Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G17280_circ_g.2 |
ID in PlantcircBase | ath_circ_003048 |
Alias | At_ciR3020 |
Organism | Arabidpsis thaliana |
Position | chr1: 5917964-5919197 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | AT1G17280 |
Parent gene annotation |
ubiquitin-conjugating enzyme 34 |
Parent gene strand | - |
Alternative splicing | AT1G17280_circ_g.1 AT1G17280_circ_g.3 AT1G17280_circ_g.4 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G17280.8:6 AT1G17280.7:6 AT1G17280.3:6 AT1G17280.1:6 AT1G17280.6:6 AT1G17280.5:6 AT1G17280.4:6 AT1G17280.9:6 AT1G17280.2:6 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.142619422 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |