Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G17280_circ_g.3 |
ID in PlantcircBase | ath_circ_003049 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5918088-5919197 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G17280 |
Parent gene annotation |
ubiquitin-conjugating enzyme 34 |
Parent gene strand | - |
Alternative splicing | AT1G17280_circ_g.1 AT1G17280_circ_g.2 AT1G17280_circ_g.4 |
Support reads | 1 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G17280.5:5 AT1G17280.6:5 AT1G17280.3:5 AT1G17280.9:5 AT1G17280.2:5 AT1G17280.1:5 AT1G17280.7:5 AT1G17280.8:5 AT1G17280.4:5 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.136405135 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |