Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d025323_circ_g.1 |
ID in PlantcircBase | zma_circ_003215 |
Alias | circ1517 |
Organism | Zea mays |
Position | chr10: 114056575-114056938 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d025323 |
Parent gene annotation |
Probable protein phosphatase 2C 40 |
Parent gene strand | - |
Alternative splicing | Zm00001d025323_circ_g.2 |
Support reads | 6 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-AA |
Number of exons covered | Zm00001d025323_T008:2 Zm00001d025323_T006:1 Zm00001d025323_T001:2 Zm00001d025323_T004:2 Zm00001d025323_T011:2 Zm00001d025323_T010:2 Zm00001d025323_T012:1 Zm00001d025323_T007:2 Zm00001d025323_T003:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.116758242 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |