Splice junction sequence |
AATTTCCGCATTTGTTTGTGATTTCTGCCAGAAATTTATTGTATTTCTTATACTCAGATGTTTG GACCGCAAGGTGCGAAGTCAGAACCTTGAAGTCAAGgagctgccattgtgtgttgattgggtat caagtaaataagaagcctcgtcttcagatacctcaaaaagttcaacctgccggtagacaagcat taagtcct
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 403 Transcript exons: 6599621-6599790,6600164-6600273,6600528-6600607,6600694- 6600736 GAGCTGCCATTGTGTGTTGATTGGGTATCAAGTAAATAAGAAGCCTCGTCTTCAGATACCTCAA AAAGTTCAACCTGCCGGTAGACAAGCATTAAGTCCTCCTCCAGGCTTCCAAGCAGTTTTTCCAC AAGGAAATACAACATCTCTCCCTAGAGTTTCAACTCAGCCAGTGCTGTTGGAGAAGAGGAAAGA ACATCCTGATTCTGTTGCAAGTGCAGCGTTAAAAAGAAAGGTTGGGAATGATGACTTTACTGTC CCGGGGCATATTCGGGTTGAACAGTTTATTCATGGATCAGCAAGTCAGTCACAAGATATTGAAA CTGTCAAGTTGATGGAAGAAAACAAGAAGCTCCGAGCAAAATGTTTGGACCGCAAGGTGCGAAG TCAGAACCTTGAAGTCAAG
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Genomic sequence |
GAGCTGCCATTGTGTGTTGATTGGGTATCAAGTAAATAAGAAGCCTCGTCTTCAGATACCTCAA AAAGTTCAACCTGCCGGTAGACAAGCATTAAGTCCTCCTCCAGGCTTCCAAGCAGTTTTTCCAC AAGGAAATACAACATCTCTCCCTAGAGTTTCAACTCAGCCAGGTAAATGTAACTAAAACTTGAA CCGTTATGTAAGTGGGATCATAGTTAGTCTTTGACTTGAACAAAACTAGAGTTCTAATATTGGA CTGCCCGGTCTGACCTGGATTGGTCCAGGACTATGCCCAAATTAAGAAACATGAAAATGATAGT GCTGTGAATGCTCTATATAGTGACTGCAACTTGCCGCTTTTTCAACTCACTTACTTAAGAAAAT AGAACAAAATAATCAATATCATCTTACTGTAAAGCTGACACACTTTTCCAAACTGATTGCAAGT GCTTCTGCTATCATTTTGTTGGACGTCGTTTTGTACTGTATATTTCCCCGAACTCTCTCTGATG CTGACTTATGATGGTTTCATTATTATTGCAGTGCTGTTGGAGAAGAGGAAAGAACATCCTGATT CTGTTGCAAGTGCAGCGTTAAAAAGAAAGGTTGGGAATGATGACTTTACTGTCCCGGGGCATAT TCGGGTTGAACAGGTACCTCAATATATGTTTCTTCTCTTTGATTTTCTGTGCAACATGTTTAAC CCCAATACCTAGAGATGCTGACAAAACTGTGGATATTACTGACTAGAGTTTCATCTAAGCGCTG TTTGTGATAAAATATGACATTTCTCTTATGTGATAGCCCATGCACATGTGCCCACATAGAAAAC ATGATAGTAACTTTAGTTTGTGACTGCATCTACCCATTCCGTTTCTCTAACTTCATTGTCTTTT GCACTCTGAAGTTTATTCATGGATCAGCAAGTCAGTCACAAGATATTGAAACTGTCAAGTTGAT GGAAGAAAACAAGAAGCTCCGAGCAAAGTAAGATAAATTATGTAATATATATTGCCAATTTCCG CATTTGTTTGTGATTTCTGCCAGAAATTTATTGTATTTCTTATACTCAGATGTTTGGACCGCAA GGTGCGAAGTCAGAACCTTGAAGTCAAG |