Plant Circular RNA Database

Detail information of AT2G21380_circ_g.11

			
						 General Information
					
						CircRNA Name
						AT2G21380_circ_g.11
					
						ID in PlantcircBase
						ath_circ_014204
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr2: 9144723-9148095  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						PcircRNA_finder
					
						Parent gene
						
							AT2G21380						
					
						Parent gene annotation
						
							Kinesin-like protein KIN-7M, chloroplastic
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT2G21380_circ_g.1 AT2G21380_circ_g.2 AT2G21380_circ_g.3 AT2G21380_circ_g.4 AT2G21380_circ_g.5 AT2G21380_circ_g.6 AT2G21380_circ_g.7 AT2G21380_circ_g.8 AT2G21380_circ_g.9 AT2G21380_circ_g.10 AT2G21380_circ_g.12 AT2G21380_circ_g.13 AT2G21380_circ_g.14 AT2G21380_circ_g.15 AT2G21380_circ_g.16 AT2G21380_circ_g.17 AT2G21380_circ_g.18 						
					
						Support reads
						2
					
						Tissues
						aerial
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT2G21380.1:11
AT2G21380.2:11

General Information
CircRNA Name	AT2G21380_circ_g.11
ID in PlantcircBase	ath_circ_014204
Alias	NA
Organism	Arabidpsis thaliana
Position	chr2: 9144723-9148095 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	PcircRNA_finder
Parent gene	AT2G21380
Parent gene annotation	Kinesin-like protein KIN-7M, chloroplastic
Parent gene strand	+
Alternative splicing	AT2G21380_circ_g.1 AT2G21380_circ_g.2 AT2G21380_circ_g.3 AT2G21380_circ_g.4 AT2G21380_circ_g.5 AT2G21380_circ_g.6 AT2G21380_circ_g.7 AT2G21380_circ_g.8 AT2G21380_circ_g.9 AT2G21380_circ_g.10 AT2G21380_circ_g.12 AT2G21380_circ_g.13 AT2G21380_circ_g.14 AT2G21380_circ_g.15 AT2G21380_circ_g.16 AT2G21380_circ_g.17 AT2G21380_circ_g.18
Support reads	2
Tissues	aerial
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT2G21380.1:11 AT2G21380.2:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATCTTGAAAGAGAGGCAACTCGTGAATGGACATGAAGAAGTAATAGTTGCCAAGGCTGAAGAG
ACACCAAAGGAGGAACCTCTTGTTGCTCGTCTTAAGgtgattggaaaactgactgagggcaaga
caactcatgtcccatttcgggactctaagctaactcgtcttctgcaatcttcactgagtgggca
tgggcatg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTGATTGGAAAACTGACTGAGGGCAAGACAACTCATGTCCCATTTCGGGACTCTAAGCTAACTC
GTCTTCTGCAATCTTCACTGAGTGGGCATGGGCATGTATCGGTACGACTCTTCTGTATCTGGTG
AATATTTCCCATTTTACTGTAATAGTTTTCACACGGTTGATTATCTCAGATTGTCTAATTGTGT
TGTCTTCAGTAGCATATTTAAGGCAATGTTGGTTTGTTTGTATTTATTGGCTATCTAATATACG
CTGTGTGCTGATCTTAATTTTAAAATCGCAATGAGCAGAAGCTAATTAAAATTTTATTTTCTGA
AACTTTTGTAGCTCATATGTACAGTTACTCCTGCGTCAAGCAGTACCGAGGAAACTCATAATAC
TTTGAAGTTTGCCAGCAGGGCAAAGAGAATTGAAATTAATGCCTCACGCAATAAGGTCATTTCT
TAGGCTTTTGGTCATGAAGTACTTGGCTTTTTCATACAAAAAAGAAGAAGAAGTATTTGACTTC
TATTGATGGCATAACCTAAAATTCGGCTAAAAAATACATTGTTTCATATCTTGCAACAGATCAT
AGATGAGAAGTCATTGATTAAGAAATATCAGAAAGAAATCTCGACCCTCAAAGTCGAACTTGAT
CAGCTAAGAAGGGGTGTGCTAGTTGGTGTCAGTCACGAAGAGTTATTGAGCCTAAAGCAACAGG
TTCTAACCTCCCCGAGACCTTGTTATTTCATAAATGTTTGAGTTTATTCCTATTTGGTGAATAG
ATCGAGCTATCAATTTATTAACAGCTACAAGAAGGTCAAGTGAAGATGCAATCAAGATTGGAGG
AAGAAGAAGAAGCTAAAGCAGCTCTAATGAGTAGAATCCAAAAGCTTACAAAGCTCATACTTGT
CTCTACCAAGAATTCTATTCCTGGATATTTAGGTGACACACCAGCTCATTCTCGCAGCATTTCT
GCTGGTAAAGATGATGTAAGTTTGTTATTTAGATCTGATTATCACTGTGTTCCTATATTCCTTT
TTAACTGTTGCATGTTGGTTCCTCACTGCCCAAGAGGTTTGATACCTGATTGACTCATTCTGTT
TTCTTTCTGCTCTTCAGAAGTTAGACTCTCTGCTCTTGGATAGTGATAATCTGGCATCTCCATC
TTCGACTCTCTCTCTAGCATCAGATGCGCGACGGTCTTCCAGCAAGTTTAAGGATGAAAACTCT
CCAGTTGGTTCTCGTGCAGAATTAACTCAAGTAAGTTCTGGGATTCTTAGCGTATATAGTTTTA
CATTGAATTTCGTTTATTAGAAGTTTGGTGTATTCTTGTTTTCAATCCAAATGGTTACAGAAAA
GGGTGTTTAATGATTCAGTGTCGCATGCACCCATTTAACCTTTCTTTTATCCCATGAATATGAT
TTTTTCAGTGTTTTTATCAGAAAATGACATTTGATAGTTGTGGCTATTACAGGGCGTTATGACT
CCCGATGAAATGGATCTCCTCGTTGAGCAAGTTAAGATGCTTGCTGGTGAGATAGCTTTCGGCA
CAAGCACACTAAAGCGTTTGGTGGATCAGTCCATGAATGATCCTGAAAACTCGAAAACCCAAGT
AAAGATTCTTCTTTATCTATCTAGAGAATTATATACCAGTATGACTGTGGTCTCCCTAATTTCA
AGTTTTAACCCTGAAAATCAGAAAATGCATCTCCAGATGCTGAACTTTATTAGCATTCCACTTT
AAGCCATTTATTTACCTATAAGCATAACTACGGAACTTATTATATGCTGGCATGCAGATCCAGA
ATCTAGAAAATGATATTCAAGAAAAGCAAAGACAAATGAAATCCTTGGAACAGAGAATAACTGA
GAGTGGTGAAGCTTCAATTGCTAATGCATCATCGATTGAGATGCAAGAGGTAACCTAATCTATA
CATCTTATATTTATGATCCTTTACCCTCTTAAGGTCATTCAGTTGTGGACACAGTGTGGATCAG
CTAAAGGTATTACAATTATTTTTGTTGTTTTCAGAAAGTTATGAGATTGATGACACAATGCAAT
GAGAAGAGCTTTGAGCTGGAGGTAAAATGTCTCTCTAGAATGAAATGTCTTCTTCTATAGCGAA
TATGGAAGATTTCTCAAGTCAATATATATATTTAAATGTGTTCTACCTATGGATCAGATTATAT
CAGCAGATAATCGTATTCTCCAAGAACAACTACAGACAAAGGTCACTTCTAAGTCACGGACTCC
TTTTATTCTTTTATTCTTTTTTATTTTTCATATACAGCATTTTCTTGTGGCTATTATCTCAGTC
ATCCTTACTTATATACACATGCTCTAACAACTGCAGTGTACCGAGAACAATGAATTGCACGAAA
AGGTGCATCTTCTAGAGCAACGATTATCGAGTCAGAAGGCCACACTGTCTTGTTGTGATGTTGT
GACTGAAGAGTATGTAGATGAGCTGAAAAAGAAAGTACAGTCTCAGGTAATTTCTCAAAATCTC
AACCAATTTTGTCAAATTTGCGACCATGCATTCTCACAAGTATGCCTGAATCCTGATAAATATC
TTCACTGGTTGCGAGGAGATTGTGAAAACACATATAATGATATATATGTTTAATGGACCTCTCA
TTGTATTTACATGAGCGTTTGATGTTTTCATACTTCAGGAGATTGAGAACGAAAAGTTGAAGCT
AGAGCATGTGCAGAGTGTGGAGGAGAAGAGTGGATTACGAGTGCAAAATCAAAAATTAGCTGAA
GAAGCTTCATATGCAAAAGAATTGGCCTCTGCAGCTGCTATTGAGCTGAAGAATCTAGCTGATG
AAGTTACAAAGCTCTCGCTTCAAAACGCAAAGCTAGAAAAAGAATTAGTAGCTGCAAGAGACTT
GGCAGCGGCAGCTCAGAAGCGTAACAACAACTCCATGAACAGCGCAGCGAACCGTAATGGAACA
AGGCCAGGGAGAAAGGCAAGGATCTCAGACTCATGGAACCTCAACCAAGAAAATCTCACAATGG
AATTGCAGGCAAGGAAACAGCGAGAAGCAGTACTTGAGGCTGCACTAGCTGAGAAAGAATACAT
AGAAGAAGAGTTTAGGAAAAAAGCTGAAGAAGCAAAGAGAAGAGAAGAGGCCCTTGAAAACGAT
TTAGCCAACATGTGGGTGCTTGTTGCCAAGTTGAAGAAAGCCAATAGTGGCGCCTTGTCAATAC
AAAAGAGTGACGAAGCAGAGCCTGCAAAGGAAGATGAAGTGACAGAGTTAGATAATAAGAATGA
ACAAAATGCAATCTTGAAAGAGAGGCAACTCGTGAATGGACATGAAGAAGTAATAGTTGCCAAG
GCTGAAGAGACACCAAAGGAGGAACCTCTTGTTGCTCGTCTTAAG
						
					

			
		

Sequences
Splice junction sequence	AATCTTGAAAGAGAGGCAACTCGTGAATGGACATGAAGAAGTAATAGTTGCCAAGGCTGAAGAG ACACCAAAGGAGGAACCTCTTGTTGCTCGTCTTAAGgtgattggaaaactgactgagggcaaga caactcatgtcccatttcgggactctaagctaactcgtcttctgcaatcttcactgagtgggca tgggcatg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTGATTGGAAAACTGACTGAGGGCAAGACAACTCATGTCCCATTTCGGGACTCTAAGCTAACTC GTCTTCTGCAATCTTCACTGAGTGGGCATGGGCATGTATCGGTACGACTCTTCTGTATCTGGTG AATATTTCCCATTTTACTGTAATAGTTTTCACACGGTTGATTATCTCAGATTGTCTAATTGTGT TGTCTTCAGTAGCATATTTAAGGCAATGTTGGTTTGTTTGTATTTATTGGCTATCTAATATACG CTGTGTGCTGATCTTAATTTTAAAATCGCAATGAGCAGAAGCTAATTAAAATTTTATTTTCTGA AACTTTTGTAGCTCATATGTACAGTTACTCCTGCGTCAAGCAGTACCGAGGAAACTCATAATAC TTTGAAGTTTGCCAGCAGGGCAAAGAGAATTGAAATTAATGCCTCACGCAATAAGGTCATTTCT TAGGCTTTTGGTCATGAAGTACTTGGCTTTTTCATACAAAAAAGAAGAAGAAGTATTTGACTTC TATTGATGGCATAACCTAAAATTCGGCTAAAAAATACATTGTTTCATATCTTGCAACAGATCAT AGATGAGAAGTCATTGATTAAGAAATATCAGAAAGAAATCTCGACCCTCAAAGTCGAACTTGAT CAGCTAAGAAGGGGTGTGCTAGTTGGTGTCAGTCACGAAGAGTTATTGAGCCTAAAGCAACAGG TTCTAACCTCCCCGAGACCTTGTTATTTCATAAATGTTTGAGTTTATTCCTATTTGGTGAATAG ATCGAGCTATCAATTTATTAACAGCTACAAGAAGGTCAAGTGAAGATGCAATCAAGATTGGAGG AAGAAGAAGAAGCTAAAGCAGCTCTAATGAGTAGAATCCAAAAGCTTACAAAGCTCATACTTGT CTCTACCAAGAATTCTATTCCTGGATATTTAGGTGACACACCAGCTCATTCTCGCAGCATTTCT GCTGGTAAAGATGATGTAAGTTTGTTATTTAGATCTGATTATCACTGTGTTCCTATATTCCTTT TTAACTGTTGCATGTTGGTTCCTCACTGCCCAAGAGGTTTGATACCTGATTGACTCATTCTGTT TTCTTTCTGCTCTTCAGAAGTTAGACTCTCTGCTCTTGGATAGTGATAATCTGGCATCTCCATC TTCGACTCTCTCTCTAGCATCAGATGCGCGACGGTCTTCCAGCAAGTTTAAGGATGAAAACTCT CCAGTTGGTTCTCGTGCAGAATTAACTCAAGTAAGTTCTGGGATTCTTAGCGTATATAGTTTTA CATTGAATTTCGTTTATTAGAAGTTTGGTGTATTCTTGTTTTCAATCCAAATGGTTACAGAAAA GGGTGTTTAATGATTCAGTGTCGCATGCACCCATTTAACCTTTCTTTTATCCCATGAATATGAT TTTTTCAGTGTTTTTATCAGAAAATGACATTTGATAGTTGTGGCTATTACAGGGCGTTATGACT CCCGATGAAATGGATCTCCTCGTTGAGCAAGTTAAGATGCTTGCTGGTGAGATAGCTTTCGGCA CAAGCACACTAAAGCGTTTGGTGGATCAGTCCATGAATGATCCTGAAAACTCGAAAACCCAAGT AAAGATTCTTCTTTATCTATCTAGAGAATTATATACCAGTATGACTGTGGTCTCCCTAATTTCA AGTTTTAACCCTGAAAATCAGAAAATGCATCTCCAGATGCTGAACTTTATTAGCATTCCACTTT AAGCCATTTATTTACCTATAAGCATAACTACGGAACTTATTATATGCTGGCATGCAGATCCAGA ATCTAGAAAATGATATTCAAGAAAAGCAAAGACAAATGAAATCCTTGGAACAGAGAATAACTGA GAGTGGTGAAGCTTCAATTGCTAATGCATCATCGATTGAGATGCAAGAGGTAACCTAATCTATA CATCTTATATTTATGATCCTTTACCCTCTTAAGGTCATTCAGTTGTGGACACAGTGTGGATCAG CTAAAGGTATTACAATTATTTTTGTTGTTTTCAGAAAGTTATGAGATTGATGACACAATGCAAT GAGAAGAGCTTTGAGCTGGAGGTAAAATGTCTCTCTAGAATGAAATGTCTTCTTCTATAGCGAA TATGGAAGATTTCTCAAGTCAATATATATATTTAAATGTGTTCTACCTATGGATCAGATTATAT CAGCAGATAATCGTATTCTCCAAGAACAACTACAGACAAAGGTCACTTCTAAGTCACGGACTCC TTTTATTCTTTTATTCTTTTTTATTTTTCATATACAGCATTTTCTTGTGGCTATTATCTCAGTC ATCCTTACTTATATACACATGCTCTAACAACTGCAGTGTACCGAGAACAATGAATTGCACGAAA AGGTGCATCTTCTAGAGCAACGATTATCGAGTCAGAAGGCCACACTGTCTTGTTGTGATGTTGT GACTGAAGAGTATGTAGATGAGCTGAAAAAGAAAGTACAGTCTCAGGTAATTTCTCAAAATCTC AACCAATTTTGTCAAATTTGCGACCATGCATTCTCACAAGTATGCCTGAATCCTGATAAATATC TTCACTGGTTGCGAGGAGATTGTGAAAACACATATAATGATATATATGTTTAATGGACCTCTCA TTGTATTTACATGAGCGTTTGATGTTTTCATACTTCAGGAGATTGAGAACGAAAAGTTGAAGCT AGAGCATGTGCAGAGTGTGGAGGAGAAGAGTGGATTACGAGTGCAAAATCAAAAATTAGCTGAA GAAGCTTCATATGCAAAAGAATTGGCCTCTGCAGCTGCTATTGAGCTGAAGAATCTAGCTGATG AAGTTACAAAGCTCTCGCTTCAAAACGCAAAGCTAGAAAAAGAATTAGTAGCTGCAAGAGACTT GGCAGCGGCAGCTCAGAAGCGTAACAACAACTCCATGAACAGCGCAGCGAACCGTAATGGAACA AGGCCAGGGAGAAAGGCAAGGATCTCAGACTCATGGAACCTCAACCAAGAAAATCTCACAATGG AATTGCAGGCAAGGAAACAGCGAGAAGCAGTACTTGAGGCTGCACTAGCTGAGAAAGAATACAT AGAAGAAGAGTTTAGGAAAAAAGCTGAAGAAGCAAAGAGAAGAGAAGAGGCCCTTGAAAACGAT TTAGCCAACATGTGGGTGCTTGTTGCCAAGTTGAAGAAAGCCAATAGTGGCGCCTTGTCAATAC AAAAGAGTGACGAAGCAGAGCCTGCAAAGGAAGATGAAGTGACAGAGTTAGATAATAAGAATGA ACAAAATGCAATCTTGAAAGAGAGGCAACTCGTGAATGGACATGAAGAAGTAATAGTTGCCAAG GCTGAAGAGACACCAAAGGAGGAACCTCTTGTTGCTCGTCTTAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.129349254

Conservation Information
Conserved circRNAs	NA
PMCS	0.129349254

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							9145536-9148092(+)
						
					

						Potential amino acid sequence
						
							MQSRLEEEEEAKAALMSRIQKLTKLILVSTKNSIPGYLGDTPAHSRSISAGKDDKLDSLLLDSD
NLASPSSTLSLASDARRSSSKFKDENSPVGSRAELTQGVMTPDEMDLLVEQVKMLAGEIAFGTS
TLKRLVDQSMNDPENSKTQIQNLENDIQEKQRQMKSLEQRITESGEASIANASSIEMQEKVMRL
MTQCNEKSFELEIISADNRILQEQLQTKCTENNELHEKVHLLEQRLSSQKATLSCCDVVTEEYV
DELKKKVQSQEIENEKLKLEHVQSVEEKSGLRVQNQKLAEEASYAKELASAAAIELKNLADEVT
KLSLQNAKLEKELVAARDLAAAAQKRNNNSMNSAANRNGTRPGRKARISDSWNLNQENLTMELQ
ARKQREAVLEAALAEKEYIEEEFRKKAEEAKRREEALENDLANMWVLVAKLKKANSGALSIQKS
DEAEPAKEDEVTELDNKNEQNAILKERQLVNGHEEVIVAKAEETPKEEPLVARLKVIGKLTEGK
TTHVPFRDSKLTRLLQSSLSGHGHVSLICTVTPASSSTEETHNTLKFASRAKRIEINASRNKII
DEKSLIKKYQKEISTLKVELDQLRRGVLVGVSHEELLSLKQQLQEGQVKMQSRLEEEEEAKAAL
MSRIQKLTKLILVSTKNSIPGYLGDTPAHSRSISAGKDDKLDSLLLDSDNLASPSSTLSLASDA
RRSSSKFKDENSPVGSRAELTQGVMTPDEMDLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPEN
SKTQIQNLENDIQEKQRQMKSLEQRITESGEASIANASSIEMQEKVMRLMTQCNEKSFELEIIS
ADNRILQEQLQTKCTENNELHEKVHLLEQRLSSQKATLSCCDVVTEEYVDELKKKVQSQEIENE
KLKLEHVQSVEEKSGLRVQNQKLAEEASYAKELASAAAIELKNLADEVTKLSLQNAKLEKELVA
ARDLAAAAQKRNNNSMNSAANRNGTRPGRKARISDSWNLNQENLTMELQARKQREAVLEAALAE
KEYIEEEFRKKAEEAKRREEALENDLANMWVLVAKLKKANSGALSIQKSDEAEPAKEDEVTELD
NKNEQNAILKERQLVNGHEEVIVAKAEETPKEEPLVARLKVIGKLTEGKTTHVPFRDSKLTRLL
QSSLSGHGHVSLICTVTPASSSTEETHNTLKFASRAKRIEINASRNKIIDEKSLIKKYQKEIST
LKVELDQLRRGVLVGVSHEELLSLKQQLQEGQVKMQSRLEEEEEAKAALMSRIQKLTKLILVST
KNSIPGYLGDTPAHSRSISAGKDDKLDSLLLDSDNLASPSSTLSLASDARRSSSKFKDENSPVG
SRAELTQGVMTPDEMDLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPENSKTQIQNLENDIQEK
QRQMKSLEQRITESGEASIANASSIEMQEKVMRLMTQCNEKSFELEIISADNRILQEQLQTKCT
ENNELHEKVHLLEQRLSSQKATLSCCDVVTEEYVDELKKKVQSQEIENEKLKLEHVQSVEEKSG
LRVQNQKLAEEASYAKELASAAAIELKNLADEVTKLSLQNAKLEKELVAARDLAAAAQKRNNNS
MNSAANRNGTRPGRKARISDSWNLNQENLTMELQARKQREAVLEAALAEKEYIEEEFRKKAEEA
KRREEALENDLANMWVLVAKLKKANSGALSIQKSDEAEPAKEDEVTELDNKNEQNAILKERQLV
NGHEEVIVAKAEETPKEEPLVARLKVIGKLTEGKTTHVPFRDSKLTRLLQSSLSGHGHVSLICT
VTPASSSTEETHNTLKFASRAKRIEINASRNKIIDEKSLIKKYQKEISTLKVELDQLRRGVLVG
VSHEELLSLKQQLQEGQVKMQSRLEEEEEAKAALMSRIQKLTKLILVSTKNSIPGYLGDTPAHS
RSISAGKDDKLDSLLLDSDNLASPSSTLSLASDARRSSSKFKDENSPVGSRAELTQGVMTPDEM
DLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPENSKTQIQNLENDIQEKQRQMKSLEQRITESG
EASIANASSIEMQEKVMRLMTQCNEKSFELEIISADNRILQEQLQTKCTENNELHEKVHLLEQR
LSSQKATLSCCDVVTEEYVDELKKKVQSQEIENEKLKLEHVQSVEEKSGLRVQNQKLAEEASYA
KELASAAAIELKNLADEVTKLSLQNAKLEKELVAARDLAAAAQKRNNNSMNSAANRNGTRPGRK
ARISDSWNLNQENLTMELQARKQREAVLEAALAEKEYIEEEFRKKAEEAKRREEALENDLANMW
VLVAKLKKANSGALSIQKSDEAEPAKEDEVTELDNKNEQNAILKERQLVNGHEEVIVAKAEETP
KEEPLVARLK(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	9145536-9148092(+)
Potential amino acid sequence	MQSRLEEEEEAKAALMSRIQKLTKLILVSTKNSIPGYLGDTPAHSRSISAGKDDKLDSLLLDSD NLASPSSTLSLASDARRSSSKFKDENSPVGSRAELTQGVMTPDEMDLLVEQVKMLAGEIAFGTS TLKRLVDQSMNDPENSKTQIQNLENDIQEKQRQMKSLEQRITESGEASIANASSIEMQEKVMRL MTQCNEKSFELEIISADNRILQEQLQTKCTENNELHEKVHLLEQRLSSQKATLSCCDVVTEEYV DELKKKVQSQEIENEKLKLEHVQSVEEKSGLRVQNQKLAEEASYAKELASAAAIELKNLADEVT KLSLQNAKLEKELVAARDLAAAAQKRNNNSMNSAANRNGTRPGRKARISDSWNLNQENLTMELQ ARKQREAVLEAALAEKEYIEEEFRKKAEEAKRREEALENDLANMWVLVAKLKKANSGALSIQKS DEAEPAKEDEVTELDNKNEQNAILKERQLVNGHEEVIVAKAEETPKEEPLVARLKVIGKLTEGK TTHVPFRDSKLTRLLQSSLSGHGHVSLICTVTPASSSTEETHNTLKFASRAKRIEINASRNKII DEKSLIKKYQKEISTLKVELDQLRRGVLVGVSHEELLSLKQQLQEGQVKMQSRLEEEEEAKAAL MSRIQKLTKLILVSTKNSIPGYLGDTPAHSRSISAGKDDKLDSLLLDSDNLASPSSTLSLASDA RRSSSKFKDENSPVGSRAELTQGVMTPDEMDLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPEN SKTQIQNLENDIQEKQRQMKSLEQRITESGEASIANASSIEMQEKVMRLMTQCNEKSFELEIIS ADNRILQEQLQTKCTENNELHEKVHLLEQRLSSQKATLSCCDVVTEEYVDELKKKVQSQEIENE KLKLEHVQSVEEKSGLRVQNQKLAEEASYAKELASAAAIELKNLADEVTKLSLQNAKLEKELVA ARDLAAAAQKRNNNSMNSAANRNGTRPGRKARISDSWNLNQENLTMELQARKQREAVLEAALAE KEYIEEEFRKKAEEAKRREEALENDLANMWVLVAKLKKANSGALSIQKSDEAEPAKEDEVTELD NKNEQNAILKERQLVNGHEEVIVAKAEETPKEEPLVARLKVIGKLTEGKTTHVPFRDSKLTRLL QSSLSGHGHVSLICTVTPASSSTEETHNTLKFASRAKRIEINASRNKIIDEKSLIKKYQKEIST LKVELDQLRRGVLVGVSHEELLSLKQQLQEGQVKMQSRLEEEEEAKAALMSRIQKLTKLILVST KNSIPGYLGDTPAHSRSISAGKDDKLDSLLLDSDNLASPSSTLSLASDARRSSSKFKDENSPVG SRAELTQGVMTPDEMDLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPENSKTQIQNLENDIQEK QRQMKSLEQRITESGEASIANASSIEMQEKVMRLMTQCNEKSFELEIISADNRILQEQLQTKCT ENNELHEKVHLLEQRLSSQKATLSCCDVVTEEYVDELKKKVQSQEIENEKLKLEHVQSVEEKSG LRVQNQKLAEEASYAKELASAAAIELKNLADEVTKLSLQNAKLEKELVAARDLAAAAQKRNNNS MNSAANRNGTRPGRKARISDSWNLNQENLTMELQARKQREAVLEAALAEKEYIEEEFRKKAEEA KRREEALENDLANMWVLVAKLKKANSGALSIQKSDEAEPAKEDEVTELDNKNEQNAILKERQLV NGHEEVIVAKAEETPKEEPLVARLKVIGKLTEGKTTHVPFRDSKLTRLLQSSLSGHGHVSLICT VTPASSSTEETHNTLKFASRAKRIEINASRNKIIDEKSLIKKYQKEISTLKVELDQLRRGVLVG VSHEELLSLKQQLQEGQVKMQSRLEEEEEAKAALMSRIQKLTKLILVSTKNSIPGYLGDTPAHS RSISAGKDDKLDSLLLDSDNLASPSSTLSLASDARRSSSKFKDENSPVGSRAELTQGVMTPDEM DLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPENSKTQIQNLENDIQEKQRQMKSLEQRITESG EASIANASSIEMQEKVMRLMTQCNEKSFELEIISADNRILQEQLQTKCTENNELHEKVHLLEQR LSSQKATLSCCDVVTEEYVDELKKKVQSQEIENEKLKLEHVQSVEEKSGLRVQNQKLAEEASYA KELASAAAIELKNLADEVTKLSLQNAKLEKELVAARDLAAAAQKRNNNSMNSAANRNGTRPGRK ARISDSWNLNQENLTMELQARKQREAVLEAALAEKEYIEEEFRKKAEEAKRREEALENDLANMW VLVAKLKKANSGALSIQKSDEAEPAKEDEVTELDNKNEQNAILKERQLVNGHEEVIVAKAEETP KEEPLVARLK(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT2G21380_circ_g.11

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