCCAG
Genomic sequence	CTGGGCCATATATAGAACTCTTGATGTATGACCAGTGAGCTCAGCCATTTTCACCATGGATGGA TACTTCCAAAGTGTGAGCTGATTCTGTGTAAACCCGTGTGAGCTAAGCAACTCTCTTTCATTCT TGCTCCATAACAACGAACAAACTTGGGAACCAGTGTCTACTGAATTCAAGCAAGCCCCAGTGTG AGTATTCCAGAACTTGATCGTCCTGTCTCCTCCACCACCACCAGTTGCAAGCAAATTCGCTTGG AAAGGGCACCACGCAAGAGCCTTCACAGCAGATGTATGTTCCTCAAGCCTGTGCAGCCATTGTG TGGTTGAGTTTGAGGAAGCGACAGAACGATCCCAGATGTGTACCACATTGTCGTTGCCACCACT TGCTAGTTGTTGTCCAGATCCTGACCACTTGAGCCCACAAACTTCTTGAGTGTGACCTCTGTAA GTTTCCACAATGGGTGATCTGATCCTCACATCATTGTTGATGATCAGTCCATCCATTCCTCCAG TAGTAAGGATGTGATTGTTCCATGCCAGTGATCCTACTCGTGACTGGTGACCACCCTTCAATGT TCTCAGCTGCAAGTATATGATAAAACACATGAGACTAAGAACACCGGATATTATATCTCAACAT AAAAGAGAGAGAGTAGTAATTACTTGACGGTTGGATGCAGAATCCCACAGCTGGACTTCAGAGT TGTTGAGTCCAACTGCAACATGACGACCATCAGGAGCCCAGTTGATACTTGTGACAGGTCCCTT CTCCTCATCAATGGTCACAAGCTCAGATGTAGAACCAGTGGAAGCATCCCACAAGTAGACAGTG TGGTCCAACGCTATGGCTAAGACATTTGCACTTCCCCAGTCCAGCAAGTTGAGGTAGAAATCGT CAACAATGTCAGGTGCATCCAAGGTCCTCTCAGAAGTCTGTTAATCACAACAGAAAGTTTAGCA ACAGATCAATACAACTCAAAAGCAGCAACCAGTAAGTGAGCTTTAAGGATCAAACGCATTAAAT ACAGTACATACCTGAGGAATGTATCGACGAGGCTTTACAGATTTGGGCTGTTGGTGAAGAGAAG CAGAGTGATTGCTGGGAAGCAGTTCGACAGGAGCCTGAGGTTTGTTTCTGAAGGCGAGAATCCT TGTGTGGTTCAAGTTCATGGTCTCAGCCAATTGCTTCCTGTAGGCCTCTTTGGATGGTGAACTT ACCGCTGCAGTCTGATCCTTACCTTTTCTTCCTTCAGTGAGGGCAAAGTGAGCATAGTCAAAAT TCATCGCTGATCTGTTCGGTATGAACCTGTCCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.794574388

Conservation Information
Conserved circRNAs	NA
PMCS	0.794574388

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							16046077-16044795(-)
						
					

						Potential amino acid sequence
						
							MNFDYAHFALTEGRKGKDQTAAVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNH
SASLHQQPKSVKPRRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGS
TSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNN
HILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVAS
SNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCS
LLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQLDRFIPNRSAMNFDYAH
FALTEGRKGKDQTAAVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQ
PKSVKPRRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTI
DEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGG
MDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQW
LHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNE
RELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQLDRFIPNRSAMNFDYAHFALTEGR
KGKDQTAAVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPR
RYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPV
TSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIIN
NDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEH
TSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSH
GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQLDRFIPNRSAMNFDYAHFALTEGRKGKDQTA
AVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPRRYIPQTS
ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAP
DGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRS
PIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKAL
AWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQL
TLWKYPSMVKMAELTGHTSRVLYMAQ(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						response to drought stress
					

			
		

Functional Information
Coding potential	Y
Potential coding position	16046077-16044795(-)
Potential amino acid sequence	MNFDYAHFALTEGRKGKDQTAAVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNH SASLHQQPKSVKPRRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGS TSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNN HILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVAS SNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCS LLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQLDRFIPNRSAMNFDYAH FALTEGRKGKDQTAAVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQ PKSVKPRRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTI DEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGG MDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQW LHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNE RELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQLDRFIPNRSAMNFDYAHFALTEGR KGKDQTAAVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPR RYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPV TSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIIN NDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEH TSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSH GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQLDRFIPNRSAMNFDYAHFALTEGRKGKDQTA AVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPRRYIPQTS ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAP DGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRS PIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKAL AWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQL TLWKYPSMVKMAELTGHTSRVLYMAQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	response to drought stress

			
						 Other Information
					
						References
						Chu et al., 2017;Chen et al., 2017a;Zhang et al., 2019

circRNA

Detail information of AT4G33270_circ_g.1

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