Plant Circular RNA Database

Detail information of Zm00001d052282_circ_g.3

			
				
						 General Information
					

				
						CircRNA Name
						Zm00001d052282_circ_g.3
					

						ID in PlantcircBase
						zma_circ_008177
					

						Alias
						Zm04circ00078
					

						Organism
						
							Zea mays						
					

						Position
						
							chr4: 185943528-185946532  JBrowse»						
					

						Reference genome
						
							AGPv4.38						
					

						Type  
						
							u-circRNA							
									
								

					

						Identification method
						CIRI2
					

						Parent gene
						
							Zm00001d052282						
					

						Parent gene annotation
						
							Nuclear-pore anchor
							
					

						Parent gene strand
						+
					

						Alternative splicing
						
							Zm00001d052282_circ_g.2 						
					

						Support reads
						NA
					

						Tissues
						leaf, endosperm
					

						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

					

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

					

						Number of exons covered
						Zm00001d052282_T045:11
Zm00001d052282_T030:11
Zm00001d052282_T054:11
Zm00001d052282_T084:11
Zm00001d052282_T082:11
Zm00001d052282_T058:11
Zm00001d052282_T061:11
Zm00001d052282_T017:11
Zm00001d052282_T088:11
Zm00001d052282_T019:11
Zm00001d052282_T077:11
Zm00001d052282_T001:11
Zm00001d052282_T051:11
Zm00001d052282_T064:11
Zm00001d052282_T013:10
Zm00001d052282_T042:11
Zm00001d052282_T052:10
Zm00001d052282_T057:11
Zm00001d052282_T007:11
Zm00001d052282_T092:11
Zm00001d052282_T093:11
Zm00001d052282_T095:11
Zm00001d052282_T091:11
Zm00001d052282_T074:10
Zm00001d052282_T079:11
Zm00001d052282_T004:11
Zm00001d052282_T025:11
Zm00001d052282_T006:11
Zm00001d052282_T086:11
Zm00001d052282_T047:11
Zm00001d052282_T066:10
Zm00001d052282_T069:11
Zm00001d052282_T005:11
Zm00001d052282_T080:11
Zm00001d052282_T063:11
Zm00001d052282_T036:11
Zm00001d052282_T089:11
Zm00001d052282_T002:10
Zm00001d052282_T024:11
Zm00001d052282_T041:11
Zm00001d052282_T097:11
Zm00001d052282_T034:11
Zm00001d052282_T070:11
Zm00001d052282_T029:11
Zm00001d052282_T072:11
Zm00001d052282_T038:11
Zm00001d052282_T015:11
Zm00001d052282_T090:11
Zm00001d052282_T003:10
Zm00001d052282_T049:11
Zm00001d052282_T040:11

					

			
		

General Information
CircRNA Name	Zm00001d052282_circ_g.3
ID in PlantcircBase	zma_circ_008177
Alias	Zm04circ00078
Organism	Zea mays
Position	chr4: 185943528-185946532 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d052282
Parent gene annotation	Nuclear-pore anchor
Parent gene strand	+
Alternative splicing	Zm00001d052282_circ_g.2
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d052282_T045:11 Zm00001d052282_T030:11 Zm00001d052282_T054:11 Zm00001d052282_T084:11 Zm00001d052282_T082:11 Zm00001d052282_T058:11 Zm00001d052282_T061:11 Zm00001d052282_T017:11 Zm00001d052282_T088:11 Zm00001d052282_T019:11 Zm00001d052282_T077:11 Zm00001d052282_T001:11 Zm00001d052282_T051:11 Zm00001d052282_T064:11 Zm00001d052282_T013:10 Zm00001d052282_T042:11 Zm00001d052282_T052:10 Zm00001d052282_T057:11 Zm00001d052282_T007:11 Zm00001d052282_T092:11 Zm00001d052282_T093:11 Zm00001d052282_T095:11 Zm00001d052282_T091:11 Zm00001d052282_T074:10 Zm00001d052282_T079:11 Zm00001d052282_T004:11 Zm00001d052282_T025:11 Zm00001d052282_T006:11 Zm00001d052282_T086:11 Zm00001d052282_T047:11 Zm00001d052282_T066:10 Zm00001d052282_T069:11 Zm00001d052282_T005:11 Zm00001d052282_T080:11 Zm00001d052282_T063:11 Zm00001d052282_T036:11 Zm00001d052282_T089:11 Zm00001d052282_T002:10 Zm00001d052282_T024:11 Zm00001d052282_T041:11 Zm00001d052282_T097:11 Zm00001d052282_T034:11 Zm00001d052282_T070:11 Zm00001d052282_T029:11 Zm00001d052282_T072:11 Zm00001d052282_T038:11 Zm00001d052282_T015:11 Zm00001d052282_T090:11 Zm00001d052282_T003:10 Zm00001d052282_T049:11 Zm00001d052282_T040:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AAGAACTCTGGAAAAGGAAAGAGATGATAACAAGAAAGAGAAGGCAAAGAGTAGGAGGAATGAG
AACACAATCTTTGGTGCACTTCAGAAGGTGCAACAGaatagaattctacacaatcagttagaag
ctttacacattcggttagccgagaaagaacggaatattgctgggctttcatcacatcgtactga
taattcac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1086
Transcript exons: 185943528-185943683,185943765-185943818,185944391-185944
504,185944638-185944715,185944798-185944947,185945198-18
5945269,185945726-185945872,185945951-185946004,18594609
4-185946181,185946291-185946355,185946425-185946532
AATAGAATTCTACACAATCAGTTAGAAGCTTTACACATTCGGTTAGCCGAGAAAGAACGGAATA
TTGCTGGGCTTTCATCACATCGTACTGATAATTCACATGCAGAAGATGATCTACAAAGTGTCAT
CAGTTATCTGCGCAGATCGAAAGAAATAGCCGAAACAGAGATATCATTGCTTAAACAGGAGAAG
TCTCGGCTTCAGATAGAACTGGAAAGTTCTTTAAAGTCTGCCAAGGAGGCACAGGACTTGTTGC
GAAGTCAAGCTGATAGTGCCAGGGCATTGATGTTCAAGGATGAAGAGTTCAAGTCACTGCAGAT
TCAGGTCAGAGAAATTAACTTGCTTCGTGAAAGCAACATACAACTTAGGGAGGAGAACAGGCAC
AATTTTGAAGAATGCCAGAAATTCCGTGAAGAAGCTCAAAAGGCTAAAATGGAATCTGAGAGGT
TGCAGAACCTTCTACTGGAGAAGGAGGTAGACGCTGAAATGTGCAAAAGAGAACTGGAAATGCA
GAAGGCAGAAATAGCTAATCTCAACCAAAGTATTTCTGAGCTGATTGAAAATAGCAAAGGCATT
GATTTGAACACTTATGAAGCCATGAAGAATGAACTTCAAAATATCAAATCAACCTTGAGAGAGA
ATTCTATGGAGCTTGAAAGTGCAAAGATACTGCTTTCTGAGAAAGAAGTTGCCATAAAAATTTT
GGAGGATAAGCTTTCATTATGTCAATCTGAATTGGATTCCAAGGAAAAGAAGCTGAATGATGTA
GAGGCGTCCCTTAAATCTGAGATTGACAAGCATAAGAAGATTAATTTAAACTTAAAGAGAAAGC
ATGACAATTTGATGAAGGAGAAGGGAGAGATTGCTAAAGAAAATCAAAGCCTTGTAAAGCAGAT
GGAGGATCTTAAATCAACTCAGAAGACAACATCTGAAACAACACTTGAGCAGGCTATTAAAGAA
AAGGATTTCAGGATACAGACATTAGAAAGAACTCTGGAAAAGGAAAGAGATGATAACAAGAAAG
AGAAGGCAAAGAGTAGGAGGAATGAGAACACAATCTTTGGTGCACTTCAGAAGGTGCAACAG
						
					

						Genomic sequence
						
							AATAGAATTCTACACAATCAGTTAGAAGCTTTACACATTCGGTTAGCCGAGAAAGAACGGAATA
TTGCTGGGCTTTCATCACATCGTACTGATAATTCACATGCAGAAGATGATCTACAAAGTGTCAT
CAGTTATCTGCGCAGATCGAAAGAAATAGTAAGCATTGGATTTGGAGGCTTTGTCTAGTATTCA
GTTTGCACTAGATGTGGTTCTTATTCAGCCTATTGACTATTTCAGGCCGAAACAGAGATATCAT
TGCTTAAACAGGAGAAGTCTCGGCTTCAGATAGAAGTATGTTATGCTAGCACCTGGCAACCTGC
CCTGCATTTGTCCTTATTCAAAATGCTTTTGAATTTAAAAATATAAGATTCCATGAGGACCATC
TATTGCTGGTTAAAAAACTGCAGCACATTCTGCCAGATGCAATATGCCATGTTGACCATATAAT
TAAAAAGTTGTTCGATTTCTGTTTGATAAACTGTGCATTGGTTCAGTGTCGTAGGATCTATGAT
TTTTTTTTGCTGTGCGTCATGTTGCCTTCTAGTTGGTGTCAAAACACCAGCTCTACTGGCAATT
GTTTGTTTAAATTGACGCCTCCCTAATAATAGCCAATTTGCTCTGGAAACGGTGTTATCTGCTA
TATGCGTACATGCTCTGAAATTGATGACCCTTTTTAATTCATCTGTCTTCAAGGAAAGGGGGTT
TTTTATAGACTAAATTCGGAATGTTTGGTTGGGACTTTTGTGTTAGAAGTAGTATTTGATGGAG
CATGTGAACCTCCATTGTAGTTTACTTTACAAACTTTTTTGGTTGAATGTATTGATGTCTCTAA
TTTCATATGTTTCTTTATAATGGTAATACAGCTGGAAAGTTCTTTAAAGTCTGCCAAGGAGGCA
CAGGACTTGTTGCGAAGTCAAGCTGATAGTGCCAGGGCATTGATGTTCAAGGATGAAGAGTTCA
AGTCACTGCAGATTCAGGTGCAATTCAATTGTTGGGATTAGTTGATCACATAGCTATGTCGCAT
TGCTATGTTGCTTTGACCTGGTTATTGAGTGTATTTTAGCCTTATTACCTTATTTATTGTTTTT
TATTTGAAATGACCGACCTCAGGTCAGAGAAATTAACTTGCTTCGTGAAAGCAACATACAACTT
AGGGAGGAGAACAGGCACAATTTTGAAGAATGCCAGGTAATATATTAAATTGGTAATGTTTAAT
TGCTGGTTCATATCTGGATGTGCATAATTTTTTATTTTAATTTTGTGCGTTCAGAAATTCCGTG
AAGAAGCTCAAAAGGCTAAAATGGAATCTGAGAGGTTGCAGAACCTTCTACTGGAGAAGGAGGT
AGACGCTGAAATGTGCAAAAGAGAACTGGAAATGCAGAAGGCAGAAATAGCTAATCTCAACCAA
AGTATTTCTGAGGTAAGTTTTAGTCCACTTTCTAACAGTAATGATAAAATGCCATGAAATTCCT
TTGGCTTCATTAAGAACAGCAGCTGTGGTTTTTGTCCCAAGCAAGTTTTAGTCTGTTGGTTTGT
AATATGCAGGTTATTGCCATAAAAAAATTGTAAACATTGTGAGAAAACAATATGTGCATAAAAA
TCTATATATTAATTCATTCTATTCTTCATATGTTGAGTTCTGCAGTTGTGTATTAATGTTTTCT
TGGCAGCTGATTGAAAATAGCAAAGGCATTGATTTGAACACTTATGAAGCCATGAAGAATGAAC
TTCAAAATATCAAAGTTAGTCTTCTGTTTTCCTCTTCGTTTTTCTTTGTGATGATGCCATTTTG
AATGTTTCTTGGTCAATGATGTATACATGATTGGATTTCTTTTTCTGCACAAAAGAGTTTGATG
ACTGTCATTTTTGTCTAGTTTGACTAAACATTTGATGAATCACTATAGTGTCTTGTTTCCCTAT
TTTGTACCAAATATTTTTGTACCACTTTATTTTCTTTGCTGTGAGTTTGTGACATAAACTGTAT
GAGCTTCTGCACTGTACTCTGTATTACGATTATTGTTATCTTTTGGATGGATGCTTGCTTTGGG
TGAAAGTGATGGCGCAAGTCTCTAACTGTACATGAGTCATTAAGTGTCTAATTTCATTAGTTGT
ATGATATTGGATTTGCTTGACTTTTTTGGGTCATAGTTTAATCGTCTTACTATCACATACATTA
ACATAATTATCGTTTTCAACAGTCAACCTTGAGAGAGAATTCTATGGAGCTTGAAAGTGCAAAG
ATACTGCTTTCTGAGAAAGAAGTTGCCATAAAAATTTTGGAGGATAAGCTTTCATTATGTCAAT
CTGAATTGGATTCCAAGGAAAAGAAGCTGAATGATGTAGAGGTGATAATAGTTCCAACTTTCAT
GACTAATATATTAACTAATTCGCTGTAGTACTTATATTTTTTTGTCCTATTGTAGGCGTCCCTT
AAATCTGAGATTGACAAGCATAAGAAGATTAATTTAAACTTAAAGGTTTGGTTTTTTTTCACTT
AGTTGCAATATTGAATTTCTATTTTCTATTTTGTTTATTCATGTGTCTTCTCCCATTTTAAATG
TTCCAGAGAAAGCATGACAATTTGATGAAGGAGAAGGGAGAGATTGCTAAAGAAAATCAAAGCC
TTGTAAAGCAGATGGAGGATCTTAAATCAAGTACTTCCACGCTGTTCCTTGTTCCGTTGCATCT
TATTCTTTCCCACTTGAGCAAACTTTTGAATAGTTTCATACTAGTTGCTGCAAATCTAATAATA
TACTTTAGCAGCTCAGAAGACAACATCTGAAACAACACTTGAGCAGGCTATTAAAGAAAAGGAT
TTCAGGATACAGGTTAGCACGTTTTGCTTAAATGGTACACAAAAATATTCTTGAGCCTTTAACA
TAAACATATATTAACAGACATTAGAAAGAACTCTGGAAAAGGAAAGAGATGATAACAAGAAAGA
GAAGGCAAAGAGTAGGAGGAATGAGAACACAATCTTTGGTGCACTTCAGAAGGTGCAACAG
						
					

			
		

Sequences
Splice junction sequence	AAGAACTCTGGAAAAGGAAAGAGATGATAACAAGAAAGAGAAGGCAAAGAGTAGGAGGAATGAG AACACAATCTTTGGTGCACTTCAGAAGGTGCAACAGaatagaattctacacaatcagttagaag ctttacacattcggttagccgagaaagaacggaatattgctgggctttcatcacatcgtactga taattcac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1086 Transcript exons: 185943528-185943683,185943765-185943818,185944391-185944 504,185944638-185944715,185944798-185944947,185945198-18 5945269,185945726-185945872,185945951-185946004,18594609 4-185946181,185946291-185946355,185946425-185946532 AATAGAATTCTACACAATCAGTTAGAAGCTTTACACATTCGGTTAGCCGAGAAAGAACGGAATA TTGCTGGGCTTTCATCACATCGTACTGATAATTCACATGCAGAAGATGATCTACAAAGTGTCAT CAGTTATCTGCGCAGATCGAAAGAAATAGCCGAAACAGAGATATCATTGCTTAAACAGGAGAAG TCTCGGCTTCAGATAGAACTGGAAAGTTCTTTAAAGTCTGCCAAGGAGGCACAGGACTTGTTGC GAAGTCAAGCTGATAGTGCCAGGGCATTGATGTTCAAGGATGAAGAGTTCAAGTCACTGCAGAT TCAGGTCAGAGAAATTAACTTGCTTCGTGAAAGCAACATACAACTTAGGGAGGAGAACAGGCAC AATTTTGAAGAATGCCAGAAATTCCGTGAAGAAGCTCAAAAGGCTAAAATGGAATCTGAGAGGT TGCAGAACCTTCTACTGGAGAAGGAGGTAGACGCTGAAATGTGCAAAAGAGAACTGGAAATGCA GAAGGCAGAAATAGCTAATCTCAACCAAAGTATTTCTGAGCTGATTGAAAATAGCAAAGGCATT GATTTGAACACTTATGAAGCCATGAAGAATGAACTTCAAAATATCAAATCAACCTTGAGAGAGA ATTCTATGGAGCTTGAAAGTGCAAAGATACTGCTTTCTGAGAAAGAAGTTGCCATAAAAATTTT GGAGGATAAGCTTTCATTATGTCAATCTGAATTGGATTCCAAGGAAAAGAAGCTGAATGATGTA GAGGCGTCCCTTAAATCTGAGATTGACAAGCATAAGAAGATTAATTTAAACTTAAAGAGAAAGC ATGACAATTTGATGAAGGAGAAGGGAGAGATTGCTAAAGAAAATCAAAGCCTTGTAAAGCAGAT GGAGGATCTTAAATCAACTCAGAAGACAACATCTGAAACAACACTTGAGCAGGCTATTAAAGAA AAGGATTTCAGGATACAGACATTAGAAAGAACTCTGGAAAAGGAAAGAGATGATAACAAGAAAG AGAAGGCAAAGAGTAGGAGGAATGAGAACACAATCTTTGGTGCACTTCAGAAGGTGCAACAG
Genomic sequence	AATAGAATTCTACACAATCAGTTAGAAGCTTTACACATTCGGTTAGCCGAGAAAGAACGGAATA TTGCTGGGCTTTCATCACATCGTACTGATAATTCACATGCAGAAGATGATCTACAAAGTGTCAT CAGTTATCTGCGCAGATCGAAAGAAATAGTAAGCATTGGATTTGGAGGCTTTGTCTAGTATTCA GTTTGCACTAGATGTGGTTCTTATTCAGCCTATTGACTATTTCAGGCCGAAACAGAGATATCAT TGCTTAAACAGGAGAAGTCTCGGCTTCAGATAGAAGTATGTTATGCTAGCACCTGGCAACCTGC CCTGCATTTGTCCTTATTCAAAATGCTTTTGAATTTAAAAATATAAGATTCCATGAGGACCATC TATTGCTGGTTAAAAAACTGCAGCACATTCTGCCAGATGCAATATGCCATGTTGACCATATAAT TAAAAAGTTGTTCGATTTCTGTTTGATAAACTGTGCATTGGTTCAGTGTCGTAGGATCTATGAT TTTTTTTTGCTGTGCGTCATGTTGCCTTCTAGTTGGTGTCAAAACACCAGCTCTACTGGCAATT GTTTGTTTAAATTGACGCCTCCCTAATAATAGCCAATTTGCTCTGGAAACGGTGTTATCTGCTA TATGCGTACATGCTCTGAAATTGATGACCCTTTTTAATTCATCTGTCTTCAAGGAAAGGGGGTT TTTTATAGACTAAATTCGGAATGTTTGGTTGGGACTTTTGTGTTAGAAGTAGTATTTGATGGAG CATGTGAACCTCCATTGTAGTTTACTTTACAAACTTTTTTGGTTGAATGTATTGATGTCTCTAA TTTCATATGTTTCTTTATAATGGTAATACAGCTGGAAAGTTCTTTAAAGTCTGCCAAGGAGGCA CAGGACTTGTTGCGAAGTCAAGCTGATAGTGCCAGGGCATTGATGTTCAAGGATGAAGAGTTCA AGTCACTGCAGATTCAGGTGCAATTCAATTGTTGGGATTAGTTGATCACATAGCTATGTCGCAT TGCTATGTTGCTTTGACCTGGTTATTGAGTGTATTTTAGCCTTATTACCTTATTTATTGTTTTT TATTTGAAATGACCGACCTCAGGTCAGAGAAATTAACTTGCTTCGTGAAAGCAACATACAACTT AGGGAGGAGAACAGGCACAATTTTGAAGAATGCCAGGTAATATATTAAATTGGTAATGTTTAAT TGCTGGTTCATATCTGGATGTGCATAATTTTTTATTTTAATTTTGTGCGTTCAGAAATTCCGTG AAGAAGCTCAAAAGGCTAAAATGGAATCTGAGAGGTTGCAGAACCTTCTACTGGAGAAGGAGGT AGACGCTGAAATGTGCAAAAGAGAACTGGAAATGCAGAAGGCAGAAATAGCTAATCTCAACCAA AGTATTTCTGAGGTAAGTTTTAGTCCACTTTCTAACAGTAATGATAAAATGCCATGAAATTCCT TTGGCTTCATTAAGAACAGCAGCTGTGGTTTTTGTCCCAAGCAAGTTTTAGTCTGTTGGTTTGT AATATGCAGGTTATTGCCATAAAAAAATTGTAAACATTGTGAGAAAACAATATGTGCATAAAAA TCTATATATTAATTCATTCTATTCTTCATATGTTGAGTTCTGCAGTTGTGTATTAATGTTTTCT TGGCAGCTGATTGAAAATAGCAAAGGCATTGATTTGAACACTTATGAAGCCATGAAGAATGAAC TTCAAAATATCAAAGTTAGTCTTCTGTTTTCCTCTTCGTTTTTCTTTGTGATGATGCCATTTTG AATGTTTCTTGGTCAATGATGTATACATGATTGGATTTCTTTTTCTGCACAAAAGAGTTTGATG ACTGTCATTTTTGTCTAGTTTGACTAAACATTTGATGAATCACTATAGTGTCTTGTTTCCCTAT TTTGTACCAAATATTTTTGTACCACTTTATTTTCTTTGCTGTGAGTTTGTGACATAAACTGTAT GAGCTTCTGCACTGTACTCTGTATTACGATTATTGTTATCTTTTGGATGGATGCTTGCTTTGGG TGAAAGTGATGGCGCAAGTCTCTAACTGTACATGAGTCATTAAGTGTCTAATTTCATTAGTTGT ATGATATTGGATTTGCTTGACTTTTTTGGGTCATAGTTTAATCGTCTTACTATCACATACATTA ACATAATTATCGTTTTCAACAGTCAACCTTGAGAGAGAATTCTATGGAGCTTGAAAGTGCAAAG ATACTGCTTTCTGAGAAAGAAGTTGCCATAAAAATTTTGGAGGATAAGCTTTCATTATGTCAAT CTGAATTGGATTCCAAGGAAAAGAAGCTGAATGATGTAGAGGTGATAATAGTTCCAACTTTCAT GACTAATATATTAACTAATTCGCTGTAGTACTTATATTTTTTTGTCCTATTGTAGGCGTCCCTT AAATCTGAGATTGACAAGCATAAGAAGATTAATTTAAACTTAAAGGTTTGGTTTTTTTTCACTT AGTTGCAATATTGAATTTCTATTTTCTATTTTGTTTATTCATGTGTCTTCTCCCATTTTAAATG TTCCAGAGAAAGCATGACAATTTGATGAAGGAGAAGGGAGAGATTGCTAAAGAAAATCAAAGCC TTGTAAAGCAGATGGAGGATCTTAAATCAAGTACTTCCACGCTGTTCCTTGTTCCGTTGCATCT TATTCTTTCCCACTTGAGCAAACTTTTGAATAGTTTCATACTAGTTGCTGCAAATCTAATAATA TACTTTAGCAGCTCAGAAGACAACATCTGAAACAACACTTGAGCAGGCTATTAAAGAAAAGGAT TTCAGGATACAGGTTAGCACGTTTTGCTTAAATGGTACACAAAAATATTCTTGAGCCTTTAACA TAAACATATATTAACAGACATTAGAAAGAACTCTGGAAAAGGAAAGAGATGATAACAAGAAAGA GAAGGCAAAGAGTAGGAGGAATGAGAACACAATCTTTGGTGCACTTCAGAAGGTGCAACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.021401744

Conservation Information
Conserved circRNAs	NA
PMCS	0.021401744

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							185944467-185946529(+)
185946457-185943549(+)
185943608-185946347(-)
						
					

						Potential amino acid sequence
						
							MFKDEEFKSLQIQVREINLLRESNIQLREENRHNFEECQKFREEAQKAKMESERLQNLLLEKEV
DAEMCKRELEMQKAEIANLNQSISELIENSKGIDLNTYEAMKNELQNIKSTLRENSMELESAKI
LLSEKEVAIKILEDKLSLCQSELDSKEKKLNDVEASLKSEIDKHKKINLNLKRKHDNLMKEKGE
IAKENQSLVKQMEDLKSTQKTTSETTLEQAIKEKDFRIQTLERTLEKERDDNKKEKAKSRRNEN
TIFGALQKVQQNRILHNQLEALHIRLAEKERNIAGLSSHRTDNSHAEDDLQSVISYLRRSKEIA
ETEISLLKQEKSRLQIELESSLKSAKEAQDLLRSQADSARALMFKDEEFKSLQIQVREINLLRE
SNIQLREENRHNFEECQKFREEAQKAKMESERLQNLLLEKEVDAEMCKRELEMQKAEIANLNQS
ISELIENSKGIDLNTYEAMKNELQNIKSTLRENSMELESAKILLSEKEVAIKILEDKLSLCQSE
LDSKEKKLNDVEASLKSEIDKHKKINLNLKRKHDNLMKEKGEIAKENQSLVKQMEDLKSTQKTT
SETTLEQAIKEKDFRIQTLERTLEKERDDNKKEKAKSRRNENTIFGALQKVQQNRILHNQLEAL
HIRLAEKERNIAGLSSHRTDNSHAEDDLQSVISYLRRSKEIAETEISLLKQEKSRLQIELESSL
KSAKEAQDLLRSQADSARALMFKDEEFKSLQIQVREINLLRESNIQLREENRHNFEECQKFREE
AQKAKMESERLQNLLLEKEVDAEMCKRELEMQKAEIANLNQSISELIENSKGIDLNTYEAMKNE
LQNIKSTLRENSMELESAKILLSEKEVAIKILEDKLSLCQSELDSKEKKLNDVEASLKSEIDKH
KKINLNLKRKHDNLMKEKGEIAKENQSLVKQMEDLKSTQKTTSETTLEQAIKEKDFRIQTLERT
LEKERDDNKKEKAKSRRNENTIFGALQKVQQNRILHNQLEALHIRLAEKERNIAGLSSHRTDNS
HAEDDLQSVISYLRRSKEIAETEISLLKQEKSRLQIELESSLKSAKEAQDLLRSQADSARALMF
KDEEFKSLQIQVREINLLRESNIQLREENRHNFEECQKFREEAQKAKMESERLQNLLLEKEVDA
EMCKRELEMQKAEIANLNQSISELIENSKGIDLNTYEAMKNELQNIKSTLRENSMELESAKILL
SEKEVAIKILEDKLSLCQSELDSKEKKLNDVEASLKSEIDKHKKINLNLKRKHDNLMKEKGEIA
KENQSLVKQMEDLKSTQKTTSETTLEQAIKEKDFRIQTLERTLEKERDDNKKEKAKSRRNENTI
FGALQKVQQ(+)
MITRKRRQRVGGMRTQSLVHFRRCNRIEFYTIS*(+)
MKAQQYSVLSRLTECVKLLTDCVEFYSVAPSEVHQRLCSHSSYSLPSLSCYHLFPFPEFFLMSV
S*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	185944467-185946529(+) 185946457-185943549(+) 185943608-185946347(-)
Potential amino acid sequence	MFKDEEFKSLQIQVREINLLRESNIQLREENRHNFEECQKFREEAQKAKMESERLQNLLLEKEV DAEMCKRELEMQKAEIANLNQSISELIENSKGIDLNTYEAMKNELQNIKSTLRENSMELESAKI LLSEKEVAIKILEDKLSLCQSELDSKEKKLNDVEASLKSEIDKHKKINLNLKRKHDNLMKEKGE IAKENQSLVKQMEDLKSTQKTTSETTLEQAIKEKDFRIQTLERTLEKERDDNKKEKAKSRRNEN TIFGALQKVQQNRILHNQLEALHIRLAEKERNIAGLSSHRTDNSHAEDDLQSVISYLRRSKEIA ETEISLLKQEKSRLQIELESSLKSAKEAQDLLRSQADSARALMFKDEEFKSLQIQVREINLLRE SNIQLREENRHNFEECQKFREEAQKAKMESERLQNLLLEKEVDAEMCKRELEMQKAEIANLNQS ISELIENSKGIDLNTYEAMKNELQNIKSTLRENSMELESAKILLSEKEVAIKILEDKLSLCQSE LDSKEKKLNDVEASLKSEIDKHKKINLNLKRKHDNLMKEKGEIAKENQSLVKQMEDLKSTQKTT SETTLEQAIKEKDFRIQTLERTLEKERDDNKKEKAKSRRNENTIFGALQKVQQNRILHNQLEAL HIRLAEKERNIAGLSSHRTDNSHAEDDLQSVISYLRRSKEIAETEISLLKQEKSRLQIELESSL KSAKEAQDLLRSQADSARALMFKDEEFKSLQIQVREINLLRESNIQLREENRHNFEECQKFREE AQKAKMESERLQNLLLEKEVDAEMCKRELEMQKAEIANLNQSISELIENSKGIDLNTYEAMKNE LQNIKSTLRENSMELESAKILLSEKEVAIKILEDKLSLCQSELDSKEKKLNDVEASLKSEIDKH KKINLNLKRKHDNLMKEKGEIAKENQSLVKQMEDLKSTQKTTSETTLEQAIKEKDFRIQTLERT LEKERDDNKKEKAKSRRNENTIFGALQKVQQNRILHNQLEALHIRLAEKERNIAGLSSHRTDNS HAEDDLQSVISYLRRSKEIAETEISLLKQEKSRLQIELESSLKSAKEAQDLLRSQADSARALMF KDEEFKSLQIQVREINLLRESNIQLREENRHNFEECQKFREEAQKAKMESERLQNLLLEKEVDA EMCKRELEMQKAEIANLNQSISELIENSKGIDLNTYEAMKNELQNIKSTLRENSMELESAKILL SEKEVAIKILEDKLSLCQSELDSKEKKLNDVEASLKSEIDKHKKINLNLKRKHDNLMKEKGEIA KENQSLVKQMEDLKSTQKTTSETTLEQAIKEKDFRIQTLERTLEKERDDNKKEKAKSRRNENTI FGALQKVQQ(+) MITRKRRQRVGGMRTQSLVHFRRCNRIEFYTIS(+) MKAQQYSVLSRLTECVKLLTDCVEFYSVAPSEVHQRLCSHSSYSLPSLSCYHLFPFPEFFLMSV S(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d052282_circ_g.3

Address

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